| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is gutM
Identifier: 170757172
GI number: 170757172
Start: 3728671
End: 3729066
Strand: Reverse
Name: gutM
Synonym: CLD_1089
Alternate gene names: 170757172
Gene position: 3729066-3728671 (Counterclockwise)
Preceding gene: 170756957
Following gene: 170756315
Centisome position: 94.21
GC content: 28.03
Gene sequence:
>396_bases ATGTTTATAAAAATAGTAATTGTTATTGGACTTGCATGGCTTCTACAAACTGCATTAGGTTTTTTACAATTTAAAAATTT TAATAAAAATTTTAAAGAACTTAGACAAAAAGGAAGAGTAGTAATAGGGAAAAATAGGGGACGTGTAAAGAGGGGTTCAG TAATACTAATTGCTATTGATGATAATTGTTCTATACTTGAGAGCAGAATCATGAAAGGAATTACTATTTTAGCTAGATTT AAGCCTATGGAGATTTTGAACAATCAAAATCTCCATAGCATAAATCCTAATATATTGAAAAATTTGGACCAACAGACAGC TTTGGTCATACAAGATGGGATCAAAAATTATAATGAATATTATAAAACAAAGGAGGAGATTGATTCTAATTCATAA
Upstream 100 bases:
>100_bases AAAATCAAACTTGAAGAATTACCAGGGTATTTCCACAAAATGTTTAACAAAGAAATTAATTATAATAAGGTATTAGTTGA AATTTAGTAGAGGTGAATTT
Downstream 100 bases:
>100_bases TTGAGTCAATGAAAAACATTTTATTAAAAAGGAGATGAGTTTATGGATTTTTTAACTAATTTAGCAAAAGGTTTTATAGG TTTATTTCAAGAAGGTGGAA
Product: glucitol operon activator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MFIKIVIVIGLAWLLQTALGFLQFKNFNKNFKELRQKGRVVIGKNRGRVKRGSVILIAIDDNCSILESRIMKGITILARF KPMEILNNQNLHSINPNILKNLDQQTALVIQDGIKNYNEYYKTKEEIDSNS
Sequences:
>Translated_131_residues MFIKIVIVIGLAWLLQTALGFLQFKNFNKNFKELRQKGRVVIGKNRGRVKRGSVILIAIDDNCSILESRIMKGITILARF KPMEILNNQNLHSINPNILKNLDQQTALVIQDGIKNYNEYYKTKEEIDSNS >Mature_131_residues MFIKIVIVIGLAWLLQTALGFLQFKNFNKNFKELRQKGRVVIGKNRGRVKRGSVILIAIDDNCSILESRIMKGITILARF KPMEILNNQNLHSINPNILKNLDQQTALVIQDGIKNYNEYYKTKEEIDSNS
Specific function: Positive regulator for glucitol operon expression [H]
COG id: COG4578
COG function: function code K; Glucitol operon activator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789058, Length=103, Percent_Identity=33.9805825242718, Blast_Score=72, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009693 [H]
Pfam domain/function: PF06923 GutM [H]
EC number: NA
Molecular weight: Translated: 15063; Mature: 15063
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIKIVIVIGLAWLLQTALGFLQFKNFNKNFKELRQKGRVVIGKNRGRVKRGSVILIAID CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCEECCCEEEEEEC DNCSILESRIMKGITILARFKPMEILNNQNLHSINPNILKNLDQQTALVIQDGIKNYNEY CCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH YKTKEEIDSNS HHHHHHCCCCC >Mature Secondary Structure MFIKIVIVIGLAWLLQTALGFLQFKNFNKNFKELRQKGRVVIGKNRGRVKRGSVILIAID CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCEECCCEEEEEEC DNCSILESRIMKGITILARFKPMEILNNQNLHSINPNILKNLDQQTALVIQDGIKNYNEY CCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH YKTKEEIDSNS HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3062173; 9205837; 9278503 [H]