Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is glmM

Identifier: 170757799

GI number: 170757799

Start: 3731491

End: 3732840

Strand: Reverse

Name: glmM

Synonym: CLD_1086

Alternate gene names: 170757799

Gene position: 3732840-3731491 (Counterclockwise)

Preceding gene: 170757210

Following gene: 170757019

Centisome position: 94.31

GC content: 31.63

Gene sequence:

>1350_bases
ATGGGTAGAATGTTCGGAACAGATGGAGTCAGAGGAGTAGCTAATAAGGAATTAACAGCAGACTTAGCATATAAATTAGG
TAAAGCAGGAGCTTTTATATTGACAGAAGGAACACATAGACCTAAGATACTTGTAGGTATGGATACAAGAATATCAGGGG
ACATGCTAGAGAGTGCTTTAGTAGCAGGTATATTATCTGTAGGAGCAGAAGCTATTTGTGTAGGTGTAATACCAACACCA
GCAATAGCTTACTTAACAAGAAAATATAATGCGGATGCAGGGGTTGTTATTTCAGCATCACATAATCCAGTAGAATACAA
TGGTATAAAGTTTTTTAATAAAAATGGATACAAATTATCCGATGAATTAGAAGATAGTATACAAGCATTAATAAGAGATG
ATTTTAAGGATGTTCCAGTTTTAACTGGAGAAAATATAGGAAGAAAGATTGAAGAAGATGGAGAGGCTATAAGAGATTAC
ATAGATTTTGCTAAATCAACTATAAAGGGTGATTTGAAAGGATTAAAAGTAACTTTAGATTGTGCTAATGGAGCATCATA
TATAACATCTGTAGAAGCTTTTAAAGAATTAGGAGCAGAAGTTCATGTTATAAACAATAAACCTGATGGTATAAATATAA
ATAGAAACTCTGGCTCAACACATCCAGAAGATCTTATGGAGTATGTAGTTAAAAATAATTGCCACATGGGATTAGCCTTT
GATGGAGATGCGGATAGATGTCTAGCCATAGATGAAAAAGGTAATTTGATAAATGGAGACTTTATATTAGCCATTTGTGG
TAAGGAATTAAAAAGACAAGGTAGATTAAAGAAAAATACAATAGTAGTTACTGTAATGAGTAATCTTGGATTAGATATAG
CTATGAAAAAAGAAGAAATAAATACTATAAAAACGAAAGTTGGAGATAGATATGTCCTAGAAGAAATGCTTAAAAATGAC
TATGCAATAGGTGGAGAACAATCAGGACATATTATATTCTCAGATTATAATACTACAGGAGATGGACTTGTAACTGCTCT
ACAATTAGCTCATATAGTAAAAGAAAGTGGTAAGACTTTTTCAGAACTATGTTCTATAATGAAAGAACTACCACAAGTTT
TAGTTAATGCTAAAGTTCCTAATGATCAAAAAGATATTTATTTGAAGGATGAAGAAATAAAATCTGAAATAGATACAATT
ACAAAAAATTTAGATGGCTCAGGAAGAGTGCTTATAAGACCTTCTGGTACAGAGCCTTTAGTAAGAGTAATGCTTGAAGG
GGAAAACCAAAAGGAAATTGATAAATTAGCACATGGCTTAGCTAAATTAATAGAGAATAAAGTAAAATAA

Upstream 100 bases:

>100_bases
ACTGGCTTTTTATATTTTTCAATTATGTTTCCTATTGTTAGAATTAGTAAACTATAATATAATATCTATGTGTATTTAAA
AAATAGGAGTGATGAATTAC

Downstream 100 bases:

>100_bases
TAGCATTAATTTATATTTTTAAAACATAAGGGTAATTTATAATTATTAGGTTAATTATAAATTGCCCTTATGTTTTTTAT
TATAATAAATAAAATTAAAA

Product: phosphoglucosamine mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MGRMFGTDGVRGVANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTP
AIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDY
IDFAKSTIKGDLKGLKVTLDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF
DGDADRCLAIDEKGNLINGDFILAICGKELKRQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKND
YAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTI
TKNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK

Sequences:

>Translated_449_residues
MGRMFGTDGVRGVANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTP
AIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDY
IDFAKSTIKGDLKGLKVTLDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF
DGDADRCLAIDEKGNLINGDFILAICGKELKRQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKND
YAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTI
TKNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK
>Mature_448_residues
GRMFGTDGVRGVANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTPA
IAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYI
DFAKSTIKGDLKGLKVTLDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAFD
GDADRCLAIDEKGNLINGDFILAICGKELKRQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKNDY
AIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTIT
KNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK

Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]

COG id: COG1109

COG function: function code G; Phosphomannomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphohexose mutase family [H]

Homologues:

Organism=Escherichia coli, GI1789566, Length=446, Percent_Identity=43.4977578475336, Blast_Score=335, Evalue=3e-93,
Organism=Escherichia coli, GI1788361, Length=450, Percent_Identity=30.8888888888889, Blast_Score=158, Evalue=7e-40,
Organism=Drosophila melanogaster, GI17864244, Length=321, Percent_Identity=26.1682242990654, Blast_Score=73, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005844
- InterPro:   IPR016055
- InterPro:   IPR005845
- InterPro:   IPR005846
- InterPro:   IPR005843
- InterPro:   IPR016066
- InterPro:   IPR005841
- InterPro:   IPR006352 [H]

Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]

EC number: =5.4.2.10 [H]

Molecular weight: Translated: 48948; Mature: 48817

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00710 PGM_PMM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRMFGTDGVRGVANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESAL
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHH
VAGILSVGAEAICVGVIPTPAIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLS
HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCEEECCEEEECCCCCEEH
DELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYIDFAKSTIKGDLKGLKVTLD
HHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
CANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF
ECCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEE
DGDADRCLAIDEKGNLINGDFILAICGKELKRQGRLKKNTIVVTVMSNLGLDIAMKKEEI
CCCCCCEEEEECCCCEECCCEEEEECCHHHHHCCCCCCCEEEEEEHHHCCCEEEECHHHH
NTIKTKVGDRYVLEEMLKNDYAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTF
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCH
SELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTITKNLDGSGRVLIRPSGTEPL
HHHHHHHHHHHHHHEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH
VRVMLEGENQKEIDKLAHGLAKLIENKVK
EEEEECCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRMFGTDGVRGVANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESAL
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHH
VAGILSVGAEAICVGVIPTPAIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLS
HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCEEECCEEEECCCCCEEH
DELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYIDFAKSTIKGDLKGLKVTLD
HHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
CANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF
ECCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEE
DGDADRCLAIDEKGNLINGDFILAICGKELKRQGRLKKNTIVVTVMSNLGLDIAMKKEEI
CCCCCCEEEEECCCCEECCCEEEEECCHHHHHCCCCCCCEEEEEEHHHCCCEEEECHHHH
NTIKTKVGDRYVLEEMLKNDYAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTF
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCH
SELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTITKNLDGSGRVLIRPSGTEPL
HHHHHHHHHHHHHHEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH
VRVMLEGENQKEIDKLAHGLAKLIENKVK
EEEEECCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA