Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170756222

Identifier: 170756222

GI number: 170756222

Start: 3542104

End: 3544107

Strand: Reverse

Name: 170756222

Synonym: CLD_1247

Alternate gene names: NA

Gene position: 3544107-3542104 (Counterclockwise)

Preceding gene: 170756161

Following gene: 170756547

Centisome position: 89.54

GC content: 26.05

Gene sequence:

>2004_bases
ATGGAAGAGCTAAATATTATTTTTGATAAGGAAAGTCCTCAGGAAAAAAATTCTAGCATAAGAATTAAAGCTTTTATAGA
AAACAATAAAAAAATTTTATATAAATTTATAATAGGCAAAGAAGGTACGTGGAATACTGTTAATGATTTTGGTTTTGATG
ATACTATAAACTGGATACCTGAAGAAGAGGGCGAATATATAATAATGGTACAAGCTAAAAGAGAAGATAGTACTAAACCC
TTTGATTTTATTAGCAAATTTGATTATGTAATAGGAGAAGCAGAGGAAAACTTTATAAGAAATGTCTATCTAAATAAAGA
TACTCTCAATATGGGAGAAAGAATAGAAGCAGTGGTGGAAAGCAATAAATTTCCATTAATGTTCAAATATTGGCTTAAGG
AAGATGATAATTGGAAGCTTATAAAGGATTATTCTACGGAAAATAGCATATCCCTTGTAGTAAAAAAACCAGGCATACAA
GAACTTATGGTTGAATGTAAAGATTTAAAATCTGTTAAAGATTATGATGATTCTTTCAAAGTAGCTTTTAAAGTTAATTC
TATAGACAATGTAGAAATAGTTGATTTTAATTGCTTAACTAAAGAATTAATATGTGATGAAGACTTAGTTTTTAAAGTAG
AATCAGTTTATGAAGAAGGTAGAGATATACTATATAAATTTATAAAAATAGATAGTAATGGGACACAACAATGTATACAG
GATTATTCTAGTAATAATGTAGTATCCTATATAGAAAAAGATAGCGGAGATTATAAATTGTTATGTTTAGTTAAGGATAT
GTATTCTCAAAATGAATTTGATGATAGAGCTATGTTAAAATTTACGGTTAAAGCTTATCGAGATATTGTTATAAGAAAAT
TTACAACTAACTTAAATTCACCTCAAATGACGGATACTGCTATAGAGTTGAAAATAAATGCAGAAGGCGGTAAGGAACTT
TTATATAAGTTTATAATAAAGGGTAAGCACATAGAGGATTCTGGATATATAAGAAATAATATATATACATGGACACCTTC
TATTCCAGGTAAATATTCTATAGAGGCCTGGGTAAAAGATTCTTCCAGTGAAAATGAATTTGATGATAAGTCTTCTATAG
AATATACAATAAATTTAGAATATATTAAGGAACCTATAAAAATTGAAAAAGTAATATTAGATAAAGGAAAACATGTTTTA
AAAGGAGAAGAAGTAGAAATAAGAGCTATAAGTAATGGAGGGAATAATGTAAGATATGCATTTTCTATAAAAAAAGATGG
AAAAGAAGAAGAAAAAATAGATTTTGGTACTTGTAATTGGGCTAAATTTATACCAAAAGAAACAGGTACATATGAATTAG
AGGTTTTAGCCAAACATAAATATTCATCTAGAGAATATGATTCTCATTATATAGCTTATATAAACAGTCATAATTATATA
CCAGCTATAATTGATTATGTTATATGTCCAGTAAAGACTAGTTATATAGTAGGAGATGAGATATTATTAAAGGTTATTAT
TCAAAATACAAAGGATAATTTAATAAAATATATTTTAAGAATAAATAATGAAAAAGTAGAAGAAACAGATTATATTGAAA
ATAAAGATTTTAAATATATACCTAAATGTAGTGGGGCTTATACTATAGAAGTATTAGCTAAAAATAAAGAAAGCGAAGAA
ATTTATGATTCTAAAAAAGAAGTTAAATTTTATGTAAGGGAAGCATTGCCTATAACAAACACAAAAATAAAAACTAGCAG
GACAGATATAAAATGTAATGAAACTGTAACTTTTAGCGTAGATAGTGAGGGAGGAAATGCAGTTCTTTATCAATTTTATA
TTATGAATAAAGGAGAATGGAAGTTAGTTCAAGATTATAGCAGAAAGAAATATTATACCTTTATGCCTTTTAATGAAGGG
GAATATGAAGTATTAGTTTTATCCAAAAGTAGCTTTTTAAAGTGTGCTTATGAAGATTATGACATATTTAAATTTAAAGT
GTAA

Upstream 100 bases:

>100_bases
AAGGTGATATAATAATATAAATAGAATAAAATACTATTACAAAATTTGGTATTATAGTATAATGTATTTGTTAATGTTTT
TAAGAGAGGATGATGTAATA

Downstream 100 bases:

>100_bases
ATAAAGCAGAAATCCAAACGATAATATTAGATATATGTTTAAAAATGGTGGTGGATTTATGAAAATAGATAATAATGAGA
TGAAATTACAACAAATGCTA

Product: triple tyrosine motif-containing protein

Products: NA

Alternate protein names: Triple Tyrosine Motif-Containing Protein; Two Component Regulator Three Y Motif Protein; Two Component Regulator Three Y Domain-Containing Protein; SpoIID-Like Domain-Containing Protein; SpoIID/LytB Domain-Containing Protein; SpoIID/LytB Domain Protein; Beta-N-Acetylglucosaminidase

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MEELNIIFDKESPQEKNSSIRIKAFIENNKKILYKFIIGKEGTWNTVNDFGFDDTINWIPEEEGEYIIMVQAKREDSTKP
FDFISKFDYVIGEAEENFIRNVYLNKDTLNMGERIEAVVESNKFPLMFKYWLKEDDNWKLIKDYSTENSISLVVKKPGIQ
ELMVECKDLKSVKDYDDSFKVAFKVNSIDNVEIVDFNCLTKELICDEDLVFKVESVYEEGRDILYKFIKIDSNGTQQCIQ
DYSSNNVVSYIEKDSGDYKLLCLVKDMYSQNEFDDRAMLKFTVKAYRDIVIRKFTTNLNSPQMTDTAIELKINAEGGKEL
LYKFIIKGKHIEDSGYIRNNIYTWTPSIPGKYSIEAWVKDSSSENEFDDKSSIEYTINLEYIKEPIKIEKVILDKGKHVL
KGEEVEIRAISNGGNNVRYAFSIKKDGKEEEKIDFGTCNWAKFIPKETGTYELEVLAKHKYSSREYDSHYIAYINSHNYI
PAIIDYVICPVKTSYIVGDEILLKVIIQNTKDNLIKYILRINNEKVEETDYIENKDFKYIPKCSGAYTIEVLAKNKESEE
IYDSKKEVKFYVREALPITNTKIKTSRTDIKCNETVTFSVDSEGGNAVLYQFYIMNKGEWKLVQDYSRKKYYTFMPFNEG
EYEVLVLSKSSFLKCAYEDYDIFKFKV

Sequences:

>Translated_667_residues
MEELNIIFDKESPQEKNSSIRIKAFIENNKKILYKFIIGKEGTWNTVNDFGFDDTINWIPEEEGEYIIMVQAKREDSTKP
FDFISKFDYVIGEAEENFIRNVYLNKDTLNMGERIEAVVESNKFPLMFKYWLKEDDNWKLIKDYSTENSISLVVKKPGIQ
ELMVECKDLKSVKDYDDSFKVAFKVNSIDNVEIVDFNCLTKELICDEDLVFKVESVYEEGRDILYKFIKIDSNGTQQCIQ
DYSSNNVVSYIEKDSGDYKLLCLVKDMYSQNEFDDRAMLKFTVKAYRDIVIRKFTTNLNSPQMTDTAIELKINAEGGKEL
LYKFIIKGKHIEDSGYIRNNIYTWTPSIPGKYSIEAWVKDSSSENEFDDKSSIEYTINLEYIKEPIKIEKVILDKGKHVL
KGEEVEIRAISNGGNNVRYAFSIKKDGKEEEKIDFGTCNWAKFIPKETGTYELEVLAKHKYSSREYDSHYIAYINSHNYI
PAIIDYVICPVKTSYIVGDEILLKVIIQNTKDNLIKYILRINNEKVEETDYIENKDFKYIPKCSGAYTIEVLAKNKESEE
IYDSKKEVKFYVREALPITNTKIKTSRTDIKCNETVTFSVDSEGGNAVLYQFYIMNKGEWKLVQDYSRKKYYTFMPFNEG
EYEVLVLSKSSFLKCAYEDYDIFKFKV
>Mature_667_residues
MEELNIIFDKESPQEKNSSIRIKAFIENNKKILYKFIIGKEGTWNTVNDFGFDDTINWIPEEEGEYIIMVQAKREDSTKP
FDFISKFDYVIGEAEENFIRNVYLNKDTLNMGERIEAVVESNKFPLMFKYWLKEDDNWKLIKDYSTENSISLVVKKPGIQ
ELMVECKDLKSVKDYDDSFKVAFKVNSIDNVEIVDFNCLTKELICDEDLVFKVESVYEEGRDILYKFIKIDSNGTQQCIQ
DYSSNNVVSYIEKDSGDYKLLCLVKDMYSQNEFDDRAMLKFTVKAYRDIVIRKFTTNLNSPQMTDTAIELKINAEGGKEL
LYKFIIKGKHIEDSGYIRNNIYTWTPSIPGKYSIEAWVKDSSSENEFDDKSSIEYTINLEYIKEPIKIEKVILDKGKHVL
KGEEVEIRAISNGGNNVRYAFSIKKDGKEEEKIDFGTCNWAKFIPKETGTYELEVLAKHKYSSREYDSHYIAYINSHNYI
PAIIDYVICPVKTSYIVGDEILLKVIIQNTKDNLIKYILRINNEKVEETDYIENKDFKYIPKCSGAYTIEVLAKNKESEE
IYDSKKEVKFYVREALPITNTKIKTSRTDIKCNETVTFSVDSEGGNAVLYQFYIMNKGEWKLVQDYSRKKYYTFMPFNEG
EYEVLVLSKSSFLKCAYEDYDIFKFKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77979; Mature: 77979

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEELNIIFDKESPQEKNSSIRIKAFIENNKKILYKFIIGKEGTWNTVNDFGFDDTINWIP
CCCEEEEECCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
EEEGEYIIMVQAKREDSTKPFDFISKFDYVIGEAEENFIRNVYLNKDTLNMGERIEAVVE
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHEEEEEECCCCCCHHHHHHHHHH
SNKFPLMFKYWLKEDDNWKLIKDYSTENSISLVVKKPGIQELMVECKDLKSVKDYDDSFK
CCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEE
VAFKVNSIDNVEIVDFNCLTKELICDEDLVFKVESVYEEGRDILYKFIKIDSNGTQQCIQ
EEEEECCCCCEEEEEECHHHHHHHCCCHHEEHHHHHHHCCHHEEEEEEEECCCCHHHHHH
DYSSNNVVSYIEKDSGDYKLLCLVKDMYSQNEFDDRAMLKFTVKAYRDIVIRKFTTNLNS
HCCCCCEEEEEECCCCCEEEEEEEEHHHCCCCCCCHHHHEEEHHHHHHHEEEEEECCCCC
PQMTDTAIELKINAEGGKELLYKFIIKGKHIEDSGYIRNNIYTWTPSIPGKYSIEAWVKD
CCCCCEEEEEEEECCCCHHHHHHHHHCCCEECCCCCEECCEEEECCCCCCCEEEEEEEEC
SSSENEFDDKSSIEYTINLEYIKEPIKIEKVILDKGKHVLKGEEVEIRAISNGGNNVRYA
CCCCCCCCCCCCEEEEEEEHHHCCCHHEEHHHHHCCCEEECCCEEEEEEEECCCCEEEEE
FSIKKDGKEEEKIDFGTCNWAKFIPKETGTYELEVLAKHKYSSREYDSHYIAYINSHNYI
EEECCCCCCCCCEECCCCCHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCH
PAIIDYVICPVKTSYIVGDEILLKVIIQNTKDNLIKYILRINNEKVEETDYIENKDFKYI
HHHHHHHCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEC
PKCSGAYTIEVLAKNKESEEIYDSKKEVKFYVREALPITNTKIKTSRTDIKCNETVTFSV
CCCCCCEEEEEEECCCCCHHHHCCHHHHHEEEHHCCCCCCCEEEECCCCEEECCEEEEEE
DSEGGNAVLYQFYIMNKGEWKLVQDYSRKKYYTFMPFNEGEYEVLVLSKSSFLKCAYEDY
ECCCCCEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCEEEEEEECCCEEEEEECCC
DIFKFKV
EEEEEEC
>Mature Secondary Structure
MEELNIIFDKESPQEKNSSIRIKAFIENNKKILYKFIIGKEGTWNTVNDFGFDDTINWIP
CCCEEEEECCCCCCCCCCCEEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
EEEGEYIIMVQAKREDSTKPFDFISKFDYVIGEAEENFIRNVYLNKDTLNMGERIEAVVE
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHEEEEEECCCCCCHHHHHHHHHH
SNKFPLMFKYWLKEDDNWKLIKDYSTENSISLVVKKPGIQELMVECKDLKSVKDYDDSFK
CCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEE
VAFKVNSIDNVEIVDFNCLTKELICDEDLVFKVESVYEEGRDILYKFIKIDSNGTQQCIQ
EEEEECCCCCEEEEEECHHHHHHHCCCHHEEHHHHHHHCCHHEEEEEEEECCCCHHHHHH
DYSSNNVVSYIEKDSGDYKLLCLVKDMYSQNEFDDRAMLKFTVKAYRDIVIRKFTTNLNS
HCCCCCEEEEEECCCCCEEEEEEEEHHHCCCCCCCHHHHEEEHHHHHHHEEEEEECCCCC
PQMTDTAIELKINAEGGKELLYKFIIKGKHIEDSGYIRNNIYTWTPSIPGKYSIEAWVKD
CCCCCEEEEEEEECCCCHHHHHHHHHCCCEECCCCCEECCEEEECCCCCCCEEEEEEEEC
SSSENEFDDKSSIEYTINLEYIKEPIKIEKVILDKGKHVLKGEEVEIRAISNGGNNVRYA
CCCCCCCCCCCCEEEEEEEHHHCCCHHEEHHHHHCCCEEECCCEEEEEEEECCCCEEEEE
FSIKKDGKEEEKIDFGTCNWAKFIPKETGTYELEVLAKHKYSSREYDSHYIAYINSHNYI
EEECCCCCCCCCEECCCCCHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEECCCCH
PAIIDYVICPVKTSYIVGDEILLKVIIQNTKDNLIKYILRINNEKVEETDYIENKDFKYI
HHHHHHHCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEC
PKCSGAYTIEVLAKNKESEEIYDSKKEVKFYVREALPITNTKIKTSRTDIKCNETVTFSV
CCCCCCEEEEEEECCCCCHHHHCCHHHHHEEEHHCCCCCCCEEEECCCCEEECCEEEEEE
DSEGGNAVLYQFYIMNKGEWKLVQDYSRKKYYTFMPFNEGEYEVLVLSKSSFLKCAYEDY
ECCCCCEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCEEEEEEECCCEEEEEECCC
DIFKFKV
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA