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The map label for this gene is rsgA

Identifier: 170762079

GI number: 170762079

Start: 259637

End: 260548

Strand: Direct

Name: rsgA

Synonym: UPA3_0224

Alternate gene names: 170762079

Gene position: 259637-260548 (Clockwise)

Preceding gene: 170761933

Following gene: 170762016

Centisome position: 34.54

GC content: 25.88

Gene sequence:

>912_bases
GTGCGGGCAAAGATTATTTCGGTTGTTGCTAATAATTTTTATGTACATCTTTATGATTTAAAAATTCAGATAAAAGCAAT
TCCCAAAGGGATTTTTAAACATAACAGTCATGAATTAAAACCAATGGTTGGGGATGATGTTGAAGTTGAATTAATTGGGA
ATACTTATTTAATCACAAAAATTTATGAACGTTATAATCAATTAATTCGTCCCAAAGTTGCAAATATTGATATTGTTTTA
ATCGTAGTCTCTATTGTACAACCAGATTTAAATACATTGAGTTTAAACAAATATTTAGCTTTTTATGAAGCTCGCAATAT
TAAAAATGTTTTAATAGGTTTGAGTAAATATGATTTAGCCAATAATCATTTAAAACAAAAAATTAATAAGTTAATTTTAG
ATTATAAAAAAAATAACTATGCGGTTTTTATATTAACAAAAGAAAATGATATTTTATTATTAAAAGAAAAGATTAAAAGC
AAGACACTTTGTTTGGCAGGAAATTCAGGCGTAGGTAAATCAACATTAATTAATAAATTAGATCCAAGCATTCAACAACG
TACACAGGAAATATCACATTTTCTGAATCGAGGAAAACACACAACAACAAGTACCAAACTAATTAGTTTTGCTAATGGCT
TTTTAGTTGATACACCGGGTTTTGGAAATTTAGAGGTTAATTTAACCAAGAATGAAATGGCTAATGCCTTTAATGATTTT
GCAAATTATGCACGTTTTTGTAAATTTTCTAATTGTTTACATATTGAAGAACCAGAATGTGCTATTAAAAAAGCTGTTGA
TGAAAAATTAATTGTTAATTGACGATATGATGACTATTTAAAAATAATAAAAGAATTACCAAATGATGTGTTGAAAATAA
AAACACGTGCTCAAAATAGAAAATGTAAATAA

Upstream 100 bases:

>100_bases
TACAAAAATGATTTATTATTCTTATTAGTTGTTTATCGGTTATTCTAATCATTTTATTAATTATTATTTTATTTTTTAAA
AAAAGTGGGGCAATCTAATT

Downstream 100 bases:

>100_bases
ATAATTCTAATTCTTTAGTTGCAAAAATACTTTTTATAATTCGCTTGTGCTTGCTTTTTATTTTTTTAGTACTATAATAG
TAATATGTACTTAAAAATTA

Product: ribosome small subunit-dependent GTPase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRAKIISVVANNFYVHLYDLKIQIKAIPKGIFKHNSHELKPMVGDDVEVELIGNTYLITKIYERYNQLIRPKVANIDIVL
IVVSIVQPDLNTLSLNKYLAFYEARNIKNVLIGLSKYDLANNHLKQKINKLILDYKKNNYAVFILTKENDILLLKEKIKS
KTLCLAGNSGVGKSTLINKLDPSIQQRTQEISHFLNRGKHTTTSTKLISFANGFLVDTPGFGNLEVNLTKNEMANAFNDF
ANYARFCKFSNCLHIEEPECAIKKAVDEKLIVNWRYDDYLKIIKELPNDVLKIKTRAQNRKCK

Sequences:

