| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is vorB [H]
Identifier: 170756108
GI number: 170756108
Start: 3734256
End: 3735326
Strand: Reverse
Name: vorB [H]
Synonym: CLD_1083
Alternate gene names: 170756108
Gene position: 3735326-3734256 (Counterclockwise)
Preceding gene: 170755301
Following gene: 170756406
Centisome position: 94.37
GC content: 34.45
Gene sequence:
>1071_bases ATGGGTGAAAAAGTTTTAATGAAGGGTAATGAGGCTATAGGAGAAGCTGCCATCCAAGCAGGATGTGAATGTTTCTTTGG ATATCCAATTACTCCACAAACAGAAGTAGCAGCTTATATGTCAAAGAAAATGCCTAAAATAGGAAAGACATTTGTTCAAG CTGAAAGTGAAATATCAGCTGTAAATATGGTGTATGGTGCAGCAGGAACAGGAATTAGATGTATGACTTCTTCAAGCTCA CCAGGAATAAGTTTAAAATCAGAAGGACTTTCATATATAGCAGCAGCAGAACTACCATGTGTTATAATAAACATCGTTAG AGGAGGTCCAGGATTAGGAAGTATTCAGCCAGCACAATCAGATTATTTCCAAGCTACAAAAGCAAGTGGACATGGTGATT TTAATATGCCAGTGTTTGCACCAGCTTCTATACAAGAAATGGTTGACTTAATACAAAATGCCTTCGATGTAGCTGATACA TACAGGACACCTTGTATGGTTATGGGAGATGGTATGCTTGGACAAATGATGGAACCTGTTGAATTTAAAGAAAGATCATC TAAAGAGCTTCCAGCAAAAGATTGGGCAGCTAATGGGTTACATGGAAGAAAAGAGCATAATATAATAAACTCCTTATATT TACAACCAGAAATATTAGAACAACATAATATTCATTTACAAAATAAATATGCTAAGATAAAAGAAAATGAAGTTAGATAT GAGTTATACAACTGTGATAAAGAATGCGATTTAATATTAGTTGCATATGGAACAACTTCAAGAATATGCAAAAATGTTGT AAAAATGGCTAAAGAAGAAGGTATAACATTAGGGCTAATAAGACCTATAACAATATGGCCTTTCCCATTTGAAGCATTTG AAAAAACTGTAGACCTTACTAAACATGGATATCTATCCGTAGAAATGAGTTGCGGACAAATGGTTTATGATGTGAAATTA GCATCTAATGGAAGAAAACCAGTAGATTTTTATGGAAGAACAGGTGGAATGGTTCCAGATCCATCAGATATCCTAGAAAA AGTTAAATCTATAGTAGGAGGTGCTAAATAA
Upstream 100 bases:
>100_bases AGTTGATGAAAAGAAAGATGATTGTATAGCTTGTGCATCATGTGCAAGAATATGCCCAGATTGTGTAATAACAGTAGAAA AGTAAGAAGGAGGGGTTATA
Downstream 100 bases:
>100_bases TGGCTATAGTATATCAACCACCTAAAGCATTAATGGACGTTCCTACACATTATTGTCCAGGATGTACTCATGGTGTAATT CATAAATTAGTTGGAGAAGT
Product: 2-ketoisovalerate ferredoxin reductase
Products: NA
Alternate protein names: VOR; 2-oxoisovalerate ferredoxin reductase subunit beta; 2-oxoisovalerate oxidoreductase beta chain [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MGEKVLMKGNEAIGEAAIQAGCECFFGYPITPQTEVAAYMSKKMPKIGKTFVQAESEISAVNMVYGAAGTGIRCMTSSSS PGISLKSEGLSYIAAAELPCVIINIVRGGPGLGSIQPAQSDYFQATKASGHGDFNMPVFAPASIQEMVDLIQNAFDVADT YRTPCMVMGDGMLGQMMEPVEFKERSSKELPAKDWAANGLHGRKEHNIINSLYLQPEILEQHNIHLQNKYAKIKENEVRY ELYNCDKECDLILVAYGTTSRICKNVVKMAKEEGITLGLIRPITIWPFPFEAFEKTVDLTKHGYLSVEMSCGQMVYDVKL ASNGRKPVDFYGRTGGMVPDPSDILEKVKSIVGGAK
Sequences:
