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The map label for this gene is hsdS [H]

Identifier: 170762363

GI number: 170762363

Start: 123346

End: 123867

Strand: Reverse

Name: hsdS [H]

Synonym: UPA3_0099

Alternate gene names: 170762363

Gene position: 123867-123346 (Counterclockwise)

Preceding gene: 170762135

Following gene: 170762011

Centisome position: 16.48

GC content: 23.18

Gene sequence:

>522_bases
TTGTCATTTAAGCATATATCTGCAAACGAATTAAAACGATATGAAAAGTGTAATTTTGGTAATGTTAAACTTCTTTCAAC
AGGATTGTATGATGGATATATAAAATATAATGAAAATGATAATAATATTAATTATGGCGAAATAATTGCTTTGCCATCTG
GTGGTTCTCCAATAATAAAATACTATAATGGTTATTTCATAGATAGTTTAAATATAATTTTTTCACAAAAAAACAAAAAA
GAATGTAATTTAAAATTTATTTACTATTTTTTGATAGCAAATAAAATGCTTATTGAAGAAAATTATCGTGGTGCATCTGT
AAAACATCCAAACATGATAGAGATTATTGAATTATTAATTCCTATCCCTCACATTTCAATCCAAAATAAAATTGTTGAAA
TCCTAGATAAATTAGAAGCATATACAAAAGATATTGGCGTAGGATTACCTTTTGAAATCAAACAACGCAAAAAACAATAT
GAATACTATCGAAATAAATTATTAGATTTTAAAAAATATTAA

Upstream 100 bases:

>100_bases
AAAATTAGTTCAAAACAATGTTAAATATAAAAAACTTTGAGAAATAGTTAATTTTGACAAAAAATTTAAAGGAGTTCCAA
AAGAAAAACAAAATGAAATA

Downstream 100 bases:

>100_bases
AAGGAGTTTGTTTTTATATTATGGAAAATAAGGTACTATTAGCAGAACATGAAAATTCAACGGTTGTTGCTGAATTTAAA
TCAATTAAAGTTCATTCGAA

Product: type I restriction modification DNA specificity family protein

Products: NA

Alternate protein names: S.EcoR124II; Type I restriction enzyme EcoR124II specificity protein; S protein [H]

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSFKHISANELKRYEKCNFGNVKLLSTGLYDGYIKYNENDNNINYGEIIALPSGGSPIIKYYNGYFIDSLNIIFSQKNKK
ECNLKFIYYFLIANKMLIEENYRGASVKHPNMIEIIELLIPIPHISIQNKIVEILDKLEAYTKDIGVGLPFEIKQRKKQY
EYYRNKLLDFKKY

Sequences:

>Translated_173_residues
MSFKHISANELKRYEKCNFGNVKLLSTGLYDGYIKYNENDNNINYGEIIALPSGGSPIIKYYNGYFIDSLNIIFSQKNKK
ECNLKFIYYFLIANKMLIEENYRGASVKHPNMIEIIELLIPIPHISIQNKIVEILDKLEAYTKDIGVGLPFEIKQRKKQY
EYYRNKLLDFKKY
>Mature_172_residues
SFKHISANELKRYEKCNFGNVKLLSTGLYDGYIKYNENDNNINYGEIIALPSGGSPIIKYYNGYFIDSLNIIFSQKNKKE
CNLKFIYYFLIANKMLIEENYRGASVKHPNMIEIIELLIPIPHISIQNKIVEILDKLEAYTKDIGVGLPFEIKQRKKQYE
YYRNKLLDFKKY

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 20373; Mature: 20242

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFKHISANELKRYEKCNFGNVKLLSTGLYDGYIKYNENDNNINYGEIIALPSGGSPIIK
CCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCEEE
YYNGYFIDSLNIIFSQKNKKECNLKFIYYFLIANKMLIEENYRGASVKHPNMIEIIELLI
ECCCEEEEEEEEEEECCCCCCCCCEEEEEEHHHHHHEEECCCCCCCCCCCCHHHHHHHHH
PIPHISIQNKIVEILDKLEAYTKDIGVGLPFEIKQRKKQYEYYRNKLLDFKKY
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFKHISANELKRYEKCNFGNVKLLSTGLYDGYIKYNENDNNINYGEIIALPSGGSPIIK
CCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCEEE
YYNGYFIDSLNIIFSQKNKKECNLKFIYYFLIANKMLIEENYRGASVKHPNMIEIIELLI
ECCCEEEEEEEEEEECCCCCCCCCEEEEEEHHHHHHEEECCCCCCCCCCCCHHHHHHHHH
PIPHISIQNKIVEILDKLEAYTKDIGVGLPFEIKQRKKQYEYYRNKLLDFKKY
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2784505 [H]