| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is feoB
Identifier: 170756979
GI number: 170756979
Start: 1202309
End: 1204072
Strand: Reverse
Name: feoB
Synonym: CLD_3482
Alternate gene names: 170756979
Gene position: 1204072-1202309 (Counterclockwise)
Preceding gene: 170756219
Following gene: 170754807
Centisome position: 30.42
GC content: 29.37
Gene sequence:
>1764_bases ATGATAACAACCGCATTACTTGGTAATCCTAATGTAGGTAAAACCTCTCTTTTTAATCAACTTACCGGATCCAATCAATA TGTTGGAAACTGGGCAGGTGTAACAGTAGAAAAAAAGGAAGGTTTTGTTAATGATTCTATTAAAATTGTGGATTTACCTG GCATATATGCCATGGATACCTTTTCTAATGAGGAAAAAGTATCTAAAAATTTTCTCATCAATGGAAATGTTGATGTAATA ATTGATATTGTAGATGCTTCAAATTTAGATAGAAATTTATATTTAACTACCCAATTAAAGCAATTTAATAAACCTATTAT TTTAGTGCTTAACATGATAGATGTAGCCGAAAATAAAGGCATAAAAATAAATTGTGATATTTTATCTAAAGAACTTAATG TTAAAGTTATACCTATAATAGCTTCAAAGGGTATAGGTATGGATAAACTAATAGAAACTTTAGAAAATAAAACTTTTTTA AGTTACAAAGATGACAATGATTATAATTTTGAAAGTGAAAGAGATGCTTATAAATTCATTGGTAATATCATTGAAAAAGC AGTTACTTTAGAAGAAAAAAAGACTATTTCTAATACGGATAAAATTGATAAAATAGTTCTTAATCCAGTACTTGCCTATC CCTTATTTTTAGGAATATTATATATTATATTTAAATTCACCTTTAACTGGGTAGGTACACCTTTAGCAGACTATATAGAC ACCTTATTAAATGATAATTTAATACCTTACCTAGGTACTTTATTAGAAAGTACAGCTCCTTGGTTTAAATCTTTATTATT AGATGGTATAGTAGCTGGAGTTGGCTCTGTAATAGTATTTCTACCTGTAATACTCACTTTGTTTTTGGGTATATCCTTCT TAGAAGATAGTGGATATATGGCAAGAGCAGCCTTTATAATGGACAAGTTAATGAGAAAAATGGGACTTTCCGGTAAAGCC TTTATACCTATGGTAGTTGGTTTTGGTTGTTCTGTTCCTGGAATAATGTCTGCTAGGACTTTAGAAAGTGAAAGAGATAG AAAGCTTACCGCATTATTAGTTCCTTTAATGTCCTGTAATGCTAGATTACCAGTTTATGCTCTATTTGCTTCTGTATTTT TCTCGGGACATGAAACTTCTATAGTTTTTTCTTTATATATTTTGGGAATACTATTAGCGTTTATAATAGGACTTCTATTT AAAAATACTTTGTTTAAAAAAGATGAAGAACCTTTTATAATAGAACTGCCTGAATATAAAATGCCTGAATTTAAAAATTT AATGCTTCATACTTGGGATAAGGGTAAAGGATTTTTGAAGAAAGCTGGAACGATAATATTCTCAATTTCAGTTATTGTTT GGTTGCTTTCTAATTTTAATTTTTCTGGAATGGTGGACATAAATGAAAGCTTCTTAGCTTCACTAGGTAGAGTATTATCA CCTATTTTTAAACCATTAGGTTTTTCAGGATGGCAGACTTCCGTATCCTTGTTAACAGGTCTTATGGCTAAAGAAGTTAT TGTTGGAACTATGGGCGTTATATATGGTGGAGATTTAAAAGTTACTCTTTTAAATCATTTTACTCCATTATCTGCTTATT CTTTTTTGGTTTTTGTTTTATTATATACTCCTTGTGTATCTGTAGTAGCTACTATGAGAAAAGAATATGGATCTAAAATG GCTTTGTTCTCTATTACTTATCAGATTATACTAGCATGGACTATATCTTTCTTAATATACAACGTAGGTGCTTTAATCAT ATAA
Upstream 100 bases:
>100_bases TAGGAGACCCCATACTAATAAATTTAAGAGGATTTGATTTAGCTATAAGAAAAAAAGATGCTAAATTTATATCTGTAGAT AAATAGACTGGAGGACAAAT
Downstream 100 bases:
>100_bases TTTAAAAAGAAGGTGATTAAATACCATGGAAATAATCATAGCTACAGTTATAATACTTTTAGCCATATATATATTAGCTA AAAATATAAAAAAGAAAACC
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MITTALLGNPNVGKTSLFNQLTGSNQYVGNWAGVTVEKKEGFVNDSIKIVDLPGIYAMDTFSNEEKVSKNFLINGNVDVI IDIVDASNLDRNLYLTTQLKQFNKPIILVLNMIDVAENKGIKINCDILSKELNVKVIPIIASKGIGMDKLIETLENKTFL SYKDDNDYNFESERDAYKFIGNIIEKAVTLEEKKTISNTDKIDKIVLNPVLAYPLFLGILYIIFKFTFNWVGTPLADYID TLLNDNLIPYLGTLLESTAPWFKSLLLDGIVAGVGSVIVFLPVILTLFLGISFLEDSGYMARAAFIMDKLMRKMGLSGKA FIPMVVGFGCSVPGIMSARTLESERDRKLTALLVPLMSCNARLPVYALFASVFFSGHETSIVFSLYILGILLAFIIGLLF KNTLFKKDEEPFIIELPEYKMPEFKNLMLHTWDKGKGFLKKAGTIIFSISVIVWLLSNFNFSGMVDINESFLASLGRVLS PIFKPLGFSGWQTSVSLLTGLMAKEVIVGTMGVIYGGDLKVTLLNHFTPLSAYSFLVFVLLYTPCVSVVATMRKEYGSKM ALFSITYQIILAWTISFLIYNVGALII
Sequences:
>Translated_587_residues MITTALLGNPNVGKTSLFNQLTGSNQYVGNWAGVTVEKKEGFVNDSIKIVDLPGIYAMDTFSNEEKVSKNFLINGNVDVI IDIVDASNLDRNLYLTTQLKQFNKPIILVLNMIDVAENKGIKINCDILSKELNVKVIPIIASKGIGMDKLIETLENKTFL SYKDDNDYNFESERDAYKFIGNIIEKAVTLEEKKTISNTDKIDKIVLNPVLAYPLFLGILYIIFKFTFNWVGTPLADYID TLLNDNLIPYLGTLLESTAPWFKSLLLDGIVAGVGSVIVFLPVILTLFLGISFLEDSGYMARAAFIMDKLMRKMGLSGKA FIPMVVGFGCSVPGIMSARTLESERDRKLTALLVPLMSCNARLPVYALFASVFFSGHETSIVFSLYILGILLAFIIGLLF KNTLFKKDEEPFIIELPEYKMPEFKNLMLHTWDKGKGFLKKAGTIIFSISVIVWLLSNFNFSGMVDINESFLASLGRVLS PIFKPLGFSGWQTSVSLLTGLMAKEVIVGTMGVIYGGDLKVTLLNHFTPLSAYSFLVFVLLYTPCVSVVATMRKEYGSKM ALFSITYQIILAWTISFLIYNVGALII >Mature_587_residues MITTALLGNPNVGKTSLFNQLTGSNQYVGNWAGVTVEKKEGFVNDSIKIVDLPGIYAMDTFSNEEKVSKNFLINGNVDVI IDIVDASNLDRNLYLTTQLKQFNKPIILVLNMIDVAENKGIKINCDILSKELNVKVIPIIASKGIGMDKLIETLENKTFL SYKDDNDYNFESERDAYKFIGNIIEKAVTLEEKKTISNTDKIDKIVLNPVLAYPLFLGILYIIFKFTFNWVGTPLADYID TLLNDNLIPYLGTLLESTAPWFKSLLLDGIVAGVGSVIVFLPVILTLFLGISFLEDSGYMARAAFIMDKLMRKMGLSGKA FIPMVVGFGCSVPGIMSARTLESERDRKLTALLVPLMSCNARLPVYALFASVFFSGHETSIVFSLYILGILLAFIIGLLF KNTLFKKDEEPFIIELPEYKMPEFKNLMLHTWDKGKGFLKKAGTIIFSISVIVWLLSNFNFSGMVDINESFLASLGRVLS PIFKPLGFSGWQTSVSLLTGLMAKEVIVGTMGVIYGGDLKVTLLNHFTPLSAYSFLVFVLLYTPCVSVVATMRKEYGSKM ALFSITYQIILAWTISFLIYNVGALII
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=593, Percent_Identity=38.1112984822934, Blast_Score=377, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 65256; Mature: 65256
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITTALLGNPNVGKTSLFNQLTGSNQYVGNWAGVTVEKKEGFVNDSIKIVDLPGIYAMDT CEEEEECCCCCCCHHHHHHHHCCCCCCCCCEECEEEECCCCCCCCCEEEEECCCEEEECC FSNEEKVSKNFLINGNVDVIIDIVDASNLDRNLYLTTQLKQFNKPIILVLNMIDVAENKG CCCHHHHCCCEEEECCCEEEEEEECCCCCCCEEEEEEEHHHHCCCEEEEEEHHHHHCCCC IKINCDILSKELNVKVIPIIASKGIGMDKLIETLENKTFLSYKDDNDYNFESERDAYKFI CEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHH GNIIEKAVTLEEKKTISNTDKIDKIVLNPVLAYPLFLGILYIIFKFTFNWVGTPLADYID HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH TLLNDNLIPYLGTLLESTAPWFKSLLLDGIVAGVGSVIVFLPVILTLFLGISFLEDSGYM HHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ARAAFIMDKLMRKMGLSGKAFIPMVVGFGCSVPGIMSARTLESERDRKLTALLVPLMSCN HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC ARLPVYALFASVFFSGHETSIVFSLYILGILLAFIIGLLFKNTLFKKDEEPFIIELPEYK CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC MPEFKNLMLHTWDKGKGFLKKAGTIIFSISVIVWLLSNFNFSGMVDINESFLASLGRVLS CCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHH PIFKPLGFSGWQTSVSLLTGLMAKEVIVGTMGVIYGGDLKVTLLNHFTPLSAYSFLVFVL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHH LYTPCVSVVATMRKEYGSKMALFSITYQIILAWTISFLIYNVGALII HHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MITTALLGNPNVGKTSLFNQLTGSNQYVGNWAGVTVEKKEGFVNDSIKIVDLPGIYAMDT CEEEEECCCCCCCHHHHHHHHCCCCCCCCCEECEEEECCCCCCCCCEEEEECCCEEEECC FSNEEKVSKNFLINGNVDVIIDIVDASNLDRNLYLTTQLKQFNKPIILVLNMIDVAENKG CCCHHHHCCCEEEECCCEEEEEEECCCCCCCEEEEEEEHHHHCCCEEEEEEHHHHHCCCC IKINCDILSKELNVKVIPIIASKGIGMDKLIETLENKTFLSYKDDNDYNFESERDAYKFI CEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHH GNIIEKAVTLEEKKTISNTDKIDKIVLNPVLAYPLFLGILYIIFKFTFNWVGTPLADYID HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH TLLNDNLIPYLGTLLESTAPWFKSLLLDGIVAGVGSVIVFLPVILTLFLGISFLEDSGYM HHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ARAAFIMDKLMRKMGLSGKAFIPMVVGFGCSVPGIMSARTLESERDRKLTALLVPLMSCN HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC ARLPVYALFASVFFSGHETSIVFSLYILGILLAFIIGLLFKNTLFKKDEEPFIIELPEYK CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC MPEFKNLMLHTWDKGKGFLKKAGTIIFSISVIVWLLSNFNFSGMVDINESFLASLGRVLS CCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHH PIFKPLGFSGWQTSVSLLTGLMAKEVIVGTMGVIYGGDLKVTLLNHFTPLSAYSFLVFVL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCHHHHHHHHHHHH LYTPCVSVVATMRKEYGSKMALFSITYQIILAWTISFLIYNVGALII HHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA