Definition | Clostridium botulinum B1 str. Okra, complete genome. |
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Accession | NC_010516 |
Length | 3,958,233 |
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The map label for this gene is 170756237
Identifier: 170756237
GI number: 170756237
Start: 331018
End: 331488
Strand: Direct
Name: 170756237
Synonym: CLD_0497
Alternate gene names: NA
Gene position: 331018-331488 (Clockwise)
Preceding gene: 170756562
Following gene: 170757104
Centisome position: 8.36
GC content: 27.39
Gene sequence:
>471_bases ATGAGGGTAAAAATCCTAATAATATTAGGAGCAAGTATACTAATTTTAACTGCAGTAGGCTTTTACATGTTCAACAATGA ATCTAAAGCCCTACAAGATAATAAAGCAGAGAATATTAAAAAATTTGATGAGGTATATAGTAGTGAAATAAATAAGAGTT ATGACGGAACTTACTTAGATAAAACAGTAACGATGGTTGACGCTAAAGAAGAATTTAATATAAGAATCAATGATATTAAT AAGGATAGTAAGATAATACTTATTAATTCGTCAAATGGAGAAAAGCAGGATATGACTTATACGGAAAATAATCAATTTGT TTTAACTACTAAACTTGATGGAGGTGTAAATTATGGTATTCTTATGGACAATAAATTAATTGGTGGCATAAGAGTTGTAA ATGAGTTAGATAAAGCGGATAAAGAAAAAATATATGAAGAAGTAATAAAAAGTTTACAATGCGGTATTTAG
Upstream 100 bases:
>100_bases TTCATTATAGAAATTAAAATAATGAATAAGCTAAATCTTCATAATATCAACAAGTAATTTAGGTATTATTATTTTATTAT CAAGCAAGAGGAGTGATACT
Downstream 100 bases:
>100_bases GAGGAAAACTATGAACTATATATTACTATTTTTAGAAGGGATAATAACTTTTATATCTCCTTGTATATTGCCAATGATTC CAATATACGTTTCATATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MRVKILIILGASILILTAVGFYMFNNESKALQDNKAENIKKFDEVYSSEINKSYDGTYLDKTVTMVDAKEEFNIRINDIN KDSKIILINSSNGEKQDMTYTENNQFVLTTKLDGGVNYGILMDNKLIGGIRVVNELDKADKEKIYEEVIKSLQCGI
Sequences:
>Translated_156_residues MRVKILIILGASILILTAVGFYMFNNESKALQDNKAENIKKFDEVYSSEINKSYDGTYLDKTVTMVDAKEEFNIRINDIN KDSKIILINSSNGEKQDMTYTENNQFVLTTKLDGGVNYGILMDNKLIGGIRVVNELDKADKEKIYEEVIKSLQCGI >Mature_156_residues MRVKILIILGASILILTAVGFYMFNNESKALQDNKAENIKKFDEVYSSEINKSYDGTYLDKTVTMVDAKEEFNIRINDIN KDSKIILINSSNGEKQDMTYTENNQFVLTTKLDGGVNYGILMDNKLIGGIRVVNELDKADKEKIYEEVIKSLQCGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17659; Mature: 17659
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVKILIILGASILILTAVGFYMFNNESKALQDNKAENIKKFDEVYSSEINKSYDGTYLD CEEEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC KTVTMVDAKEEFNIRINDINKDSKIILINSSNGEKQDMTYTENNQFVLTTKLDGGVNYGI EEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCEEEEEEECCCCEEEE LMDNKLIGGIRVVNELDKADKEKIYEEVIKSLQCGI EECCCEECHHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRVKILIILGASILILTAVGFYMFNNESKALQDNKAENIKKFDEVYSSEINKSYDGTYLD CEEEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC KTVTMVDAKEEFNIRINDINKDSKIILINSSNGEKQDMTYTENNQFVLTTKLDGGVNYGI EEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCEEEEEEECCCCEEEE LMDNKLIGGIRVVNELDKADKEKIYEEVIKSLQCGI EECCCEECHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA