Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762381
Identifier: 170762381
GI number: 170762381
Start: 164532
End: 165716
Strand: Reverse
Name: 170762381
Synonym: UPA3_0131
Alternate gene names: NA
Gene position: 165716-164532 (Counterclockwise)
Preceding gene: 170762007
Following gene: 170761932
Centisome position: 22.05
GC content: 20.51
Gene sequence:
>1185_bases ATGAAAAAAAATAAATATAAACTTCTTATTAAATCACTAGTTATTACATCTTTTTTAGTTACTACTTCAAGTGTTATTGT AGCTTGTACTAATAAAGAAAAAGAGCAACATTTAACTGAATTAAAAAAATTATCTCAACATGCAAAACAAATATATAATG AAATTAAAACTAATGAATTATTTAAAAAGGAGGCTTCTGTTTTAAATGATCAAATTAATAAAGTTTTAAAAATTAATGAA CAAAATAATTTAGATGTCATTACTAAAAATTATAATGATTTAAAAAAATTATTAGATGAAATTCAAGAGAAAATTTCTAA AGAAAAAGAAAAAGAAAAGCAACAAAACGCTTATCTTAATAAAGAAATTAACATTAAATTAGAAAATTTAAATCAAATAG TTAATCATAATTTATTAAAAGGAAATAAAGAATCATTTTTTAATCAAATTATTAATTTCACTCCAATTACAACAGAAATT CAAACTATTATCAATCAAAATCAAAATCTTTTAGATTTCAAAAATGAAGAACTTGAATTAAAATTAAAAAATTTAGACCT TTTCATTAAAGAATTAGATCATAAATTTAAAAATATAATAGATCAACTATTTAATATTGAAGATTCATACATTAATAAGT TTCTAAAATTTATTAATAACCAGGACTTTATTAAGGATCAAAAATATCAAGAAAGAGAAAAGTTTAATCCGCAAGAATAT TTAGAATTAACAAAATCTATTCAAAGTAGTTTTAATAAATTAAAAAACGTTACTATCAATTCAAACCTAGACCAATACCT AAATTCACTTAATTTAGTGTTATTATCTTTAACTAATGAAACTAAAGCCTTTTTTACTAAATTTGAAGATCAAATTAAAA AATATTTTAAGTGAATTGTATATGGTAGAGATGATACACTAACAAAAGCCTTTAATCGAATTGTTGAAGAACAAAAAAGA AATGAATTTATAGAGCAAACAGAAAAAGCTTTATTAACTTTTCCCATGGAAATTAATCAAAAATTTAAAATGTTCGTTGA TTTTTTTACATTAAAAAATGATAAAAACGAAACTGAATATCAAAAAATCTGAAAGTCAAAACACAACGAAGTTAATAAAG TCTGATTTGGTATTGCAGAGTGTTTTGCAACTGGAAAATGTACAGACAAAAATAAACCATCATAA
Upstream 100 bases:
>100_bases ACAATTTCGCTAATCGTACATCTTTAATTCAACAAATCAAACAATTAGCCTATTTATATCCAGAAAAATATGAAGATATT TATAAATAGAAAGGAATCTT
Downstream 100 bases:
>100_bases AAAAATAACTAGGGTTTTATTTTAGTGCGATAATGCGCTAAGATAATTCCTGTTGCTACACCAACATTTAAAGATTGTAC ATCACCAAACATATCAATTC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKKNKYKLLIKSLVITSFLVTTSSVIVACTNKEKEQHLTELKKLSQHAKQIYNEIKTNELFKKEASVLNDQINKVLKINE QNNLDVITKNYNDLKKLLDEIQEKISKEKEKEKQQNAYLNKEINIKLENLNQIVNHNLLKGNKESFFNQIINFTPITTEI QTIINQNQNLLDFKNEELELKLKNLDLFIKELDHKFKNIIDQLFNIEDSYINKFLKFINNQDFIKDQKYQEREKFNPQEY LELTKSIQSSFNKLKNVTINSNLDQYLNSLNLVLLSLTNETKAFFTKFEDQIKKYFKWIVYGRDDTLTKAFNRIVEEQKR NEFIEQTEKALLTFPMEINQKFKMFVDFFTLKNDKNETEYQKIWKSKHNEVNKVWFGIAECFATGKCTDKNKPS
Sequences:
>Translated_394_residues MKKNKYKLLIKSLVITSFLVTTSSVIVACTNKEKEQHLTELKKLSQHAKQIYNEIKTNELFKKEASVLNDQINKVLKINE QNNLDVITKNYNDLKKLLDEIQEKISKEKEKEKQQNAYLNKEINIKLENLNQIVNHNLLKGNKESFFNQIINFTPITTEI QTIINQNQNLLDFKNEELELKLKNLDLFIKELDHKFKNIIDQLFNIEDSYINKFLKFINNQDFIKDQKYQEREKFNPQEY LELTKSIQSSFNKLKNVTINSNLDQYLNSLNLVLLSLTNETKAFFTKFEDQIKKYFK*IVYGRDDTLTKAFNRIVEEQKR NEFIEQTEKALLTFPMEINQKFKMFVDFFTLKNDKNETEYQKI*KSKHNEVNKV*FGIAECFATGKCTDKNKPS >Mature_394_residues MKKNKYKLLIKSLVITSFLVTTSSVIVACTNKEKEQHLTELKKLSQHAKQIYNEIKTNELFKKEASVLNDQINKVLKINE QNNLDVITKNYNDLKKLLDEIQEKISKEKEKEKQQNAYLNKEINIKLENLNQIVNHNLLKGNKESFFNQIINFTPITTEI QTIINQNQNLLDFKNEELELKLKNLDLFIKELDHKFKNIIDQLFNIEDSYINKFLKFINNQDFIKDQKYQEREKFNPQEY LELTKSIQSSFNKLKNVTINSNLDQYLNSLNLVLLSLTNETKAFFTKFEDQIKKYFK*IVYGRDDTLTKAFNRIVEEQKR NEFIEQTEKALLTFPMEINQKFKMFVDFFTLKNDKNETEYQKI*KSKHNEVNKV*FGIAECFATGKCTDKNKPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46329; Mature: 46329
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNKYKLLIKSLVITSFLVTTSSVIVACTNKEKEQHLTELKKLSQHAKQIYNEIKTNEL CCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKKEASVLNDQINKVLKINEQNNLDVITKNYNDLKKLLDEIQEKISKEKEKEKQQNAYLN HHHHHHHHHHHHHHHEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KEINIKLENLNQIVNHNLLKGNKESFFNQIINFTPITTEIQTIINQNQNLLDFKNEELEL CEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEE KLKNLDLFIKELDHKFKNIIDQLFNIEDSYINKFLKFINNQDFIKDQKYQEREKFNPQEY EHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH LELTKSIQSSFNKLKNVTINSNLDQYLNSLNLVLLSLTNETKAFFTKFEDQIKKYFKIVY HHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHC GRDDTLTKAFNRIVEEQKRNEFIEQTEKALLTFPMEINQKFKMFVDFFTLKNDKNETEYQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH KIKSKHNEVNKVFGIAECFATGKCTDKNKPS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKKNKYKLLIKSLVITSFLVTTSSVIVACTNKEKEQHLTELKKLSQHAKQIYNEIKTNEL CCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKKEASVLNDQINKVLKINEQNNLDVITKNYNDLKKLLDEIQEKISKEKEKEKQQNAYLN HHHHHHHHHHHHHHHEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KEINIKLENLNQIVNHNLLKGNKESFFNQIINFTPITTEIQTIINQNQNLLDFKNEELEL CEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEE KLKNLDLFIKELDHKFKNIIDQLFNIEDSYINKFLKFINNQDFIKDQKYQEREKFNPQEY EHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH LELTKSIQSSFNKLKNVTINSNLDQYLNSLNLVLLSLTNETKAFFTKFEDQIKKYFKIVY HHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHC GRDDTLTKAFNRIVEEQKRNEFIEQTEKALLTFPMEINQKFKMFVDFFTLKNDKNETEYQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH KIKSKHNEVNKVFGIAECFATGKCTDKNKPS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA