Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
---|---|
Accession | NC_010503 |
Length | 751,679 |
Click here to switch to the map view.
The map label for this gene is 170761980
Identifier: 170761980
GI number: 170761980
Start: 264057
End: 265343
Strand: Direct
Name: 170761980
Synonym: UPA3_0227
Alternate gene names: NA
Gene position: 264057-265343 (Clockwise)
Preceding gene: 170761982
Following gene: 170762049
Centisome position: 35.13
GC content: 22.3
Gene sequence:
>1287_bases ATGCCACGAATAAATACGCAAGTTTTTAATGAAAATAATGATAAAAATAGAATTAAAAGTAATAACAATAAAATTTGTGA TGATATTGAATACACTCGCTTATTAGAAACGAAAGAATATAATGCTGGTTTTTCTCCTAATAATGATTCACAAGATATCT TAATTAAAAAACAAGACAATATTTTAAAGTTAAAACCAACTCTAAATTTTGATGATAGTGATCAATTAATTTCAATTGTT CCTACTAAAAATTATGAAAATTTAAGATTAAAAGAAATTGAAATCGATAAAAAAAACACTGTTGATTATCAATTAAAAAA AGAAATAATAGATCAGGACTTAACAGATGATAATCATTTATCTATAAGTCAAAAATCCAATGGTTTTGCTTTAAAAACTA AACAATTTATTCCTCAAAATATTTCAGAATTTATTTATCATAATGAAGACGATCCAAAAACATACGGAAGTGAAAATAAT TTAACTTTTAGTCAACTAGAAGAAAAAGTTAATCAAAAAAATACACCTGATTTTTATTTAAAAGAAATTCATGCAGTTCG TAACAAAATTATCATTTGAACTATTTTATTAGCAATTGGCGTAGGATTAATATTTTATTTGATTTATGAAGTTATTATTA ATCATTTTAATCCATGGATTTTTTTACCAATTAGTATTTATTGTGTCTTGATGATTTTCTTTTTAGCTTTATCATGTAGT AATTTTATAAATTTTAAAAAAGAAATGGATTATCAAAAAAACCATTTTGATTGTACAAAAGCAACAAATTTTATTGTAGG TATATATCGTAAATTAATAGTAGTACATATTAATGTAAACTGAATCACAGCTTATATTTATCTTACTAGTCTTTTTATGA TATTTGGTGTTTTTGTTGTCAGTTATTTTATGAATTTATATTATAATGCAGCTATAGGAAGTCGTTTTGGTGATTTGATT ATAAAAATTCCTGTTGTTATTAATAATCATCTTTCACAAAAAATTAGTTTTAACAAAAATCCATTATGGGCAATGATTGG ATTAGGTGCTATTTTAGGATTAACATTTATTATTCATTTATGGTTGGTTTTTAATGCTCATCATCGTATTAATCGTATTC ATAGTTATTATGTTAATGAAATCATTACTAGTGAAGAAATAATTTCATTAAAAAAACAAGCAAATCGTCGTGGTCTAGTC ATATTTTTAGTGTTAACTGTTATTTTAGGTTTAATTTTTTATTTGATGTATACTATTTTAAAAAGAAAATACACTATCAA AAAATAA
Upstream 100 bases:
>100_bases GTATTTCATAATTAAGAAGTTAATTAAAACTAACTTCTTTTTTATTTATAATTTATAATTGATGAAATAGTAATATTTAT CTTAAATGGGGGATCAATGA
Downstream 100 bases:
>100_bases AAGAAGGTTTATATATGGCAAAAATTATTGAAGAAATGATTAATAAAAAAGGGTTGTTAATTGATGATTATGAACTTTAT GGCAATGAGATTGCTAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MPRINTQVFNENNDKNRIKSNNNKICDDIEYTRLLETKEYNAGFSPNNDSQDILIKKQDNILKLKPTLNFDDSDQLISIV PTKNYENLRLKEIEIDKKNTVDYQLKKEIIDQDLTDDNHLSISQKSNGFALKTKQFIPQNISEFIYHNEDDPKTYGSENN LTFSQLEEKVNQKNTPDFYLKEIHAVRNKIIIWTILLAIGVGLIFYLIYEVIINHFNPWIFLPISIYCVLMIFFLALSCS NFINFKKEMDYQKNHFDCTKATNFIVGIYRKLIVVHINVNWITAYIYLTSLFMIFGVFVVSYFMNLYYNAAIGSRFGDLI IKIPVVINNHLSQKISFNKNPLWAMIGLGAILGLTFIIHLWLVFNAHHRINRIHSYYVNEIITSEEIISLKKQANRRGLV IFLVLTVILGLIFYLMYTILKRKYTIKK
Sequences:
>Translated_428_residues MPRINTQVFNENNDKNRIKSNNNKICDDIEYTRLLETKEYNAGFSPNNDSQDILIKKQDNILKLKPTLNFDDSDQLISIV PTKNYENLRLKEIEIDKKNTVDYQLKKEIIDQDLTDDNHLSISQKSNGFALKTKQFIPQNISEFIYHNEDDPKTYGSENN LTFSQLEEKVNQKNTPDFYLKEIHAVRNKIII*TILLAIGVGLIFYLIYEVIINHFNPWIFLPISIYCVLMIFFLALSCS NFINFKKEMDYQKNHFDCTKATNFIVGIYRKLIVVHINVN*ITAYIYLTSLFMIFGVFVVSYFMNLYYNAAIGSRFGDLI IKIPVVINNHLSQKISFNKNPLWAMIGLGAILGLTFIIHLWLVFNAHHRINRIHSYYVNEIITSEEIISLKKQANRRGLV IFLVLTVILGLIFYLMYTILKRKYTIKK >Mature_427_residues PRINTQVFNENNDKNRIKSNNNKICDDIEYTRLLETKEYNAGFSPNNDSQDILIKKQDNILKLKPTLNFDDSDQLISIVP TKNYENLRLKEIEIDKKNTVDYQLKKEIIDQDLTDDNHLSISQKSNGFALKTKQFIPQNISEFIYHNEDDPKTYGSENNL TFSQLEEKVNQKNTPDFYLKEIHAVRNKIII*TILLAIGVGLIFYLIYEVIINHFNPWIFLPISIYCVLMIFFLALSCSN FINFKKEMDYQKNHFDCTKATNFIVGIYRKLIVVHINVN*ITAYIYLTSLFMIFGVFVVSYFMNLYYNAAIGSRFGDLII KIPVVINNHLSQKISFNKNPLWAMIGLGAILGLTFIIHLWLVFNAHHRINRIHSYYVNEIITSEEIISLKKQANRRGLVI FLVLTVILGLIFYLMYTILKRKYTIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49783; Mature: 49652
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRINTQVFNENNDKNRIKSNNNKICDDIEYTRLLETKEYNAGFSPNNDSQDILIKKQDN CCCCCCEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC ILKLKPTLNFDDSDQLISIVPTKNYENLRLKEIEIDKKNTVDYQLKKEIIDQDLTDDNHL EEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCE SISQKSNGFALKTKQFIPQNISEFIYHNEDDPKTYGSENNLTFSQLEEKVNQKNTPDFYL EEEECCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH KEIHAVRNKIIITILLAIGVGLIFYLIYEVIINHFNPWIFLPISIYCVLMIFFLALSCSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH FINFKKEMDYQKNHFDCTKATNFIVGIYRKLIVVHINVNITAYIYLTSLFMIFGVFVVSY HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCEEHHHHHHHHHHHHHHHHHHH FMNLYYNAAIGSRFGDLIIKIPVVINNHLSQKISFNKNPLWAMIGLGAILGLTFIIHLWL HHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH VFNAHHRINRIHSYYVNEIITSEEIISLKKQANRRGLVIFLVLTVILGLIFYLMYTILKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KYTIKK HCCCCC >Mature Secondary Structure PRINTQVFNENNDKNRIKSNNNKICDDIEYTRLLETKEYNAGFSPNNDSQDILIKKQDN CCCCCEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC ILKLKPTLNFDDSDQLISIVPTKNYENLRLKEIEIDKKNTVDYQLKKEIIDQDLTDDNHL EEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCE SISQKSNGFALKTKQFIPQNISEFIYHNEDDPKTYGSENNLTFSQLEEKVNQKNTPDFYL EEEECCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHH KEIHAVRNKIIITILLAIGVGLIFYLIYEVIINHFNPWIFLPISIYCVLMIFFLALSCSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHH FINFKKEMDYQKNHFDCTKATNFIVGIYRKLIVVHINVNITAYIYLTSLFMIFGVFVVSY HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCEEHHHHHHHHHHHHHHHHHHH FMNLYYNAAIGSRFGDLIIKIPVVINNHLSQKISFNKNPLWAMIGLGAILGLTFIIHLWL HHHHHHHHHHHCCCCCEEEEEHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH VFNAHHRINRIHSYYVNEIITSEEIISLKKQANRRGLVIFLVLTVILGLIFYLMYTILKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KYTIKK HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA