Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762164
Identifier: 170762164
GI number: 170762164
Start: 210417
End: 211916
Strand: Direct
Name: 170762164
Synonym: UPA3_0179
Alternate gene names: NA
Gene position: 210417-211916 (Clockwise)
Preceding gene: 170762238
Following gene: 170761908
Centisome position: 27.99
GC content: 23.87
Gene sequence:
>1500_bases ATGAAATTATTAAAAAACAAAAAATTTTGAGCAATGTCATTAAGTGCGATTGCAATTAGTACAAGTATAGTTGCGTTCGC AGCTTCTTGTTCAAATACAAATATTAAATCTAAGTTAAGCAAGCAATTAGCACAAACAAAAGATCAAAAAAACCATTTTG CTGTTTATGAAATTGAAAATTATACTAAACTAACAGATGAAGAAAAGAAGTCATTAGAAAATCTTGAGTTTGGTGTTTCT ATTTTGGATAAAGATGGTAAAAATCCAATAAATATTAAAGTTAAAGGAGTTCAAAAAGAAGGTAAGATTTACGTTAAATT GCCACGCAAACCAGAAGTAAATGAAAAATTACTTGTTGTACCAACTAAAAATATTTTAAAAACAGAAGCATTAGTTTTAA ATAATGATAATTTAAATTATCAAACAGTAACTTTTGAACAAGTTCCTGATCAAAAATTAGAACCAAAAGAAGAAAAACAA ACTAAAGCTGTTGATTATGAAAAAGCAATTAAAGATGAAGATTATGTAAAACAAATTACATTATCTAATTTAGAAAAATA TATTAGTAATGAGTATCAATATTTAAATCCAAATAATAAAACACTAGATTATAAAAATCATAGTTTTGTTCAAAAGTTTT TAGACGAAATTGATCTTTTAGCACAAAAATTAGAAAGCAACGACCTTAATTTAGAAGATAAACAAATTTATGAAAAAATT ATTTTAGGATTACGTTGATTGCTAGCAGAAGATAATAATGAAACTAAAAATAAAGCTTTAGAATTATTTAAAGATTACTT TACAACAATCATGAAAGCAACAAAAGTAAATGATAAAGTTCATTATGATCCAAGTTTTATTAATGAATTTTATGGTTCAA TAAGCAATTTGTTTGAAGAGCATGATTTAGAGCCATCAGTGGAAATTGAATCTAATAAAATCCGTATTGTTAAAGAAGAT AAAGATGTAATAAAAGACAAAACAGTTACTGCAACATTTAATTTATACAATGGCTTTGACTGATCAACATTATTAAAAGA TGTTGTATTTAAAGAATATAAGAAAGATAGTAATGGTAAACCAGTAATAGATGAAAAAACAAAAATGCCAATTGAAACTG ATAAAATAGTTGAAGATCCTGTAGTAATGCGTTTAGAAATTGCTGAATATCCAAAAGATTGAAACACTAGCAAAGAAAAT CCTAAAAACTTTTCATATATTAACTTTAAAAAATCAGAAGTTTTAAAATCACCAAAATTAGTGTTTACTAAGGTATTTAA TTTAGATAAAGAACAAAAATATCATATTAACAATGTAATGTTCAGCCATAAATTAATTCCCAATTTATTGAAAGCATTGG ATATAAAAAACAATACAACTAATGCCGAATTAATTAAAAAAATTAAAGAAAATATGACTGCTATTGATGAAAAAACACAA ACAAATTTAAATACAAATTACATTCCTTTGTCACTTACAGAAACAAATAATAAAAAATAA
Upstream 100 bases:
>100_bases ATAAAATTGTTTTATGTACAATATACAATGTTCTTTTTAAATTTTTACAATTAGAATAATTTAAATAACAAAAATTAATC TATTAGGAGATTATATATAA
Downstream 100 bases:
>100_bases TTAATATAAAAAACTCTAGTTAGTATCTTTAAAATAACACTAGAGTTTTTTATATTAACTTAAAATTAAATTTTTCATTT TAGCTTCATCAATAAGTTTT
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein; 5-Nucleotidase; 5-Nucleotidase Lipoprotein E
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MKLLKNKKFWAMSLSAIAISTSIVAFAASCSNTNIKSKLSKQLAQTKDQKNHFAVYEIENYTKLTDEEKKSLENLEFGVS ILDKDGKNPINIKVKGVQKEGKIYVKLPRKPEVNEKLLVVPTKNILKTEALVLNNDNLNYQTVTFEQVPDQKLEPKEEKQ TKAVDYEKAIKDEDYVKQITLSNLEKYISNEYQYLNPNNKTLDYKNHSFVQKFLDEIDLLAQKLESNDLNLEDKQIYEKI ILGLRWLLAEDNNETKNKALELFKDYFTTIMKATKVNDKVHYDPSFINEFYGSISNLFEEHDLEPSVEIESNKIRIVKED KDVIKDKTVTATFNLYNGFDWSTLLKDVVFKEYKKDSNGKPVIDEKTKMPIETDKIVEDPVVMRLEIAEYPKDWNTSKEN PKNFSYINFKKSEVLKSPKLVFTKVFNLDKEQKYHINNVMFSHKLIPNLLKALDIKNNTTNAELIKKIKENMTAIDEKTQ TNLNTNYIPLSLTETNNKK
Sequences:
>Translated_499_residues MKLLKNKKF*AMSLSAIAISTSIVAFAASCSNTNIKSKLSKQLAQTKDQKNHFAVYEIENYTKLTDEEKKSLENLEFGVS ILDKDGKNPINIKVKGVQKEGKIYVKLPRKPEVNEKLLVVPTKNILKTEALVLNNDNLNYQTVTFEQVPDQKLEPKEEKQ TKAVDYEKAIKDEDYVKQITLSNLEKYISNEYQYLNPNNKTLDYKNHSFVQKFLDEIDLLAQKLESNDLNLEDKQIYEKI ILGLR*LLAEDNNETKNKALELFKDYFTTIMKATKVNDKVHYDPSFINEFYGSISNLFEEHDLEPSVEIESNKIRIVKED KDVIKDKTVTATFNLYNGFD*STLLKDVVFKEYKKDSNGKPVIDEKTKMPIETDKIVEDPVVMRLEIAEYPKD*NTSKEN PKNFSYINFKKSEVLKSPKLVFTKVFNLDKEQKYHINNVMFSHKLIPNLLKALDIKNNTTNAELIKKIKENMTAIDEKTQ TNLNTNYIPLSLTETNNKK >Mature_499_residues MKLLKNKKF*AMSLSAIAISTSIVAFAASCSNTNIKSKLSKQLAQTKDQKNHFAVYEIENYTKLTDEEKKSLENLEFGVS ILDKDGKNPINIKVKGVQKEGKIYVKLPRKPEVNEKLLVVPTKNILKTEALVLNNDNLNYQTVTFEQVPDQKLEPKEEKQ TKAVDYEKAIKDEDYVKQITLSNLEKYISNEYQYLNPNNKTLDYKNHSFVQKFLDEIDLLAQKLESNDLNLEDKQIYEKI ILGLR*LLAEDNNETKNKALELFKDYFTTIMKATKVNDKVHYDPSFINEFYGSISNLFEEHDLEPSVEIESNKIRIVKED KDVIKDKTVTATFNLYNGFD*STLLKDVVFKEYKKDSNGKPVIDEKTKMPIETDKIVEDPVVMRLEIAEYPKD*NTSKEN PKNFSYINFKKSEVLKSPKLVFTKVFNLDKEQKYHINNVMFSHKLIPNLLKALDIKNNTTNAELIKKIKENMTAIDEKTQ TNLNTNYIPLSLTETNNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57162; Mature: 57162
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKNKKFAMSLSAIAISTSIVAFAASCSNTNIKSKLSKQLAQTKDQKNHFAVYEIENY CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCC TKLTDEEKKSLENLEFGVSILDKDGKNPINIKVKGVQKEGKIYVKLPRKPEVNEKLLVVP HHCCCHHHHHHHHHHHCEEEECCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCEEEEE TKNILKTEALVLNNDNLNYQTVTFEQVPDQKLEPKEEKQTKAVDYEKAIKDEDYVKQITL CCHHHHCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHH SNLEKYISNEYQYLNPNNKTLDYKNHSFVQKFLDEIDLLAQKLESNDLNLEDKQIYEKII HHHHHHHCCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LGLRLLAEDNNETKNKALELFKDYFTTIMKATKVNDKVHYDPSFINEFYGSISNLFEEHD HHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHC LEPSVEIESNKIRIVKEDKDVIKDKTVTATFNLYNGFDSTLLKDVVFKEYKKDSNGKPVI CCCCEEEECCEEEEEECCHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC DEKTKMPIETDKIVEDPVVMRLEIAEYPKDNTSKENPKNFSYINFKKSEVLKSPKLVFTK CCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECHHHHHCCCHHHHHH VFNLDKEQKYHINNVMFSHKLIPNLLKALDIKNNTTNAELIKKIKENMTAIDEKTQTNLN HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC TNYIPLSLTETNNKK CCEEEEEEECCCCCC >Mature Secondary Structure MKLLKNKKFAMSLSAIAISTSIVAFAASCSNTNIKSKLSKQLAQTKDQKNHFAVYEIENY CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCC TKLTDEEKKSLENLEFGVSILDKDGKNPINIKVKGVQKEGKIYVKLPRKPEVNEKLLVVP HHCCCHHHHHHHHHHHCEEEECCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCEEEEE TKNILKTEALVLNNDNLNYQTVTFEQVPDQKLEPKEEKQTKAVDYEKAIKDEDYVKQITL CCHHHHCEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHH SNLEKYISNEYQYLNPNNKTLDYKNHSFVQKFLDEIDLLAQKLESNDLNLEDKQIYEKII HHHHHHHCCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LGLRLLAEDNNETKNKALELFKDYFTTIMKATKVNDKVHYDPSFINEFYGSISNLFEEHD HHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHC LEPSVEIESNKIRIVKEDKDVIKDKTVTATFNLYNGFDSTLLKDVVFKEYKKDSNGKPVI CCCCEEEECCEEEEEECCHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCC DEKTKMPIETDKIVEDPVVMRLEIAEYPKDNTSKENPKNFSYINFKKSEVLKSPKLVFTK CCCCCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECHHHHHCCCHHHHHH VFNLDKEQKYHINNVMFSHKLIPNLLKALDIKNNTTNAELIKKIKENMTAIDEKTQTNLN HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC TNYIPLSLTETNNKK CCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA