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The map label for this gene is yicL [H]

Identifier: 170756424

GI number: 170756424

Start: 1483225

End: 1484199

Strand: Reverse

Name: yicL [H]

Synonym: CLD_3219

Alternate gene names: 170756424

Gene position: 1484199-1483225 (Counterclockwise)

Preceding gene: 170757307

Following gene: 170755505

Centisome position: 37.5

GC content: 26.87

Gene sequence:

>975_bases
ATGTTAAAAAATGTAAACAACAAAAAATTAGGACTTATATTAGTGCTTTTAGCAGCTATGTTTTGGGGATACGTAGGAGT
TCCTACTAAACATTTAGCTGATTTAGGTTTTGATAACTATACTATTTCTTTTTTTAAAACAAGTATACCTGCAATATTTT
ATTTCATATATTCCTTTAAAAAAGATCCTTCTTTGTTTAAAGTAGATAAAAAAGGTATTTTATTTTTTATAATTTATGGC
ATAGTGGTTATAGCAGGATGCTTTATAGCCTTTAATATAACCATAAATTTACTGCCCCTAGCTTTAGCAACTATGTTTTT
ATACACTTCTCAAATTTGGGTAGTAACTATTTCTTACTTTATGTTTAAAGAAAAGTTTACAACACAAAAAGCAATATCTA
TGCTATTAATTTTAATAGGTTGCTTTATGATGTGTGAAATGCACAAATTAGGAAGTTTTAATCTAAGTAGCAAGGGTATA
TTTTGGGGGCTTATATCTGGATTTACCTTTGCACTACAAATACTTTTAGCTAAAGTAAGTAATGAAAAATATCACTATAA
TCATAATTCTTTATTAACTTACTCCTTTTTATTTGCAGCTATATTTTTATTCCCTTTTATGGATATGAAAAACAACATTC
ATATTTTCCAAAGCTCTAATAATCTATTTTTCCTATTTAAAAACATATTCTGGAGTGTTATAGGTACCCTTATTGCAAAC
ACCGCCTATGTAAAATCTGTAGAATATATAGAAGCTAGCATTGCTAGTATGGTATCCTCTTTGGAACTAGTTATAGCTTC
TGTTTTAGGTTTTATAGTATTTAATCAATCTTTAAATTTAGTTCAAATATTAGGAATGGCTTTAATTCTTGTGTCTATAA
TTTTATTAGAAATGAAAAAATCAGTTTTGTTAAAATTATTTAAGAGACCTCATAAAAAGTTAGAAGTCGCCTCTGAAACC
ACCTATGAAAACTAA

Upstream 100 bases:

>100_bases
AGTTCAAATTTTAGATATAGCTTTAATCCTTATTTCTATATGGCTATTGCAAACAAAAGGTAAAAGACAAAAATATCTTC
ATAAATTGTGGAGGGATAAA

Downstream 100 bases:

>100_bases
GATTAAATAAAGTTATAAATTTATAACTCTTAGTAACACAAAAATAAGGTATCTCAAAATAGATTTAATTTTATTTTGAG
ATATCTCTTTCTATATAATA

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MLKNVNNKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFKKDPSLFKVDKKGILFFIIYG
IVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYFMFKEKFTTQKAISMLLILIGCFMMCEMHKLGSFNLSSKGI
FWGLISGFTFALQILLAKVSNEKYHYNHNSLLTYSFLFAAIFLFPFMDMKNNIHIFQSSNNLFFLFKNIFWSVIGTLIAN
TAYVKSVEYIEASIASMVSSLELVIASVLGFIVFNQSLNLVQILGMALILVSIILLEMKKSVLLKLFKRPHKKLEVASET
TYEN

Sequences:

>Translated_324_residues
MLKNVNNKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFKKDPSLFKVDKKGILFFIIYG
IVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYFMFKEKFTTQKAISMLLILIGCFMMCEMHKLGSFNLSSKGI
FWGLISGFTFALQILLAKVSNEKYHYNHNSLLTYSFLFAAIFLFPFMDMKNNIHIFQSSNNLFFLFKNIFWSVIGTLIAN
TAYVKSVEYIEASIASMVSSLELVIASVLGFIVFNQSLNLVQILGMALILVSIILLEMKKSVLLKLFKRPHKKLEVASET
TYEN
>Mature_324_residues
MLKNVNNKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFKKDPSLFKVDKKGILFFIIYG
IVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYFMFKEKFTTQKAISMLLILIGCFMMCEMHKLGSFNLSSKGI
FWGLISGFTFALQILLAKVSNEKYHYNHNSLLTYSFLFAAIFLFPFMDMKNNIHIFQSSNNLFFLFKNIFWSVIGTLIAN
TAYVKSVEYIEASIASMVSSLELVIASVLGFIVFNQSLNLVQILGMALILVSIILLEMKKSVLLKLFKRPHKKLEVASET
TYEN

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 36881; Mature: 36881

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNVNNKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFK
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHC
KDPSLFKVDKKGILFFIIYGIVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYF
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFKEKFTTQKAISMLLILIGCFMMCEMHKLGSFNLSSKGIFWGLISGFTFALQILLAKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
NEKYHYNHNSLLTYSFLFAAIFLFPFMDMKNNIHIFQSSNNLFFLFKNIFWSVIGTLIAN
CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHH
TAYVKSVEYIEASIASMVSSLELVIASVLGFIVFNQSLNLVQILGMALILVSIILLEMKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SVLLKLFKRPHKKLEVASETTYEN
HHHHHHHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MLKNVNNKKLGLILVLLAAMFWGYVGVPTKHLADLGFDNYTISFFKTSIPAIFYFIYSFK
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHC
KDPSLFKVDKKGILFFIIYGIVVIAGCFIAFNITINLLPLALATMFLYTSQIWVVTISYF
CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFKEKFTTQKAISMLLILIGCFMMCEMHKLGSFNLSSKGIFWGLISGFTFALQILLAKVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
NEKYHYNHNSLLTYSFLFAAIFLFPFMDMKNNIHIFQSSNNLFFLFKNIFWSVIGTLIAN
CCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHH
TAYVKSVEYIEASIASMVSSLELVIASVLGFIVFNQSLNLVQILGMALILVSIILLEMKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SVLLKLFKRPHKKLEVASETTYEN
HHHHHHHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677609; 9311997 [H]