Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762302
Identifier: 170762302
GI number: 170762302
Start: 126942
End: 127508
Strand: Reverse
Name: 170762302
Synonym: UPA3_0104
Alternate gene names: NA
Gene position: 127508-126942 (Counterclockwise)
Preceding gene: 170762026
Following gene: 170762135
Centisome position: 16.96
GC content: 32.8
Gene sequence:
>567_bases ATGGCTAAATACATTAAAACAGGTGTTTCTTACATTAATTTAGACAACGCACGTACAATTAATATTCTTCCAGAAGATAT TGATTCATATTTAGAACTTGGTGGAGATGAAGCTTATAAAACAAGCGATCTAGGATCAGAGTTGTATATTAATTATGCTG ATTTTGAATCAACAAACATTTTATTTGATCTTAAAAAAGAAGAGTTACAAGCAAAAATTGATGCTTTTTTAATTTCTAAT GATACAGTATTAGATTTATCAGAAGTTTTCTTAGATATTCATTTTAGTGAAGATGATGATTATGAAGAAGATTGCTGTTG TGAAGATGAATGCTGTAGCGATGAAGAAAATGAAGCTTGTTGTAATTCAGAAGTAAAAGTTGAAGAAGAATGCTGTGGCG GAGCTAAAGATGATTGTTGTGGTGGTCACGAACATGAACATGAAGTTTGCTGTGACTCGGAAACAAAAACATCAGAAACC CAAGAAGAATGTTGTGGTGGAACTAAAGATGATTGCTGTGGTGGTCACGAACATGAACACCATCATCATCACAGTCACCA ACATTAA
Upstream 100 bases:
>100_bases TAAAAATAATCTTCTTTGAATCATAAATATAAGAATGAAATATTTGGTATAAAATAATAAGGTGAAACCTAATAATATTT AATAATTAAGGAGTATATTT
Downstream 100 bases:
>100_bases TTAAAAAGTATTTAATTAAATGATAGAGATTACTAAGTTAATTAGGAATCTCTTTTTTATTTATATATGGTTTTAAAATT AATAAATCCATATTTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MAKYIKTGVSYINLDNARTINILPEDIDSYLELGGDEAYKTSDLGSELYINYADFESTNILFDLKKEELQAKIDAFLISN DTVLDLSEVFLDIHFSEDDDYEEDCCCEDECCSDEENEACCNSEVKVEEECCGGAKDDCCGGHEHEHEVCCDSETKTSET QEECCGGTKDDCCGGHEHEHHHHHSHQH
Sequences:
>Translated_188_residues MAKYIKTGVSYINLDNARTINILPEDIDSYLELGGDEAYKTSDLGSELYINYADFESTNILFDLKKEELQAKIDAFLISN DTVLDLSEVFLDIHFSEDDDYEEDCCCEDECCSDEENEACCNSEVKVEEECCGGAKDDCCGGHEHEHEVCCDSETKTSET QEECCGGTKDDCCGGHEHEHHHHHSHQH >Mature_187_residues AKYIKTGVSYINLDNARTINILPEDIDSYLELGGDEAYKTSDLGSELYINYADFESTNILFDLKKEELQAKIDAFLISND TVLDLSEVFLDIHFSEDDDYEEDCCCEDECCSDEENEACCNSEVKVEEECCGGAKDDCCGGHEHEHEVCCDSETKTSETQ EECCGGTKDDCCGGHEHEHHHHHSHQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y101_UREPA (Q9PR43)
Other databases:
- EMBL: AF222894 - RefSeq: NP_077932.1 - GeneID: 876168 - GenomeReviews: AF222894_GR - KEGG: uur:UU101 - HOGENOM: HBG263858 - OMA: NARTINV - ProtClustDB: CLSK2298772 - BioCyc: UURE95667:UU101-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21165; Mature: 21034
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 9.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKYIKTGVSYINLDNARTINILPEDIDSYLELGGDEAYKTSDLGSELYINYADFESTNI CCCHHHHCCEEEECCCCEEEEECHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCEE LFDLKKEELQAKIDAFLISNDTVLDLSEVFLDIHFSEDDDYEEDCCCEDECCSDEENEAC EEEECHHHHHHHHHEEEECCCCEEEHHHHEEEEECCCCCCCCCCCCCCHHHCCCCCCHHH CNSEVKVEEECCGGAKDDCCGGHEHEHEVCCDSETKTSETQEECCGGTKDDCCGGHEHEH CCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC HHHHSHQH CCCCCCCC >Mature Secondary Structure AKYIKTGVSYINLDNARTINILPEDIDSYLELGGDEAYKTSDLGSELYINYADFESTNI CCHHHHCCEEEECCCCEEEEECHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCEE LFDLKKEELQAKIDAFLISNDTVLDLSEVFLDIHFSEDDDYEEDCCCEDECCSDEENEAC EEEECHHHHHHHHHEEEECCCCEEEHHHHEEEEECCCCCCCCCCCCCCHHHCCCCCCHHH CNSEVKVEEECCGGAKDDCCGGHEHEHEVCCDSETKTSETQEECCGGTKDDCCGGHEHEH CCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC HHHHSHQH CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724