>Translated_303_residues
MRAKIISVVANNFYVHLYDLKIQIKAIPKGIFKHNSHELKPMVGDDVEVELIGNTYLITKIYERYNQLIRPKVANIDIVL
IVVSIVQPDLNTLSLNKYLAFYEARNIKNVLIGLSKYDLANNHLKQKINKLILDYKKNNYAVFILTKENDILLLKEKIKS
KTLCLAGNSGVGKSTLINKLDPSIQQRTQEISHFLNRGKHTTTSTKLISFANGFLVDTPGFGNLEVNLTKNEMANAFNDF
ANYARFCKFSNCLHIEEPECAIKKAVDEKLIVN*RYDDYLKIIKELPNDVLKIKTRAQNRKCK
>Mature_303_residues
MRAKIISVVANNFYVHLYDLKIQIKAIPKGIFKHNSHELKPMVGDDVEVELIGNTYLITKIYERYNQLIRPKVANIDIVL
IVVSIVQPDLNTLSLNKYLAFYEARNIKNVLIGLSKYDLANNHLKQKINKLILDYKKNNYAVFILTKENDILLLKEKIKS
KTLCLAGNSGVGKSTLINKLDPSIQQRTQEISHFLNRGKHTTTSTKLISFANGFLVDTPGFGNLEVNLTKNEMANAFNDF
ANYARFCKFSNCLHIEEPECAIKKAVDEKLIVN*RYDDYLKIIKELPNDVLKIKTRAQNRKCK

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=254, Percent_Identity=29.9212598425197, Blast_Score=114, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 34557; Mature: 34557

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAKIISVVANNFYVHLYDLKIQIKAIPKGIFKHNSHELKPMVGDDVEVELIGNTYLITK
CCCEEEEEEECCEEEEEEEEEEEEEECCCHHHCCCCCCCCCCCCCCEEEEEECCEEHHHH
IYERYNQLIRPKVANIDIVLIVVSIVQPDLNTLSLNKYLAFYEARNIKNVLIGLSKYDLA
HHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCEEEHHHHHHHHHHCCHHHHHEECHHHHHH
NNHLKQKINKLILDYKKNNYAVFILTKENDILLLKEKIKSKTLCLAGNSGVGKSTLINKL
HHHHHHHHHHHHHEEECCCEEEEEEECCCCEEEEEHHHCCCEEEEECCCCCCHHHHHHHC
DPSIQQRTQEISHFLNRGKHTTTSTKLISFANGFLVDTPGFGNLEVNLTKNEMANAFNDF
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEECCCCCCEEEEEEHHHHHHHHHHH
ANYARFCKFSNCLHIEEPECAIKKAVDEKLIVNRYDDYLKIIKELPNDVLKIKTRAQNRK
HHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHCCCCC
CK
CC
>Mature Secondary Structure
MRAKIISVVANNFYVHLYDLKIQIKAIPKGIFKHNSHELKPMVGDDVEVELIGNTYLITK
CCCEEEEEEECCEEEEEEEEEEEEEECCCHHHCCCCCCCCCCCCCCEEEEEECCEEHHHH
IYERYNQLIRPKVANIDIVLIVVSIVQPDLNTLSLNKYLAFYEARNIKNVLIGLSKYDLA
HHHHHHHHHCCCCCCCEEEEEEEEHHCCCCCEEEHHHHHHHHHHCCHHHHHEECHHHHHH
NNHLKQKINKLILDYKKNNYAVFILTKENDILLLKEKIKSKTLCLAGNSGVGKSTLINKL
HHHHHHHHHHHHHEEECCCEEEEEEECCCCEEEEEHHHCCCEEEEECCCCCCHHHHHHHC
DPSIQQRTQEISHFLNRGKHTTTSTKLISFANGFLVDTPGFGNLEVNLTKNEMANAFNDF
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEECCCCCCEEEEEEHHHHHHHHHHH
ANYARFCKFSNCLHIEEPECAIKKAVDEKLIVNRYDDYLKIIKELPNDVLKIKTRAQNRK
HHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHCCCCC
CK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA