Click here to switch to the map view.

The map label for this gene is yyaP [H]

Identifier: 170756464

GI number: 170756464

Start: 3668850

End: 3669371

Strand: Reverse

Name: yyaP [H]

Synonym: CLD_1145

Alternate gene names: 170756464

Gene position: 3669371-3668850 (Counterclockwise)

Preceding gene: 170757518

Following gene: 170755660

Centisome position: 92.7

GC content: 38.12

Gene sequence:

>522_bases
ATGAGTGGAAAAATTATTATGAACTTAGCCATCAGCATTGACGGATATATTGCTGATGAAAGTGGGGGCTTTGACTGGAT
TGTGGGGCAAGGCGATACCGCTATTGATACAGCCGAAAGAAGTGAGTTTGAAGAGTTTCTTGCGGGTATTGATATTGTTG
TTATGGGCAAAAACTGCTATGATCAGGGTTTTGCTAAAGAGTATCCAACAAAAATGGTTTATGTAGCTACAAGTGAAGAG
AAAGAAGATGAGGGTAATATCCGTTTTATCTGTGGCGATATTGTCAGCATATTTGAAAAAGAAAAGAACAGTGGTAAAAA
TATATTTCTGTTTGGTGGCGGCGGTCTGATAGATCACTTTGTCAAGGCCAATGTTATTGACGAATATATTGTGAGAATTA
TTCCAATGATACTCGGCAAAGGTCGTCCACTGTTCTTAGGAAATAACCCGACAATACAGCTTCATCTTGATAAATACACC
GTTAGCGATGGAATTGCTGTGTTTTATTACTCAAAACGATAA

Upstream 100 bases:

>100_bases
GGGACATAGTTGTTGCATAGGGAACGCAGCAGCAGATTGCTGAAAACAAAAACAGTTTAACTGAAAAATATTTTAAGGAA
TTTATAAAGGAGAAGATACA

Downstream 100 bases:

>100_bases
AATAGCAATTTTCATTAAGACAAACATACAAGATTTGATTATAATGAAATGTAAACAATGAAAGGAGTGCGTGATATGGA
TATGAAAGACCTCATATTAG

Product: riboflavin biosynthesis protein RibD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSGKIIMNLAISIDGYIADESGGFDWIVGQGDTAIDTAERSEFEEFLAGIDIVVMGKNCYDQGFAKEYPTKMVYVATSEE
KEDEGNIRFICGDIVSIFEKEKNSGKNIFLFGGGGLIDHFVKANVIDEYIVRIIPMILGKGRPLFLGNNPTIQLHLDKYT
VSDGIAVFYYSKR

Sequences:

>Translated_173_residues
MSGKIIMNLAISIDGYIADESGGFDWIVGQGDTAIDTAERSEFEEFLAGIDIVVMGKNCYDQGFAKEYPTKMVYVATSEE
KEDEGNIRFICGDIVSIFEKEKNSGKNIFLFGGGGLIDHFVKANVIDEYIVRIIPMILGKGRPLFLGNNPTIQLHLDKYT
VSDGIAVFYYSKR
>Mature_172_residues
SGKIIMNLAISIDGYIADESGGFDWIVGQGDTAIDTAERSEFEEFLAGIDIVVMGKNCYDQGFAKEYPTKMVYVATSEEK
EDEGNIRFICGDIVSIFEKEKNSGKNIFLFGGGGLIDHFVKANVIDEYIVRIIPMILGKGRPLFLGNNPTIQLHLDKYTV
SDGIAVFYYSKR

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywjB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 19214; Mature: 19083

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKIIMNLAISIDGYIADESGGFDWIVGQGDTAIDTAERSEFEEFLAGIDIVVMGKNCY
CCCEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCC
DQGFAKEYPTKMVYVATSEEKEDEGNIRFICGDIVSIFEKEKNSGKNIFLFGGGGLIDHF
CCCCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEECCHHHHHH
VKANVIDEYIVRIIPMILGKGRPLFLGNNPTIQLHLDKYTVSDGIAVFYYSKR
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEEEECCCEEEEEEECC
>Mature Secondary Structure 
SGKIIMNLAISIDGYIADESGGFDWIVGQGDTAIDTAERSEFEEFLAGIDIVVMGKNCY
CCEEEEEEEEEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCC
DQGFAKEYPTKMVYVATSEEKEDEGNIRFICGDIVSIFEKEKNSGKNIFLFGGGGLIDHF
CCCCCCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEEEECCHHHHHH
VKANVIDEYIVRIIPMILGKGRPLFLGNNPTIQLHLDKYTVSDGIAVFYYSKR
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]