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The map label for this gene is 170762108

Identifier: 170762108

GI number: 170762108

Start: 143015

End: 144142

Strand: Direct

Name: 170762108

Synonym: UPA3_0115

Alternate gene names: NA

Gene position: 143015-144142 (Clockwise)

Preceding gene: 170761868

Following gene: 170762339

Centisome position: 19.03

GC content: 20.74

Gene sequence:

>1128_bases
ATGAAAATATGTGATAATATTAGTGAAATAAATGATGATCAGGATTTAGTCTTTATTGATATTGAAGCAACAGATAGTAA
GGGCGAACAACGAATTATTCAGTTTAGCGGATACCGTTTAAATATTAAAAAAAATAAAATTTTTAATTTTAATAAAAAAT
TCAATCCTGAACAAGAAATTAATTCACGTATTAAAACCTTGCTGAACTTTAATAAAAATTTTAATAATATTGAACAAATG
CCAAAATTAGATAAGCAAGCAGCAAGAGAAATTTATTGTTTTGTTAAAAATGCGATTGTCATTACTTTCACAGATTTTGA
TATTAAAAAAATGCACGAGCTTTTTACATATTATAATTTCGATTTTGAAAAAATCGTTTATTTTGATGTTTATAAGTTTT
TTGAAAAAAAATTACAAACTAAATCAGTTCCTAGTTTATTTTCATTAGGAATTCTAAGTGGAATTAAAATTAATTTTTTC
AAATTACATAATGCGCTATATGATGCTTTTATTTTAAAAGAAATTTTTATGTGTATTCGTCATAAAACGAACGAAGAATT
ATATGAAATGTATCGTTATTATGAATTTTTGCCAAAAATTATTTCTTCTTCATATTTTGTTACTAATGAACAAGAAAAAA
ACAGGGGAATTATTAAAAAAGAAATTAAGTATGTAATGTATATTAAAGAATTTGATTTCTCAAATAAATTTAATTTAGAC
TTTGTTGTTTATAAAAAAGATCATCATTTTTATTCAAAACCAATTTATGATAGTAGTTTAGAATTGCAAACAATTTCTTC
ACTAACTTCCAAATCTAATTTTATGAAAGTTAAATTAGCAAACATCTTTTTTAATTATTTAAGTAAAAGTGCTGTTTTTA
GTATAAAAAAACTATCAATAAAACAAAGTGAAAAATTCTTAAAATTTTATAAAACACAGACTAATAAAAGAAAGGTTATT
AAAGTTTTAAATTTAAATCTTAAAAAAGAAATTAAACCTGAGAATTTTGTCATAAAAGCTCAAATAATTTGTGAAATACT
TTTTAAAAACCCAATAATTCATCATTTTGTACATGAATATTTAAAAATTTTTCAAAATATATTTTCTCAAGAAGAAAAAG
ATAATTAA

Upstream 100 bases:

>100_bases
GAATTGTTGATTTAAATCGAAAATCATTTGTTAAATAAAATACCAAGTCTAAAACTTGGTATTTTTCACAGATAAGTTAA
TAATAGTAAAAGAGATAGTG

Downstream 100 bases:

>100_bases
AACTAAGGATTTAAAATTAAGTAATGAATTTAAAAGAAATTAAAATTAAAATTAACGATGCCAATCAACGTTTAGATCGT
TTTTTATTAAAAAATTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKICDNISEINDDQDLVFIDIEATDSKGEQRIIQFSGYRLNIKKNKIFNFNKKFNPEQEINSRIKTLLNFNKNFNNIEQM
PKLDKQAAREIYCFVKNAIVITFTDFDIKKMHELFTYYNFDFEKIVYFDVYKFFEKKLQTKSVPSLFSLGILSGIKINFF
KLHNALYDAFILKEIFMCIRHKTNEELYEMYRYYEFLPKIISSSYFVTNEQEKNRGIIKKEIKYVMYIKEFDFSNKFNLD
FVVYKKDHHFYSKPIYDSSLELQTISSLTSKSNFMKVKLANIFFNYLSKSAVFSIKKLSIKQSEKFLKFYKTQTNKRKVI
KVLNLNLKKEIKPENFVIKAQIICEILFKNPIIHHFVHEYLKIFQNIFSQEEKDN

Sequences:

>Translated_375_residues
MKICDNISEINDDQDLVFIDIEATDSKGEQRIIQFSGYRLNIKKNKIFNFNKKFNPEQEINSRIKTLLNFNKNFNNIEQM
PKLDKQAAREIYCFVKNAIVITFTDFDIKKMHELFTYYNFDFEKIVYFDVYKFFEKKLQTKSVPSLFSLGILSGIKINFF
KLHNALYDAFILKEIFMCIRHKTNEELYEMYRYYEFLPKIISSSYFVTNEQEKNRGIIKKEIKYVMYIKEFDFSNKFNLD
FVVYKKDHHFYSKPIYDSSLELQTISSLTSKSNFMKVKLANIFFNYLSKSAVFSIKKLSIKQSEKFLKFYKTQTNKRKVI
KVLNLNLKKEIKPENFVIKAQIICEILFKNPIIHHFVHEYLKIFQNIFSQEEKDN
>Mature_375_residues
MKICDNISEINDDQDLVFIDIEATDSKGEQRIIQFSGYRLNIKKNKIFNFNKKFNPEQEINSRIKTLLNFNKNFNNIEQM
PKLDKQAAREIYCFVKNAIVITFTDFDIKKMHELFTYYNFDFEKIVYFDVYKFFEKKLQTKSVPSLFSLGILSGIKINFF
KLHNALYDAFILKEIFMCIRHKTNEELYEMYRYYEFLPKIISSSYFVTNEQEKNRGIIKKEIKYVMYIKEFDFSNKFNLD
FVVYKKDHHFYSKPIYDSSLELQTISSLTSKSNFMKVKLANIFFNYLSKSAVFSIKKLSIKQSEKFLKFYKTQTNKRKVI
KVLNLNLKKEIKPENFVIKAQIICEILFKNPIIHHFVHEYLKIFQNIFSQEEKDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y112_UREPA (Q9PR32)

Other databases:

- EMBL:   AF222894
- RefSeq:   NP_077943.1
- ProteinModelPortal:   Q9PR32
- GeneID:   876005
- GenomeReviews:   AF222894_GR
- KEGG:   uur:UU112
- HOGENOM:   HBG734354
- OMA:   SSAIDEH
- ProtClustDB:   CLSK336888
- BioCyc:   UURE95667:UU112-MONOMER
- InterPro:   IPR012337

Pfam domain/function: SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 45109; Mature: 45109

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKICDNISEINDDQDLVFIDIEATDSKGEQRIIQFSGYRLNIKKNKIFNFNKKFNPEQEI
CCCCCCHHHCCCCCCEEEEEEEECCCCCCCEEEEECCEEEEEECCCEEECCCCCCCHHHH
NSRIKTLLNFNKNFNNIEQMPKLDKQAAREIYCFVKNAIVITFTDFDIKKMHELFTYYNF
HHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHEECEEEEEEECCCHHHHHHHHHHHCC
DFEKIVYFDVYKFFEKKLQTKSVPSLFSLGILSGIKINFFKLHNALYDAFILKEIFMCIR
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHH
HKTNEELYEMYRYYEFLPKIISSSYFVTNEQEKNRGIIKKEIKYVMYIKEFDFSNKFNLD
CCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHEEEEEECCCCCCCCEE
FVVYKKDHHFYSKPIYDSSLELQTISSLTSKSNFMKVKLANIFFNYLSKSAVFSIKKLSI
EEEEECCCCEECCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
KQSEKFLKFYKTQTNKRKVIKVLNLNLKKEIKPENFVIKAQIICEILFKNPIIHHFVHEY
HHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHH
LKIFQNIFSQEEKDN
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MKICDNISEINDDQDLVFIDIEATDSKGEQRIIQFSGYRLNIKKNKIFNFNKKFNPEQEI
CCCCCCHHHCCCCCCEEEEEEEECCCCCCCEEEEECCEEEEEECCCEEECCCCCCCHHHH
NSRIKTLLNFNKNFNNIEQMPKLDKQAAREIYCFVKNAIVITFTDFDIKKMHELFTYYNF
HHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHEECEEEEEEECCCHHHHHHHHHHHCC
DFEKIVYFDVYKFFEKKLQTKSVPSLFSLGILSGIKINFFKLHNALYDAFILKEIFMCIR
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHH
HKTNEELYEMYRYYEFLPKIISSSYFVTNEQEKNRGIIKKEIKYVMYIKEFDFSNKFNLD
CCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHEEEEEECCCCCCCCEE
FVVYKKDHHFYSKPIYDSSLELQTISSLTSKSNFMKVKLANIFFNYLSKSAVFSIKKLSI
EEEEECCCCEECCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH
KQSEKFLKFYKTQTNKRKVIKVLNLNLKKEIKPENFVIKAQIICEILFKNPIIHHFVHEY
HHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHH
LKIFQNIFSQEEKDN
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11048724