>Translated_356_residues MGEKVLMKGNEAIGEAAIQAGCECFFGYPITPQTEVAAYMSKKMPKIGKTFVQAESEISAVNMVYGAAGTGIRCMTSSSS PGISLKSEGLSYIAAAELPCVIINIVRGGPGLGSIQPAQSDYFQATKASGHGDFNMPVFAPASIQEMVDLIQNAFDVADT YRTPCMVMGDGMLGQMMEPVEFKERSSKELPAKDWAANGLHGRKEHNIINSLYLQPEILEQHNIHLQNKYAKIKENEVRY ELYNCDKECDLILVAYGTTSRICKNVVKMAKEEGITLGLIRPITIWPFPFEAFEKTVDLTKHGYLSVEMSCGQMVYDVKL ASNGRKPVDFYGRTGGMVPDPSDILEKVKSIVGGAK >Mature_355_residues GEKVLMKGNEAIGEAAIQAGCECFFGYPITPQTEVAAYMSKKMPKIGKTFVQAESEISAVNMVYGAAGTGIRCMTSSSSP GISLKSEGLSYIAAAELPCVIINIVRGGPGLGSIQPAQSDYFQATKASGHGDFNMPVFAPASIQEMVDLIQNAFDVADTY RTPCMVMGDGMLGQMMEPVEFKERSSKELPAKDWAANGLHGRKEHNIINSLYLQPEILEQHNIHLQNKYAKIKENEVRYE LYNCDKECDLILVAYGTTSRICKNVVKMAKEEGITLGLIRPITIWPFPFEAFEKTVDLTKHGYLSVEMSCGQMVYDVKLA SNGRKPVDFYGRTGGMVPDPSDILEKVKSIVGGAK
Specific function: Unknown
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.7 [H]
Molecular weight: Translated: 38910; Mature: 38779
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEKVLMKGNEAIGEAAIQAGCECFFGYPITPQTEVAAYMSKKMPKIGKTFVQAESEISA CCCCEEECCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH VNMVYGAAGTGIRCMTSSSSPGISLKSEGLSYIAAAELPCVIINIVRGGPGLGSIQPAQS HHEEEECCCCCEEEEECCCCCCCEECCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCH DYFQATKASGHGDFNMPVFAPASIQEMVDLIQNAFDVADTYRTPCMVMGDGMLGQMMEPV HHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHCCCH EFKERSSKELPAKDWAANGLHGRKEHNIINSLYLQPEILEQHNIHLQNKYAKIKENEVRY HHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCCEEECHHHHCCCCCEEE ELYNCDKECDLILVAYGTTSRICKNVVKMAKEEGITLGLIRPITIWPFPFEAFEKTVDLT EEECCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHHHH KHGYLSVEMSCGQMVYDVKLASNGRKPVDFYGRTGGMVPDPSDILEKVKSIVGGAK CCCCEEEEECCCCEEEEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure GEKVLMKGNEAIGEAAIQAGCECFFGYPITPQTEVAAYMSKKMPKIGKTFVQAESEISA CCCEEECCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH VNMVYGAAGTGIRCMTSSSSPGISLKSEGLSYIAAAELPCVIINIVRGGPGLGSIQPAQS HHEEEECCCCCEEEEECCCCCCCEECCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCH DYFQATKASGHGDFNMPVFAPASIQEMVDLIQNAFDVADTYRTPCMVMGDGMLGQMMEPV HHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHCCCH EFKERSSKELPAKDWAANGLHGRKEHNIINSLYLQPEILEQHNIHLQNKYAKIKENEVRY HHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHCCCEEECHHHHCCCCCEEE ELYNCDKECDLILVAYGTTSRICKNVVKMAKEEGITLGLIRPITIWPFPFEAFEKTVDLT EEECCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHHHH KHGYLSVEMSCGQMVYDVKLASNGRKPVDFYGRTGGMVPDPSDILEKVKSIVGGAK CCCCEEEEECCCCEEEEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]