| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is glmM
Identifier: 170757799
GI number: 170757799
Start: 3731491
End: 3732840
Strand: Reverse
Name: glmM
Synonym: CLD_1086
Alternate gene names: 170757799
Gene position: 3732840-3731491 (Counterclockwise)
Preceding gene: 170757210
Following gene: 170757019
Centisome position: 94.31
GC content: 31.63
Gene sequence:
>1350_bases ATGGGTAGAATGTTCGGAACAGATGGAGTCAGAGGAGTAGCTAATAAGGAATTAACAGCAGACTTAGCATATAAATTAGG TAAAGCAGGAGCTTTTATATTGACAGAAGGAACACATAGACCTAAGATACTTGTAGGTATGGATACAAGAATATCAGGGG ACATGCTAGAGAGTGCTTTAGTAGCAGGTATATTATCTGTAGGAGCAGAAGCTATTTGTGTAGGTGTAATACCAACACCA GCAATAGCTTACTTAACAAGAAAATATAATGCGGATGCAGGGGTTGTTATTTCAGCATCACATAATCCAGTAGAATACAA TGGTATAAAGTTTTTTAATAAAAATGGATACAAATTATCCGATGAATTAGAAGATAGTATACAAGCATTAATAAGAGATG ATTTTAAGGATGTTCCAGTTTTAACTGGAGAAAATATAGGAAGAAAGATTGAAGAAGATGGAGAGGCTATAAGAGATTAC ATAGATTTTGCTAAATCAACTATAAAGGGTGATTTGAAAGGATTAAAAGTAACTTTAGATTGTGCTAATGGAGCATCATA TATAACATCTGTAGAAGCTTTTAAAGAATTAGGAGCAGAAGTTCATGTTATAAACAATAAACCTGATGGTATAAATATAA ATAGAAACTCTGGCTCAACACATCCAGAAGATCTTATGGAGTATGTAGTTAAAAATAATTGCCACATGGGATTAGCCTTT GATGGAGATGCGGATAGATGTCTAGCCATAGATGAAAAAGGTAATTTGATAAATGGAGACTTTATATTAGCCATTTGTGG TAAGGAATTAAAAAGACAAGGTAGATTAAAGAAAAATACAATAGTAGTTACTGTAATGAGTAATCTTGGATTAGATATAG CTATGAAAAAAGAAGAAATAAATACTATAAAAACGAAAGTTGGAGATAGATATGTCCTAGAAGAAATGCTTAAAAATGAC TATGCAATAGGTGGAGAACAATCAGGACATATTATATTCTCAGATTATAATACTACAGGAGATGGACTTGTAACTGCTCT ACAATTAGCTCATATAGTAAAAGAAAGTGGTAAGACTTTTTCAGAACTATGTTCTATAATGAAAGAACTACCACAAGTTT TAGTTAATGCTAAAGTTCCTAATGATCAAAAAGATATTTATTTGAAGGATGAAGAAATAAAATCTGAAATAGATACAATT ACAAAAAATTTAGATGGCTCAGGAAGAGTGCTTATAAGACCTTCTGGTACAGAGCCTTTAGTAAGAGTAATGCTTGAAGG GGAAAACCAAAAGGAAATTGATAAATTAGCACATGGCTTAGCTAAATTAATAGAGAATAAAGTAAAATAA
Upstream 100 bases:
>100_bases ACTGGCTTTTTATATTTTTCAATTATGTTTCCTATTGTTAGAATTAGTAAACTATAATATAATATCTATGTGTATTTAAA AAATAGGAGTGATGAATTAC
Downstream 100 bases:
>100_bases TAGCATTAATTTATATTTTTAAAACATAAGGGTAATTTATAATTATTAGGTTAATTATAAATTGCCCTTATGTTTTTTAT TATAATAAATAAAATTAAAA
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MGRMFGTDGVRGVANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTP AIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDY IDFAKSTIKGDLKGLKVTLDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF DGDADRCLAIDEKGNLINGDFILAICGKELKRQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKND YAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTI TKNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK
Sequences:
>Translated_449_residues MGRMFGTDGVRGVANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTP AIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDY IDFAKSTIKGDLKGLKVTLDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF DGDADRCLAIDEKGNLINGDFILAICGKELKRQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKND YAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTI TKNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK >Mature_448_residues GRMFGTDGVRGVANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESALVAGILSVGAEAICVGVIPTPA IAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLSDELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYI DFAKSTIKGDLKGLKVTLDCANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAFD GDADRCLAIDEKGNLINGDFILAICGKELKRQGRLKKNTIVVTVMSNLGLDIAMKKEEINTIKTKVGDRYVLEEMLKNDY AIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTFSELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTIT KNLDGSGRVLIRPSGTEPLVRVMLEGENQKEIDKLAHGLAKLIENKVK
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1789566, Length=446, Percent_Identity=43.4977578475336, Blast_Score=335, Evalue=3e-93, Organism=Escherichia coli, GI1788361, Length=450, Percent_Identity=30.8888888888889, Blast_Score=158, Evalue=7e-40, Organism=Drosophila melanogaster, GI17864244, Length=321, Percent_Identity=26.1682242990654, Blast_Score=73, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 48948; Mature: 48817
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRMFGTDGVRGVANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESAL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHH VAGILSVGAEAICVGVIPTPAIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLS HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCEEECCEEEECCCCCEEH DELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYIDFAKSTIKGDLKGLKVTLD HHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE CANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF ECCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEE DGDADRCLAIDEKGNLINGDFILAICGKELKRQGRLKKNTIVVTVMSNLGLDIAMKKEEI CCCCCCEEEEECCCCEECCCEEEEECCHHHHHCCCCCCCEEEEEEHHHCCCEEEECHHHH NTIKTKVGDRYVLEEMLKNDYAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTF HHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCH SELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTITKNLDGSGRVLIRPSGTEPL HHHHHHHHHHHHHHEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH VRVMLEGENQKEIDKLAHGLAKLIENKVK EEEEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRMFGTDGVRGVANKELTADLAYKLGKAGAFILTEGTHRPKILVGMDTRISGDMLESAL CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHH VAGILSVGAEAICVGVIPTPAIAYLTRKYNADAGVVISASHNPVEYNGIKFFNKNGYKLS HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCEEECCEEEECCCCCEEH DELEDSIQALIRDDFKDVPVLTGENIGRKIEEDGEAIRDYIDFAKSTIKGDLKGLKVTLD HHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE CANGASYITSVEAFKELGAEVHVINNKPDGININRNSGSTHPEDLMEYVVKNNCHMGLAF ECCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEE DGDADRCLAIDEKGNLINGDFILAICGKELKRQGRLKKNTIVVTVMSNLGLDIAMKKEEI CCCCCCEEEEECCCCEECCCEEEEECCHHHHHCCCCCCCEEEEEEHHHCCCEEEECHHHH NTIKTKVGDRYVLEEMLKNDYAIGGEQSGHIIFSDYNTTGDGLVTALQLAHIVKESGKTF HHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCH SELCSIMKELPQVLVNAKVPNDQKDIYLKDEEIKSEIDTITKNLDGSGRVLIRPSGTEPL HHHHHHHHHHHHHHEECCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH VRVMLEGENQKEIDKLAHGLAKLIENKVK EEEEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA