Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170762119
Identifier: 170762119
GI number: 170762119
Start: 59817
End: 60731
Strand: Direct
Name: 170762119
Synonym: UPA3_0049
Alternate gene names: NA
Gene position: 59817-60731 (Clockwise)
Preceding gene: 170762253
Following gene: 170762158
Centisome position: 7.96
GC content: 20.55
Gene sequence:
>915_bases ATGCAATTAAAAGATTTAATTAATAAAAAAAAGAATTTAAATAATATTAATTTAAAAGTGAGTAACGAACGTAATATTTT TTTAATTAATATTATGAAACTAAATCAGCGATTAACTTTTTTTAGTAAAAATGCTTTTGAAATAAAAGAATCAATTCTAA GTTTAAAGCGTATTTATAATATTAAACATGATATGTTAAGACATGAGGAACGAAAGATTTTTAAGTTTTTAAATAAAATT AATGATCGTGTTTTATGGATTTATTTAACTGAAGAGCAAAAATATAGTACTGATTCATATTCGCGTTATGAACAAAAAAT CTTAAAAACGATTAAATCAAATCGTGATGATTTTATTTTGATCGGTCAAGGAGCAATTGAATTTGGTAAGAATCATAATT TAAATGTTCTGCAAACATTTAATGACTCAAATATTAAAAATTTAACTACACAATTAACTAAAATGATTATGATTTTATAT ACTTTTGATAATTATAAAAAAGTTAATTTTGTTATTAATTCTAATAAAAACTATGATGGACACTTTACTATATTACCAAT GAATGAATTTAGTTTTGATAAATTTATTAATTTACAAAAATGCGATTCTAATATTATTGATTTTCAAAAAGTAAAAATTT ATCCAAATTTAAATGAATTTATTAATGTCCAAATTAATGTTTTCTTAGTTAATATTATTAATACTTTAATTACTGAATCA TCTTTTTATAAAACAAAAAATGGACTAGTAGCTACTAATAATATCCTAAAAGAACTAGATGATAACCTTTCAAAAATTCA ACGTAAAATTACACGTGTAAAGACAGAGTTGCAAATTGAAGAAATAAATTTATTAGCAAGACAAAATATGAATGAAGATG ATAATGATAACGATGGTGGTGTTTATGAATCATAA
Upstream 100 bases:
>100_bases CTCATTTGATTTTATTTAAATCAAATCTTAATGGTAGTTTAGTGCTCGTATTTAGTGAAAAAATTATCGCTTCAATTGAA CAAAAATCAGGAAATTAAGT
Downstream 100 bases:
>100_bases TTATAATATTCAAATTACATTACTTGAAAACAAAAAGTTTAATATTGATAATGGTTTATTATATGTAAATGTTAATGAAG AAAATACATGACAAAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MQLKDLINKKKNLNNINLKVSNERNIFLINIMKLNQRLTFFSKNAFEIKESILSLKRIYNIKHDMLRHEERKIFKFLNKI NDRVLWIYLTEEQKYSTDSYSRYEQKILKTIKSNRDDFILIGQGAIEFGKNHNLNVLQTFNDSNIKNLTTQLTKMIMILY TFDNYKKVNFVINSNKNYDGHFTILPMNEFSFDKFINLQKCDSNIIDFQKVKIYPNLNEFINVQINVFLVNIINTLITES SFYKTKNGLVATNNILKELDDNLSKIQRKITRVKTELQIEEINLLARQNMNEDDNDNDGGVYES
Sequences:
>Translated_304_residues MQLKDLINKKKNLNNINLKVSNERNIFLINIMKLNQRLTFFSKNAFEIKESILSLKRIYNIKHDMLRHEERKIFKFLNKI NDRVLWIYLTEEQKYSTDSYSRYEQKILKTIKSNRDDFILIGQGAIEFGKNHNLNVLQTFNDSNIKNLTTQLTKMIMILY TFDNYKKVNFVINSNKNYDGHFTILPMNEFSFDKFINLQKCDSNIIDFQKVKIYPNLNEFINVQINVFLVNIINTLITES SFYKTKNGLVATNNILKELDDNLSKIQRKITRVKTELQIEEINLLARQNMNEDDNDNDGGVYES >Mature_304_residues MQLKDLINKKKNLNNINLKVSNERNIFLINIMKLNQRLTFFSKNAFEIKESILSLKRIYNIKHDMLRHEERKIFKFLNKI NDRVLWIYLTEEQKYSTDSYSRYEQKILKTIKSNRDDFILIGQGAIEFGKNHNLNVLQTFNDSNIKNLTTQLTKMIMILY TFDNYKKVNFVINSNKNYDGHFTILPMNEFSFDKFINLQKCDSNIIDFQKVKIYPNLNEFINVQINVFLVNIINTLITES SFYKTKNGLVATNNILKELDDNLSKIQRKITRVKTELQIEEINLLARQNMNEDDNDNDGGVYES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y050_UREPA (Q9PR95)
Other databases:
- EMBL: AF222894 - RefSeq: NP_077880.1 - GeneID: 875867 - GenomeReviews: AF222894_GR - KEGG: uur:UU050 - HOGENOM: HBG565949 - OMA: ESQFIVY - ProtClustDB: CLSK782811 - BioCyc: UURE95667:UU050-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36055; Mature: 36055
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLKDLINKKKNLNNINLKVSNERNIFLINIMKLNQRLTFFSKNAFEIKESILSLKRIYN CCCHHHHHHHCCCCEEEEEECCCCCEEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHH IKHDMLRHEERKIFKFLNKINDRVLWIYLTEEQKYSTDSYSRYEQKILKTIKSNRDDFIL HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEE IGQGAIEFGKNHNLNVLQTFNDSNIKNLTTQLTKMIMILYTFDNYKKVNFVINSNKNYDG EECCHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCC HFTILPMNEFSFDKFINLQKCDSNIIDFQKVKIYPNLNEFINVQINVFLVNIINTLITES EEEEEECCCCCHHHHCCHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEHHHHHHHHHCCC SFYKTKNGLVATNNILKELDDNLSKIQRKITRVKTELQIEEINLLARQNMNEDDNDNDGG HHEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VYES CCCC >Mature Secondary Structure MQLKDLINKKKNLNNINLKVSNERNIFLINIMKLNQRLTFFSKNAFEIKESILSLKRIYN CCCHHHHHHHCCCCEEEEEECCCCCEEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHH IKHDMLRHEERKIFKFLNKINDRVLWIYLTEEQKYSTDSYSRYEQKILKTIKSNRDDFIL HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEE IGQGAIEFGKNHNLNVLQTFNDSNIKNLTTQLTKMIMILYTFDNYKKVNFVINSNKNYDG EECCHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCC HFTILPMNEFSFDKFINLQKCDSNIIDFQKVKIYPNLNEFINVQINVFLVNIINTLITES EEEEEECCCCCHHHHCCHHHCCCCCCCEEEEEECCCCCCEEEEEEEEEHHHHHHHHHCCC SFYKTKNGLVATNNILKELDDNLSKIQRKITRVKTELQIEEINLLARQNMNEDDNDNDGG HHEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC VYES CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724