Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170756237

Identifier: 170756237

GI number: 170756237

Start: 331018

End: 331488

Strand: Direct

Name: 170756237

Synonym: CLD_0497

Alternate gene names: NA

Gene position: 331018-331488 (Clockwise)

Preceding gene: 170756562

Following gene: 170757104

Centisome position: 8.36

GC content: 27.39

Gene sequence:

>471_bases
ATGAGGGTAAAAATCCTAATAATATTAGGAGCAAGTATACTAATTTTAACTGCAGTAGGCTTTTACATGTTCAACAATGA
ATCTAAAGCCCTACAAGATAATAAAGCAGAGAATATTAAAAAATTTGATGAGGTATATAGTAGTGAAATAAATAAGAGTT
ATGACGGAACTTACTTAGATAAAACAGTAACGATGGTTGACGCTAAAGAAGAATTTAATATAAGAATCAATGATATTAAT
AAGGATAGTAAGATAATACTTATTAATTCGTCAAATGGAGAAAAGCAGGATATGACTTATACGGAAAATAATCAATTTGT
TTTAACTACTAAACTTGATGGAGGTGTAAATTATGGTATTCTTATGGACAATAAATTAATTGGTGGCATAAGAGTTGTAA
ATGAGTTAGATAAAGCGGATAAAGAAAAAATATATGAAGAAGTAATAAAAAGTTTACAATGCGGTATTTAG

Upstream 100 bases:

>100_bases
TTCATTATAGAAATTAAAATAATGAATAAGCTAAATCTTCATAATATCAACAAGTAATTTAGGTATTATTATTTTATTAT
CAAGCAAGAGGAGTGATACT

Downstream 100 bases:

>100_bases
GAGGAAAACTATGAACTATATATTACTATTTTTAGAAGGGATAATAACTTTTATATCTCCTTGTATATTGCCAATGATTC
CAATATACGTTTCATATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRVKILIILGASILILTAVGFYMFNNESKALQDNKAENIKKFDEVYSSEINKSYDGTYLDKTVTMVDAKEEFNIRINDIN
KDSKIILINSSNGEKQDMTYTENNQFVLTTKLDGGVNYGILMDNKLIGGIRVVNELDKADKEKIYEEVIKSLQCGI

Sequences:

>Translated_156_residues
MRVKILIILGASILILTAVGFYMFNNESKALQDNKAENIKKFDEVYSSEINKSYDGTYLDKTVTMVDAKEEFNIRINDIN
KDSKIILINSSNGEKQDMTYTENNQFVLTTKLDGGVNYGILMDNKLIGGIRVVNELDKADKEKIYEEVIKSLQCGI
>Mature_156_residues
MRVKILIILGASILILTAVGFYMFNNESKALQDNKAENIKKFDEVYSSEINKSYDGTYLDKTVTMVDAKEEFNIRINDIN
KDSKIILINSSNGEKQDMTYTENNQFVLTTKLDGGVNYGILMDNKLIGGIRVVNELDKADKEKIYEEVIKSLQCGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17659; Mature: 17659

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKILIILGASILILTAVGFYMFNNESKALQDNKAENIKKFDEVYSSEINKSYDGTYLD
CEEEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC
KTVTMVDAKEEFNIRINDINKDSKIILINSSNGEKQDMTYTENNQFVLTTKLDGGVNYGI
EEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCEEEEEEECCCCEEEE
LMDNKLIGGIRVVNELDKADKEKIYEEVIKSLQCGI
EECCCEECHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVKILIILGASILILTAVGFYMFNNESKALQDNKAENIKKFDEVYSSEINKSYDGTYLD
CEEEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC
KTVTMVDAKEEFNIRINDINKDSKIILINSSNGEKQDMTYTENNQFVLTTKLDGGVNYGI
EEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCEEEEEEECCCCEEEE
LMDNKLIGGIRVVNELDKADKEKIYEEVIKSLQCGI
EECCCEECHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA