Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762309
Identifier: 170762309
GI number: 170762309
Start: 35518
End: 36045
Strand: Reverse
Name: 170762309
Synonym: UPA3_0032
Alternate gene names: NA
Gene position: 36045-35518 (Counterclockwise)
Preceding gene: 170762084
Following gene: 170762282
Centisome position: 4.8
GC content: 21.97
Gene sequence:
>528_bases ATGTCTAAGAAAATAAATAACAATAAAACTCCTCGCAATAAAGTTAAAAATAACAATGTTTCAAAAGATAATGATGACAT TGTTATTTCTTTGCGTTATGAAAATTGAGTTAAAGAGGAACGAGTAAATAGTTTAACGACTTATACTAAGGATGAAAACC AATTTTTAAAAAATATTATTTATATTCTTAATACATTGTTTCCCTATGTTTATAAAAATTGAAAAAATAAAGGAATTAAC GATCATTGCCATCCTATTAAACAAAATAATGTATTTAGTAAATATATTAAATTAATTAAAAAACTCCATCCTAATTTATT GAAAAATGATAATGAAGAATTAGAACTTTATCAACTAGGCCTTGGAAGATCAGTTAGAGTAATATGCTCAAAAATCGATA ATATTTTATTTCCTTTACTTATTGATCATCATCATTTAGGATATGAAAGTCAATCTTATAATGATAAAGATACTAAAAAA TATGATTATTGTCCTTTAAGAAAATATAATAAAAATCAAGATAACTAA
Upstream 100 bases:
>100_bases CGCAAAGGGTTTGGACCGCTAGATAGTTGTAATGCAGTAATAAGCGATAAAGAAATATTTAGTTATTATATAAAACAAAT GAAGAATAATTAAATTATTA
Downstream 100 bases:
>100_bases TTATTAATCTACTTTGTTTTGTAAAGTAGATTTTTAAATATTATCACTACTTTTAACTTAACTTAAAAAGATACTTAGAC TCAAAATGATTTTAATAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSKKINNNKTPRNKVKNNNVSKDNDDIVISLRYENWVKEERVNSLTTYTKDENQFLKNIIYILNTLFPYVYKNWKNKGIN DHCHPIKQNNVFSKYIKLIKKLHPNLLKNDNEELELYQLGLGRSVRVICSKIDNILFPLLIDHHHLGYESQSYNDKDTKK YDYCPLRKYNKNQDN
Sequences:
>Translated_175_residues MSKKINNNKTPRNKVKNNNVSKDNDDIVISLRYEN*VKEERVNSLTTYTKDENQFLKNIIYILNTLFPYVYKN*KNKGIN DHCHPIKQNNVFSKYIKLIKKLHPNLLKNDNEELELYQLGLGRSVRVICSKIDNILFPLLIDHHHLGYESQSYNDKDTKK YDYCPLRKYNKNQDN >Mature_174_residues SKKINNNKTPRNKVKNNNVSKDNDDIVISLRYEN*VKEERVNSLTTYTKDENQFLKNIIYILNTLFPYVYKN*KNKGIND HCHPIKQNNVFSKYIKLIKKLHPNLLKNDNEELELYQLGLGRSVRVICSKIDNILFPLLIDHHHLGYESQSYNDKDTKKY DYCPLRKYNKNQDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20542; Mature: 20410
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKINNNKTPRNKVKNNNVSKDNDDIVISLRYENVKEERVNSLTTYTKDENQFLKNIIY CCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH ILNTLFPYVYKNKNKGINDHCHPIKQNNVFSKYIKLIKKLHPNLLKNDNEELELYQLGLG HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCC RSVRVICSKIDNILFPLLIDHHHLGYESQSYNDKDTKKYDYCPLRKYNKNQDN CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKKINNNKTPRNKVKNNNVSKDNDDIVISLRYENVKEERVNSLTTYTKDENQFLKNIIY CCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH ILNTLFPYVYKNKNKGINDHCHPIKQNNVFSKYIKLIKKLHPNLLKNDNEELELYQLGLG HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHCCCCCCEEEEECCCC RSVRVICSKIDNILFPLLIDHHHLGYESQSYNDKDTKKYDYCPLRKYNKNQDN CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]