Definition Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome.
Accession NC_010503
Length 751,679

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The map label for this gene is 170762119

Identifier: 170762119

GI number: 170762119

Start: 59817

End: 60731

Strand: Direct

Name: 170762119

Synonym: UPA3_0049

Alternate gene names: NA

Gene position: 59817-60731 (Clockwise)

Preceding gene: 170762253

Following gene: 170762158

Centisome position: 7.96

GC content: 20.55

Gene sequence:

>915_bases
ATGCAATTAAAAGATTTAATTAATAAAAAAAAGAATTTAAATAATATTAATTTAAAAGTGAGTAACGAACGTAATATTTT
TTTAATTAATATTATGAAACTAAATCAGCGATTAACTTTTTTTAGTAAAAATGCTTTTGAAATAAAAGAATCAATTCTAA
GTTTAAAGCGTATTTATAATATTAAACATGATATGTTAAGACATGAGGAACGAAAGATTTTTAAGTTTTTAAATAAAATT
AATGATCGTGTTTTATGGATTTATTTAACTGAAGAGCAAAAATATAGTACTGATTCATATTCGCGTTATGAACAAAAAAT
CTTAAAAACGATTAAATCAAATCGTGATGATTTTATTTTGATCGGTCAAGGAGCAATTGAATTTGGTAAGAATCATAATT
TAAATGTTCTGCAAACATTTAATGACTCAAATATTAAAAATTTAACTACACAATTAACTAAAATGATTATGATTTTATAT
ACTTTTGATAATTATAAAAAAGTTAATTTTGTTATTAATTCTAATAAAAACTATGATGGACACTTTACTATATTACCAAT
GAATGAATTTAGTTTTGATAAATTTATTAATTTACAAAAATGCGATTCTAATATTATTGATTTTCAAAAAGTAAAAATTT
ATCCAAATTTAAATGAATTTATTAATGTCCAAATTAATGTTTTCTTAGTTAATATTATTAATACTTTAATTACTGAATCA
TCTTTTTATAAAACAAAAAATGGACTAGTAGCTACTAATAATATCCTAAAAGAACTAGATGATAACCTTTCAAAAATTCA
ACGTAAAATTACACGTGTAAAGACAGAGTTGCAAATTGAAGAAATAAATTTATTAGCAAGACAAAATATGAATGAAGATG
ATAATGATAACGATGGTGGTGTTTATGAATCATAA

Upstream 100 bases:

>100_bases
CTCATTTGATTTTATTTAAATCAAATCTTAATGGTAGTTTAGTGCTCGTATTTAGTGAAAAAATTATCGCTTCAATTGAA
CAAAAATCAGGAAATTAAGT

Downstream 100 bases:

>100_bases
TTATAATATTCAAATTACATTACTTGAAAACAAAAAGTTTAATATTGATAATGGTTTATTATATGTAAATGTTAATGAAG
AAAATACATGACAAAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MQLKDLINKKKNLNNINLKVSNERNIFLINIMKLNQRLTFFSKNAFEIKESILSLKRIYNIKHDMLRHEERKIFKFLNKI
NDRVLWIYLTEEQKYSTDSYSRYEQKILKTIKSNRDDFILIGQGAIEFGKNHNLNVLQTFNDSNIKNLTTQLTKMIMILY
TFDNYKKVNFVINSNKNYDGHFTILPMNEFSFDKFINLQKCDSNIIDFQKVKIYPNLNEFINVQINVFLVNIINTLITES
SFYKTKNGLVATNNILKELDDNLSKIQRKITRVKTELQIEEINLLARQNMNEDDNDNDGGVYES

Sequences:

>Translated_304_residues
MQLKDLINKKKNLNNINLKVSNERNIFLINIMKLNQRLTFFSKNAFEIKESILSLKRIYNIKHDMLRHEERKIFKFLNKI
NDRVLWIYLTEEQKYSTDSYSRYEQKILKTIKSNRDDFILIGQGAIEFGKNHNLNVLQTFNDSNIKNLTTQLTKMIMILY
TFDNYKKVNFVINSNKNYDGHFTILPMNEFSFDKFINLQKCDSNIIDFQKVKIYPNLNEFINVQINVFLVNIINTLITES
SFYKTKNGLVATNNILKELDDNLSKIQRKITRVKTELQIEEINLLARQNMNEDDNDNDGGVYES
>Mature_304_residues
MQLKDLINKKKNLNNINLKVSNERNIFLINIMKLNQRLTFFSKNAFEIKESILSLKRIYNIKHDMLRHEERKIFKFLNKI
NDRVLWIYLTEEQKYSTDSYSRYEQKILKTIKSNRDDFILIGQGAIEFGKNHNLNVLQTFNDSNIKNLTTQLTKMIMILY
TFDNYKKVNFVINSNKNYDGHFTILPMNEFSFDKFINLQKCDSNIIDFQKVKIYPNLNEFINVQINVFLVNIINTLITES
SFYKTKNGLVATNNILKELDDNLSKIQRKITRVKTELQIEEINLLARQNMNEDDNDNDGGVYES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y050_UREPA (Q9PR95)

Other databases:

- EMBL:   AF222894
- RefSeq:   NP_077880.1
- GeneID:   875867
- GenomeReviews:   AF222894_GR
- KEGG:   uur:UU050
- HOGENOM:   HBG565949
- OMA:   ESQFIVY
- ProtClustDB:   CLSK782811
- BioCyc:   UURE95667:UU050-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36055; Mature: 36055

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKDLINKKKNLNNINLKVSNERNIFLINIMKLNQRLTFFSKNAFEIKESILSLKRIYN
CCCHHHHHHHCCCCEEEEEECCCCCEEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHH
IKHDMLRHEERKIFKFLNKINDRVLWIYLTEEQKYSTDSYSRYEQKILKTIKSNRDDFIL
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEE
IGQGAIEFGKNHNLNVLQTFNDSNIKNLTTQLTKMIMILYTFDNYKKVNFVINSNKNYDG
EECCHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCC
HFTILPMNEFSFDKFINLQKCDSNIIDFQKVKIYPNLNEFINVQINVFLVNIINTLITES
EEEEEECCCCCHHHHCCHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEHHHHHHHHHCCC
SFYKTKNGLVATNNILKELDDNLSKIQRKITRVKTELQIEEINLLARQNMNEDDNDNDGG
HHEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VYES
CCCC
>Mature Secondary Structure
MQLKDLINKKKNLNNINLKVSNERNIFLINIMKLNQRLTFFSKNAFEIKESILSLKRIYN
CCCHHHHHHHCCCCEEEEEECCCCCEEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHH
IKHDMLRHEERKIFKFLNKINDRVLWIYLTEEQKYSTDSYSRYEQKILKTIKSNRDDFIL
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEE
IGQGAIEFGKNHNLNVLQTFNDSNIKNLTTQLTKMIMILYTFDNYKKVNFVINSNKNYDG
EECCHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCC
HFTILPMNEFSFDKFINLQKCDSNIIDFQKVKIYPNLNEFINVQINVFLVNIINTLITES
EEEEEECCCCCHHHHCCHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEHHHHHHHHHCCC
SFYKTKNGLVATNNILKELDDNLSKIQRKITRVKTELQIEEINLLARQNMNEDDNDNDGG
HHEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VYES
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724