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The map label for this gene is ygfM [C]

Identifier: 170756032

GI number: 170756032

Start: 329352

End: 330191

Strand: Direct

Name: ygfM [C]

Synonym: CLD_0499

Alternate gene names: 170756032

Gene position: 329352-330191 (Clockwise)

Preceding gene: 170754460

Following gene: 170756562

Centisome position: 8.32

GC content: 32.14

Gene sequence:

>840_bases
ATGATTGCATTTAATTTTGAATACTATAAACCTGATTCATTGGATGAGGCGGTAAAGCTGTATAAAGAGCTTAGTAAGAG
TGGAAAAGAACCTTTATATTATTCTGGCGGTACAGAAATAATTACTATGGCAAGAAGAAATGATTTGGTTACAAAGGCAG
TAATAGATATTAAAGGAATTCCTGAGTGTAATGTATTTGAAATAAAAGACAATAAGTTGATAATAGGAGCTGCAGTTACA
CTCAATCATATTGCTGAGAATAAATTAATCCCATTTCTAAGTGAGACAGCAGACTTTCCTGCGGATCATACATCACGTAA
TAAGATAACAGTTGGCGGAAATATTTGCGGTAAAATTATATATAAAGAGGCAGTTTTAGGCCATTTAATTGGAGATAGCA
GTGTAAGTATATACGGGAAAAAAGGTAAAAGGATTGTTCCAATAATTCAGGCTTTTAATCAAAAACTTCAACTGAAAAAA
GGAGAGTTTCTTTTTCAATTGTCAACAGAAATTAGTTATTCTAATTTACCTTATATAAGTGTGAAGAAAACTAAACAAGG
AAAGATGGAGTATCCTTTAATTAGTATGGCTGCACTTAAAAAGAATAATAATATTCAAATGGCATTTAGTGGGGTATGCT
CATTTCCATTCAGGTCTATGGAAATGGAAAAGTATATAAATAATAAAACTCTTGCTAAGGAACAGAGAATAGAACAGGCA
ATAAGCCATTTGCCTGCTCCTATATTTGGCAATATCCAAGGCTCTTCTGAATATAAAAGGTTTGTATTAAGAAATTTACT
TGAGTATACTTTGGAAACACTGGATGGTGAGGGAAGATGA

Upstream 100 bases:

>100_bases
CAGCACTTGGAAATAGCTTATCCTGTGCAGTAGAAGTACCTCTTAATCAATTGCCGTTGATTCCTGAATTTATATGGAAA
GTAAAAGAGGGAGGACATTA

Downstream 100 bases:

>100_bases
TATCATATATTGAAGAGACAAAGATAGAACTAGACATAAATGGCGAAAAGAGAAGCGTGATTGTAAGACCGGCAGATACA
CTTCTTAGAGTACTTAGAGA

Product: xanthine dehydrogenase family protein, FAD-binding subunit

Products: urate; NADH; H+

Alternate protein names: Carbon-Monoxide Dehydrogenase Middle Subunit; Aerobic-Type Carbon Monoxide Dehydrogenase; Xanthine Dehydrogenase; Xanthine Dehydrogenase Subunit; Glyceraldehyde Oxidoreductase Medium Chain; Aerobic-Type CO Dehydrogenase Middle Subunit; Carbon Monoxide Dehydrogenase Medium Chain

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MIAFNFEYYKPDSLDEAVKLYKELSKSGKEPLYYSGGTEIITMARRNDLVTKAVIDIKGIPECNVFEIKDNKLIIGAAVT
LNHIAENKLIPFLSETADFPADHTSRNKITVGGNICGKIIYKEAVLGHLIGDSSVSIYGKKGKRIVPIIQAFNQKLQLKK
GEFLFQLSTEISYSNLPYISVKKTKQGKMEYPLISMAALKKNNNIQMAFSGVCSFPFRSMEMEKYINNKTLAKEQRIEQA
ISHLPAPIFGNIQGSSEYKRFVLRNLLEYTLETLDGEGR

Sequences:

>Translated_279_residues
MIAFNFEYYKPDSLDEAVKLYKELSKSGKEPLYYSGGTEIITMARRNDLVTKAVIDIKGIPECNVFEIKDNKLIIGAAVT
LNHIAENKLIPFLSETADFPADHTSRNKITVGGNICGKIIYKEAVLGHLIGDSSVSIYGKKGKRIVPIIQAFNQKLQLKK
GEFLFQLSTEISYSNLPYISVKKTKQGKMEYPLISMAALKKNNNIQMAFSGVCSFPFRSMEMEKYINNKTLAKEQRIEQA
ISHLPAPIFGNIQGSSEYKRFVLRNLLEYTLETLDGEGR
>Mature_279_residues
MIAFNFEYYKPDSLDEAVKLYKELSKSGKEPLYYSGGTEIITMARRNDLVTKAVIDIKGIPECNVFEIKDNKLIIGAAVT
LNHIAENKLIPFLSETADFPADHTSRNKITVGGNICGKIIYKEAVLGHLIGDSSVSIYGKKGKRIVPIIQAFNQKLQLKK
GEFLFQLSTEISYSNLPYISVKKTKQGKMEYPLISMAALKKNNNIQMAFSGVCSFPFRSMEMEKYINNKTLAKEQRIEQA
ISHLPAPIFGNIQGSSEYKRFVLRNLLEYTLETLDGEGR

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.17.1.4

Molecular weight: Translated: 31408; Mature: 31408

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAFNFEYYKPDSLDEAVKLYKELSKSGKEPLYYSGGTEIITMARRNDLVTKAVIDIKGI
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCHHEEEEEECCC
PECNVFEIKDNKLIIGAAVTLNHIAENKLIPFLSETADFPADHTSRNKITVGGNICGKII
CCCCEEEEECCEEEEEEHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEECCCHHHHHH
YKEAVLGHLIGDSSVSIYGKKGKRIVPIIQAFNQKLQLKKGEFLFQLSTEISYSNLPYIS
HHHHHHHHHHCCCCEEEEECCCCEEEHHHHHCCHHHCCCCCCEEEEEECCCCCCCCCEEE
VKKTKQGKMEYPLISMAALKKNNNIQMAFSGVCSFPFRSMEMEKYINNKTLAKEQRIEQA
EECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
ISHLPAPIFGNIQGSSEYKRFVLRNLLEYTLETLDGEGR
HHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIAFNFEYYKPDSLDEAVKLYKELSKSGKEPLYYSGGTEIITMARRNDLVTKAVIDIKGI
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCHHEEEEEECCC
PECNVFEIKDNKLIIGAAVTLNHIAENKLIPFLSETADFPADHTSRNKITVGGNICGKII
CCCCEEEEECCEEEEEEHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEECCCHHHHHH
YKEAVLGHLIGDSSVSIYGKKGKRIVPIIQAFNQKLQLKKGEFLFQLSTEISYSNLPYIS
HHHHHHHHHHCCCCEEEEECCCCEEEHHHHHCCHHHCCCCCCEEEEEECCCCCCCCCEEE
VKKTKQGKMEYPLISMAALKKNNNIQMAFSGVCSFPFRSMEMEKYINNKTLAKEQRIEQA
EECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
ISHLPAPIFGNIQGSSEYKRFVLRNLLEYTLETLDGEGR
HHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: xanthine; NAD+; H2O

Specific reaction: xanthine + NAD+ + H2O = urate + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA