Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755990

Identifier: 170755990

GI number: 170755990

Start: 1370667

End: 1371407

Strand: Reverse

Name: 170755990

Synonym: CLD_3330

Alternate gene names: NA

Gene position: 1371407-1370667 (Counterclockwise)

Preceding gene: 170754457

Following gene: 170755182

Centisome position: 34.65

GC content: 28.07

Gene sequence:

>741_bases
ATGAGTAAAAATCATAAATTTGATAAACACTTTAATAATTTGAACGAAGAAAATCAAGAAAAGTATATAGAAGAAATGCA
TGAAATGGCAGATAAAGCTGCGAAGAAAAATAATTTAATCTTTGGAGCTGTAGTTATACCTATTGTGATTGTTTGTATAT
TAGTTGTTAAACAAATGGTTTCTTTCTCCTTTAATTTAGCTAAAGATGATAGCGCAACTAAAAATAATAACACTGAAATA
ACTAAAGATGTGAACAATAATAGTAAAGGAACAGGCCAAGAAATTGCTTTAAATGAAAAAATAGCTAAATATATACAAAA
TAAAGATAATAGACAAAAATCCTTTAAAGAGGCAGTGTCTATAAATAAAGGTAGTGAAAAAGGCGTTTCTGTAATATTTA
TATCTCAATTATACAGAAGCAACGGATATGATATACCAAAAAATACTATAAGTACTAAGGGATTATTAGAAGATCTAAAG
AAAAAGAATTGGACAAAAGAAACAGATTACACTAAACTACAAAAAGGTGATATTTGTTTTACTACTGTAGATAGTGCTGG
CTCTCCATCCCATGCGTATATTTTTATGGGTTGGGTAAAAGAAGGAAAAACAGATTATGCTTATGTTTGCGATGGACAAA
CTTCTGATTACGATGATACATTACACAAAAGAAATTTAAGTGTTTCTACAGCAGAAAAAGATAAAATAGCTTTCTTTATG
AAAGCTCCTAATGAGAAATAA

Upstream 100 bases:

>100_bases
TACTTAATATAATTTATCTGCTACAATTATAAAGTAATATATTTTGTTATATTGTTATATTTTAACTGAAATAAATATTT
TCATATAAGGAAGGATAAAT

Downstream 100 bases:

>100_bases
TTATTAAAGCTAGTCTTAATAGACTAGCTTTTTAATATAATTTTTTATCTTATATTCATAAAAAAAATGCCCTTCACCTA
AATATTATTTATTTAGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSKNHKFDKHFNNLNEENQEKYIEEMHEMADKAAKKNNLIFGAVVIPIVIVCILVVKQMVSFSFNLAKDDSATKNNNTEI
TKDVNNNSKGTGQEIALNEKIAKYIQNKDNRQKSFKEAVSINKGSEKGVSVIFISQLYRSNGYDIPKNTISTKGLLEDLK
KKNWTKETDYTKLQKGDICFTTVDSAGSPSHAYIFMGWVKEGKTDYAYVCDGQTSDYDDTLHKRNLSVSTAEKDKIAFFM
KAPNEK

Sequences:

>Translated_246_residues
MSKNHKFDKHFNNLNEENQEKYIEEMHEMADKAAKKNNLIFGAVVIPIVIVCILVVKQMVSFSFNLAKDDSATKNNNTEI
TKDVNNNSKGTGQEIALNEKIAKYIQNKDNRQKSFKEAVSINKGSEKGVSVIFISQLYRSNGYDIPKNTISTKGLLEDLK
KKNWTKETDYTKLQKGDICFTTVDSAGSPSHAYIFMGWVKEGKTDYAYVCDGQTSDYDDTLHKRNLSVSTAEKDKIAFFM
KAPNEK
>Mature_245_residues
SKNHKFDKHFNNLNEENQEKYIEEMHEMADKAAKKNNLIFGAVVIPIVIVCILVVKQMVSFSFNLAKDDSATKNNNTEIT
KDVNNNSKGTGQEIALNEKIAKYIQNKDNRQKSFKEAVSINKGSEKGVSVIFISQLYRSNGYDIPKNTISTKGLLEDLKK
KNWTKETDYTKLQKGDICFTTVDSAGSPSHAYIFMGWVKEGKTDYAYVCDGQTSDYDDTLHKRNLSVSTAEKDKIAFFMK
APNEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27864; Mature: 27733

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNHKFDKHFNNLNEENQEKYIEEMHEMADKAAKKNNLIFGAVVIPIVIVCILVVKQMV
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHH
SFSFNLAKDDSATKNNNTEITKDVNNNSKGTGQEIALNEKIAKYIQNKDNRQKSFKEAVS
HHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
INKGSEKGVSVIFISQLYRSNGYDIPKNTISTKGLLEDLKKKNWTKETDYTKLQKGDICF
CCCCCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEE
TTVDSAGSPSHAYIFMGWVKEGKTDYAYVCDGQTSDYDDTLHKRNLSVSTAEKDKIAFFM
EECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEE
KAPNEK
ECCCCC
>Mature Secondary Structure 
SKNHKFDKHFNNLNEENQEKYIEEMHEMADKAAKKNNLIFGAVVIPIVIVCILVVKQMV
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHH
SFSFNLAKDDSATKNNNTEITKDVNNNSKGTGQEIALNEKIAKYIQNKDNRQKSFKEAVS
HHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
INKGSEKGVSVIFISQLYRSNGYDIPKNTISTKGLLEDLKKKNWTKETDYTKLQKGDICF
CCCCCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEE
TTVDSAGSPSHAYIFMGWVKEGKTDYAYVCDGQTSDYDDTLHKRNLSVSTAEKDKIAFFM
EECCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEE
KAPNEK
ECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA