| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757157
Identifier: 170757157
GI number: 170757157
Start: 3670079
End: 3671023
Strand: Reverse
Name: 170757157
Synonym: CLD_1143
Alternate gene names: NA
Gene position: 3671023-3670079 (Counterclockwise)
Preceding gene: 170756920
Following gene: 170757518
Centisome position: 92.74
GC content: 32.91
Gene sequence:
>945_bases ATGCAAATTATACTTTATTTAATTATGGGGATAATTATCGGAATGTTTTTCCCTATTCAGGCATCTATAAGTGCTCGGTT AAGCTCTTACTCAAAAACACCATTAATAGCTTCGTTCATCGCATTTTCTTTAGGGTCGGTTATACTATTCATTATAAATT TAATAGTAGATCCTGCAGGAATCAGTGTTGGGATTGATTTTTCATATCCATTGTATGTTTTTATCGGTGGAGCAATAACT GGCGTTGGATTTAATGTGGCTAATATCATTCTTTTTTCAAAACTTGGCGCTTCAGTTACAACAATAATAACTGTAACTGG GCAAATGGTTGTAGGAATTCTAATTGATCACTTTGGGTGGTTTGGTGTACCAGCTAATCCTATTAGTATTACTAGAACAA CTGGGACTATCATTATGATTTTAGCTGTTTCATTGGTTCAACCTAAAAAGAAAAGAGATTTAACTACGGACTTAGAAGAA GAGAAAAAGGATAGTAAAATTGTTTGGATAATTTTAGGAATTTTATCTGGGTTTTTACCACCATTACAAACCGCTATTAA TGGAAAACTTCGTGTTGCAACAGGTTCACTTTTAGGAGCTACTTTTATTTCTTTCTTCGTTGGCGCCATTATCTTGCTTA TTTTGATATTGATTACTCAGCGTCGCTTAGAGTTTCCTTTGTATGACACTCAAAAAAATCGCATTCCTATTTGGACATAC ATGGGAGGTATATTTGGCATATTTATTCTAACAGGTAACATTGTCTTATTACCTGTACTTGGATCGGTTTTAACTACTAT GATTTTTATATTGGGACAAATGATTATGGCATTAACAATCGATCAGCTTGGAATGTTTAATTTACAAAAAAGAAAAATTG ATGGTAGAAGAATTGCTGCTCTAGTATTGACGGTTATTGGTATAATGTTTGTTAAGTTCTTGTAA
Upstream 100 bases:
>100_bases ACTGTGATCGGTGGAGTTAAAAGACCGACTCTTGATTGTTATTTTAGAAAATAATTTTAATCCTAGTCATTAGAATCAAA AAGTAAACGGAGGTAAATTT
Downstream 100 bases:
>100_bases TCTTCTATGTAATCTACTCATGGATAATTTAAATTTTATACTGAATACAGCATGATTTCTCCTGCTGCTAGTGGTGACAG CTGGAAGAGTTGGGGCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Orotate Transporter; Glycyl-TRNA Synthetase Beta Subunit
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MQIILYLIMGIIIGMFFPIQASISARLSSYSKTPLIASFIAFSLGSVILFIINLIVDPAGISVGIDFSYPLYVFIGGAIT GVGFNVANIILFSKLGASVTTIITVTGQMVVGILIDHFGWFGVPANPISITRTTGTIIMILAVSLVQPKKKRDLTTDLEE EKKDSKIVWIILGILSGFLPPLQTAINGKLRVATGSLLGATFISFFVGAIILLILILITQRRLEFPLYDTQKNRIPIWTY MGGIFGIFILTGNIVLLPVLGSVLTTMIFILGQMIMALTIDQLGMFNLQKRKIDGRRIAALVLTVIGIMFVKFL
Sequences:
>Translated_314_residues MQIILYLIMGIIIGMFFPIQASISARLSSYSKTPLIASFIAFSLGSVILFIINLIVDPAGISVGIDFSYPLYVFIGGAIT GVGFNVANIILFSKLGASVTTIITVTGQMVVGILIDHFGWFGVPANPISITRTTGTIIMILAVSLVQPKKKRDLTTDLEE EKKDSKIVWIILGILSGFLPPLQTAINGKLRVATGSLLGATFISFFVGAIILLILILITQRRLEFPLYDTQKNRIPIWTY MGGIFGIFILTGNIVLLPVLGSVLTTMIFILGQMIMALTIDQLGMFNLQKRKIDGRRIAALVLTVIGIMFVKFL >Mature_314_residues MQIILYLIMGIIIGMFFPIQASISARLSSYSKTPLIASFIAFSLGSVILFIINLIVDPAGISVGIDFSYPLYVFIGGAIT GVGFNVANIILFSKLGASVTTIITVTGQMVVGILIDHFGWFGVPANPISITRTTGTIIMILAVSLVQPKKKRDLTTDLEE EKKDSKIVWIILGILSGFLPPLQTAINGKLRVATGSLLGATFISFFVGAIILLILILITQRRLEFPLYDTQKNRIPIWTY MGGIFGIFILTGNIVLLPVLGSVLTTMIFILGQMIMALTIDQLGMFNLQKRKIDGRRIAALVLTVIGIMFVKFL
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34232; Mature: 34232
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIILYLIMGIIIGMFFPIQASISARLSSYSKTPLIASFIAFSLGSVILFIINLIVDPAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ISVGIDFSYPLYVFIGGAITGVGFNVANIILFSKLGASVTTIITVTGQMVVGILIDHFGW CEEEECCCCCCCEEECCHHHHCCHHHHHHHHHHHHCCCHHHHEEEHHHHHHHHHHHHCCC FGVPANPISITRTTGTIIMILAVSLVQPKKKRDLTTDLEEEKKDSKIVWIILGILSGFLP CCCCCCCEEEEECCHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCEEHHHHHHHHHCCH PLQTAINGKLRVATGSLLGATFISFFVGAIILLILILITQRRLEFPLYDTQKNRIPIWTY HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH MGGIFGIFILTGNIVLLPVLGSVLTTMIFILGQMIMALTIDQLGMFNLQKRKIDGRRIAA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH LVLTVIGIMFVKFL HHHHHHHHHHHHCC >Mature Secondary Structure MQIILYLIMGIIIGMFFPIQASISARLSSYSKTPLIASFIAFSLGSVILFIINLIVDPAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC ISVGIDFSYPLYVFIGGAITGVGFNVANIILFSKLGASVTTIITVTGQMVVGILIDHFGW CEEEECCCCCCCEEECCHHHHCCHHHHHHHHHHHHCCCHHHHEEEHHHHHHHHHHHHCCC FGVPANPISITRTTGTIIMILAVSLVQPKKKRDLTTDLEEEKKDSKIVWIILGILSGFLP CCCCCCCEEEEECCHHHHHHHHHHHHCCHHHCCCCCCHHHHCCCCCEEHHHHHHHHHCCH PLQTAINGKLRVATGSLLGATFISFFVGAIILLILILITQRRLEFPLYDTQKNRIPIWTY HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH MGGIFGIFILTGNIVLLPVLGSVLTTMIFILGQMIMALTIDQLGMFNLQKRKIDGRRIAA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHH LVLTVIGIMFVKFL HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA