Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757157

Identifier: 170757157

GI number: 170757157

Start: 3670079

End: 3671023

Strand: Reverse

Name: 170757157

Synonym: CLD_1143

Alternate gene names: NA

Gene position: 3671023-3670079 (Counterclockwise)

Preceding gene: 170756920

Following gene: 170757518

Centisome position: 92.74

GC content: 32.91

Gene sequence:

>945_bases
ATGCAAATTATACTTTATTTAATTATGGGGATAATTATCGGAATGTTTTTCCCTATTCAGGCATCTATAAGTGCTCGGTT
AAGCTCTTACTCAAAAACACCATTAATAGCTTCGTTCATCGCATTTTCTTTAGGGTCGGTTATACTATTCATTATAAATT
TAATAGTAGATCCTGCAGGAATCAGTGTTGGGATTGATTTTTCATATCCATTGTATGTTTTTATCGGTGGAGCAATAACT
GGCGTTGGATTTAATGTGGCTAATATCATTCTTTTTTCAAAACTTGGCGCTTCAGTTACAACAATAATAACTGTAACTGG
GCAAATGGTTGTAGGAATTCTAATTGATCACTTTGGGTGGTTTGGTGTACCAGCTAATCCTATTAGTATTACTAGAACAA
CTGGGACTATCATTATGATTTTAGCTGTTTCATTGGTTCAACCTAAAAAGAAAAGAGATTTAACTACGGACTTAGAAGAA
GAGAAAAAGGATAGTAAAATTGTTTGGATAATTTTAGGAATTTTATCTGGGTTTTTACCACCATTACAAACCGCTATTAA
TGGAAAACTTCGTGTTGCAACAGGTTCACTTTTAGGAGCTACTTTTATTTCTTTCTTCGTTGGCGCCATTATCTTGCTTA
TTTTGATATTGATTACTCAGCGTCGCTTAGAGTTTCCTTTGTATGACACTCAAAAAAATCGCATTCCTATTTGGACATAC
ATGGGAGGTATATTTGGCATATTTATTCTAACAGGTAACATTGTCTTATTACCTGTACTTGGATCGGTTTTAACTACTAT
GATTTTTATATTGGGACAAATGATTATGGCATTAACAATCGATCAGCTTGGAATGTTTAATTTACAAAAAAGAAAAATTG
ATGGTAGAAGAATTGCTGCTCTAGTATTGACGGTTATTGGTATAATGTTTGTTAAGTTCTTGTAA

Upstream 100 bases:

>100_bases
ACTGTGATCGGTGGAGTTAAAAGACCGACTCTTGATTGTTATTTTAGAAAATAATTTTAATCCTAGTCATTAGAATCAAA
AAGTAAACGGAGGTAAATTT

Downstream 100 bases:

>100_bases
TCTTCTATGTAATCTACTCATGGATAATTTAAATTTTATACTGAATACAGCATGATTTCTCCTGCTGCTAGTGGTGACAG
CTGGAAGAGTTGGGGCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Orotate Transporter; Glycyl-TRNA Synthetase Beta Subunit

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MQIILYLIMGIIIGMFFPIQASISARLSSYSKTPLIASFIAFSLGSVILFIINLIVDPAGISVGIDFSYPLYVFIGGAIT
GVGFNVANIILFSKLGASVTTIITVTGQMVVGILIDHFGWFGVPANPISITRTTGTIIMILAVSLVQPKKKRDLTTDLEE
EKKDSKIVWIILGILSGFLPPLQTAINGKLRVATGSLLGATFISFFVGAIILLILILITQRRLEFPLYDTQKNRIPIWTY
MGGIFGIFILTGNIVLLPVLGSVLTTMIFILGQMIMALTIDQLGMFNLQKRKIDGRRIAALVLTVIGIMFVKFL

Sequences:

>Translated_314_residues
MQIILYLIMGIIIGMFFPIQASISARLSSYSKTPLIASFIAFSLGSVILFIINLIVDPAGISVGIDFSYPLYVFIGGAIT
GVGFNVANIILFSKLGASVTTIITVTGQMVVGILIDHFGWFGVPANPISITRTTGTIIMILAVSLVQPKKKRDLTTDLEE
EKKDSKIVWIILGILSGFLPPLQTAINGKLRVATGSLLGATFISFFVGAIILLILILITQRRLEFPLYDTQKNRIPIWTY
MGGIFGIFILTGNIVLLPVLGSVLTTMIFILGQMIMALTIDQLGMFNLQKRKIDGRRIAALVLTVIGIMFVKFL
>Mature_314_residues
MQIILYLIMGIIIGMFFPIQASISARLSSYSKTPLIASFIAFSLGSVILFIINLIVDPAGISVGIDFSYPLYVFIGGAIT
GVGFNVANIILFSKLGASVTTIITVTGQMVVGILIDHFGWFGVPANPISITRTTGTIIMILAVSLVQPKKKRDLTTDLEE
EKKDSKIVWIILGILSGFLPPLQTAINGKLRVATGSLLGATFISFFVGAIILLILILITQRRLEFPLYDTQKNRIPIWTY
MGGIFGIFILTGNIVLLPVLGSVLTTMIFILGQMIMALTIDQLGMFNLQKRKIDGRRIAALVLTVIGIMFVKFL

Specific function: Unknown

COG id: COG3238

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34232; Mature: 34232

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIILYLIMGIIIGMFFPIQASISARLSSYSKTPLIASFIAFSLGSVILFIINLIVDPAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ISVGIDFSYPLYVFIGGAITGVGFNVANIILFSKLGASVTTIITVTGQMVVGILIDHFGW
CEEEECCCCCCCEEECCHHHHCCHHHHHHHHHHHHCCCHHHHEEEHHHHHHHHHHHHCCC
FGVPANPISITRTTGTIIMILAVSLVQPKKKRDLTTDLEEEKKDSKIVWIILGILSGFLP
CCCCCCCEEEEECCHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCEEHHHHHHHHHCCH
PLQTAINGKLRVATGSLLGATFISFFVGAIILLILILITQRRLEFPLYDTQKNRIPIWTY
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
MGGIFGIFILTGNIVLLPVLGSVLTTMIFILGQMIMALTIDQLGMFNLQKRKIDGRRIAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH
LVLTVIGIMFVKFL
HHHHHHHHHHHHCC
>Mature Secondary Structure
MQIILYLIMGIIIGMFFPIQASISARLSSYSKTPLIASFIAFSLGSVILFIINLIVDPAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ISVGIDFSYPLYVFIGGAITGVGFNVANIILFSKLGASVTTIITVTGQMVVGILIDHFGW
CEEEECCCCCCCEEECCHHHHCCHHHHHHHHHHHHCCCHHHHEEEHHHHHHHHHHHHCCC
FGVPANPISITRTTGTIIMILAVSLVQPKKKRDLTTDLEEEKKDSKIVWIILGILSGFLP
CCCCCCCEEEEECCHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCEEHHHHHHHHHCCH
PLQTAINGKLRVATGSLLGATFISFFVGAIILLILILITQRRLEFPLYDTQKNRIPIWTY
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
MGGIFGIFILTGNIVLLPVLGSVLTTMIFILGQMIMALTIDQLGMFNLQKRKIDGRRIAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH
LVLTVIGIMFVKFL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA