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The map label for this gene is 17228329

Identifier: 17228329

GI number: 17228329

Start: 959601

End: 961136

Strand: Direct

Name: 17228329

Synonym: alr0834

Alternate gene names: NA

Gene position: 959601-961136 (Clockwise)

Preceding gene: 17228326

Following gene: 17228332

Centisome position: 14.96

GC content: 44.99

Gene sequence:

>1536_bases
ATGCTATTTTCTGGCGCTGCTGCCTTTGCAGGAGAAACCCCTGCCATAACAGAAACAAATGAAACCTCAAAAATAGCTAA
TGCAGACCTAGCTACTCAACAAGAGGTAATGTCACAAGTTACCTCAGTTTCTCAGTTTTCTGACGTACAACCCACAGACT
GGGCTTTCCAAGCATTGCAATCACTGGTAGAGCGTTATGGTTGTATTGCAGGATATCCCAATGGGACATACCGTGGTAAT
CGCGCCCTCACAAGATATGAATTTGCCGCAGGCTTGAACGCTTGTCTGGATCGAGTCAACGAATTGATCGCTACTGCCAC
GGCGGAGTTAGTCACAAAAGAAGACTTAGCTACACTACAAAGGCTACAAGAAGAGTTTTCTGCGGAACTAGCAACATTAA
GAGGTCGAGTTGATGCTTTAGAAGCACGTACCTCGGAATTAGAAGCCAATCAATTCTCAACCACAACAAAGCTGCAAGGA
CAAGTAGTATCAGTTATCAGCGATGTCTTATCAGGCGATCGCGTCAATAATGCAGATATCGTCGATACAAATACTACTCT
GGGAGTACGGGCGCGATTAGAACTTGTCTCCAGCTTTACTGGGCGAGATACCTTGTTCACCAGAATTGAAGCTAACAACA
TTACTAGCCCCGACATTAATACTCCAGAAGGTAACCTGTTCTTCGCTAGCGTTGAACCCAGTACTAACGCTGCTATTGGT
ACTTTGTGGTATGGGTTCCCCGTGGGCAAAAATACACAAGCCAAGCTAATTGCCGTTGGAGGTGCAGCAGACGACCTCAC
CAGCACCGTAAACATATTTGATGGAGATGGTGCTTTTGGTGCTTTAACTACCTTTGGTACACGTAACCCGATTTATGGGC
AGATAGGTGGTACTGGTTTGGGTGTCACTCACCAGTTTAGTGATAAATTAGCCTTAAGCTTGGGTTATTTGAGTGGTACA
GCAAATGACCCATCACCCCAGAATGGTTTATTTGACGGCGCTTACGGTGCATTAGCACAACTGACAGTTAGACCAAGCGA
TCGCGTCAGTGTTGGCCTAACATATATCAATTCTTACCGGCAACCCCTAGCCACTGGTAGTAACGCTGCAACCACCTTCC
AAGGTTTAGGCGAAAGATTTTCCAGCAATTCCTACGGTCTCCAAGCTTCTATCGGTCTGAGTGAAAAATTAGTCTTGGGT
GGATGGGCTGGTTACACTAATAGCCGCATCTTGACAGGCGATCGTGGAGACGTTGATATCTGGAACTATGCGGTTACTCT
TGGTTTCCCCGACCTTGGGAAAAAAGGTAACTTAGCCGGTATCATTGCTGGGATGGAACCAAAAGTCACAAGTTCTAGCA
TCGCTGGACTAAATAGAGATAGAGATACTTCCTATCATGTGGAAGCATTTTATCAATACAAAGTCAGTGATAATATCACC
ATCACACCAGGCATTATCTGGCTAACATCACCAGACCACAATGACAATAATGATGATGTTGTTATTGGTGCGTTGAGAAC
CACATTTAGTTTCTAA

Upstream 100 bases:

>100_bases
ATCTATTGCCAAGAAATAAGATGTGTGTGAGTAAATTGTGAGGAGAAAAATGCAGAAAATATGGAAGTATTGGCTGGTTA
ACCCAGTAATTTGCAGCACA

Downstream 100 bases:

>100_bases
TTTCTCCAAACTCACCAAAAAGACGCAAAGTAATTCTTTGCGTCTTTTTTATGGGAAATCAAAAATAGGTAATTGGTAAT
TGGTAATTGGTAATAATTGC

Product: porin; major outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MLFSGAAAFAGETPAITETNETSKIANADLATQQEVMSQVTSVSQFSDVQPTDWAFQALQSLVERYGCIAGYPNGTYRGN
RALTRYEFAAGLNACLDRVNELIATATAELVTKEDLATLQRLQEEFSAELATLRGRVDALEARTSELEANQFSTTTKLQG
QVVSVISDVLSGDRVNNADIVDTNTTLGVRARLELVSSFTGRDTLFTRIEANNITSPDINTPEGNLFFASVEPSTNAAIG
TLWYGFPVGKNTQAKLIAVGGAADDLTSTVNIFDGDGAFGALTTFGTRNPIYGQIGGTGLGVTHQFSDKLALSLGYLSGT
ANDPSPQNGLFDGAYGALAQLTVRPSDRVSVGLTYINSYRQPLATGSNAATTFQGLGERFSSNSYGLQASIGLSEKLVLG
GWAGYTNSRILTGDRGDVDIWNYAVTLGFPDLGKKGNLAGIIAGMEPKVTSSSIAGLNRDRDTSYHVEAFYQYKVSDNIT
ITPGIIWLTSPDHNDNNDDVVIGALRTTFSF

Sequences:

>Translated_511_residues
MLFSGAAAFAGETPAITETNETSKIANADLATQQEVMSQVTSVSQFSDVQPTDWAFQALQSLVERYGCIAGYPNGTYRGN
RALTRYEFAAGLNACLDRVNELIATATAELVTKEDLATLQRLQEEFSAELATLRGRVDALEARTSELEANQFSTTTKLQG
QVVSVISDVLSGDRVNNADIVDTNTTLGVRARLELVSSFTGRDTLFTRIEANNITSPDINTPEGNLFFASVEPSTNAAIG
TLWYGFPVGKNTQAKLIAVGGAADDLTSTVNIFDGDGAFGALTTFGTRNPIYGQIGGTGLGVTHQFSDKLALSLGYLSGT
ANDPSPQNGLFDGAYGALAQLTVRPSDRVSVGLTYINSYRQPLATGSNAATTFQGLGERFSSNSYGLQASIGLSEKLVLG
GWAGYTNSRILTGDRGDVDIWNYAVTLGFPDLGKKGNLAGIIAGMEPKVTSSSIAGLNRDRDTSYHVEAFYQYKVSDNIT
ITPGIIWLTSPDHNDNNDDVVIGALRTTFSF
>Mature_511_residues
MLFSGAAAFAGETPAITETNETSKIANADLATQQEVMSQVTSVSQFSDVQPTDWAFQALQSLVERYGCIAGYPNGTYRGN
RALTRYEFAAGLNACLDRVNELIATATAELVTKEDLATLQRLQEEFSAELATLRGRVDALEARTSELEANQFSTTTKLQG
QVVSVISDVLSGDRVNNADIVDTNTTLGVRARLELVSSFTGRDTLFTRIEANNITSPDINTPEGNLFFASVEPSTNAAIG
TLWYGFPVGKNTQAKLIAVGGAADDLTSTVNIFDGDGAFGALTTFGTRNPIYGQIGGTGLGVTHQFSDKLALSLGYLSGT
ANDPSPQNGLFDGAYGALAQLTVRPSDRVSVGLTYINSYRQPLATGSNAATTFQGLGERFSSNSYGLQASIGLSEKLVLG
GWAGYTNSRILTGDRGDVDIWNYAVTLGFPDLGKKGNLAGIIAGMEPKVTSSSIAGLNRDRDTSYHVEAFYQYKVSDNIT
ITPGIIWLTSPDHNDNNDDVVIGALRTTFSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 54440; Mature: 54440

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSGAAAFAGETPAITETNETSKIANADLATQQEVMSQVTSVSQFSDVQPTDWAFQALQ
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SLVERYGCIAGYPNGTYRGNRALTRYEFAAGLNACLDRVNELIATATAELVTKEDLATLQ
HHHHHCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQEEFSAELATLRGRVDALEARTSELEANQFSTTTKLQGQVVSVISDVLSGDRVNNADI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
VDTNTTLGVRARLELVSSFTGRDTLFTRIEANNITSPDINTPEGNLFFASVEPSTNAAIG
EECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEE
TLWYGFPVGKNTQAKLIAVGGAADDLTSTVNIFDGDGAFGALTTFGTRNPIYGQIGGTGL
EEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEECCCCCCC
GVTHQFSDKLALSLGYLSGTANDPSPQNGLFDGAYGALAQLTVRPSDRVSVGLTYINSYR
CCEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHH
QPLATGSNAATTFQGLGERFSSNSYGLQASIGLSEKLVLGGWAGYTNSRILTGDRGDVDI
HHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCEEEECCCCCEEE
WNYAVTLGFPDLGKKGNLAGIIAGMEPKVTSSSIAGLNRDRDTSYHVEAFYQYKVSDNIT
EEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEEEEEEECCCEE
ITPGIIWLTSPDHNDNNDDVVIGALRTTFSF
ECCCEEEEECCCCCCCCCCEEEEEHHHHCCC
>Mature Secondary Structure
MLFSGAAAFAGETPAITETNETSKIANADLATQQEVMSQVTSVSQFSDVQPTDWAFQALQ
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SLVERYGCIAGYPNGTYRGNRALTRYEFAAGLNACLDRVNELIATATAELVTKEDLATLQ
HHHHHCCCEECCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLQEEFSAELATLRGRVDALEARTSELEANQFSTTTKLQGQVVSVISDVLSGDRVNNADI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEE
VDTNTTLGVRARLELVSSFTGRDTLFTRIEANNITSPDINTPEGNLFFASVEPSTNAAIG
EECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEE
TLWYGFPVGKNTQAKLIAVGGAADDLTSTVNIFDGDGAFGALTTFGTRNPIYGQIGGTGL
EEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEECCCCCCC
GVTHQFSDKLALSLGYLSGTANDPSPQNGLFDGAYGALAQLTVRPSDRVSVGLTYINSYR
CCEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEHHHHHHHH
QPLATGSNAATTFQGLGERFSSNSYGLQASIGLSEKLVLGGWAGYTNSRILTGDRGDVDI
HHHCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCCCEEEECCCCCEEE
WNYAVTLGFPDLGKKGNLAGIIAGMEPKVTSSSIAGLNRDRDTSYHVEAFYQYKVSDNIT
EEEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEEEEEEECCCEE
ITPGIIWLTSPDHNDNNDDVVIGALRTTFSF
ECCCEEEEECCCCCCCCCCEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]