Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170755954

Identifier: 170755954

GI number: 170755954

Start: 1358233

End: 1359048

Strand: Reverse

Name: 170755954

Synonym: CLD_3345

Alternate gene names: NA

Gene position: 1359048-1358233 (Counterclockwise)

Preceding gene: 170756050

Following gene: 170755271

Centisome position: 34.33

GC content: 28.06

Gene sequence:

>816_bases
ATGAAAAAAAATTTTTTCCCTTTAATATTTTTGTTAGTTTTATGTCTTTGCCCTATTTCATTAGCTCATGCTGAATCAGG
AAGAATAACTTTAAACAAAGTAACCTCTTCTCCTGAAATAATAGAACCTGGTAGTAAATTTAAGATTAATTTTTCTATAA
CTAATAATAAAGAAACTAATCTAAAGGATGTAGTTATAACCTTAGTTGGTTCAGAAGATAAAAAAGTCTTAACAGGTTTT
TCTCCTGTTGGAAGTACCAATGAAATCTATGTAGGTCATATAGATGGTGAAACTTCTAAGGATGCAACTATAGAGATGGC
CTGTGATCCTAATTTAAAAGCTGGCAATTATAATATTTTAGTTAAAATAGGTTATAAATTATATGGAGAATATGTAGAAG
AAACTAGAATAATAGGCTTAATCTTAGGAAATAAGCCTAATCTACTTATAACCTCTCTAGATGCCTCTAATAAGGATGGA
GAAGGCAAAAAATTATCATTGAACTTTGTTAATAGTGGTAAATCTACTTTAAAAGATGTAATGGTAAATATTAAAGCTAA
AGATAAGACCTTCACTAAATATTTTGGCACTATGGAATCAGAAGATGAAAATGAATTTAAACAAGATTTAAATTTATCTG
GTGATATAAAAGGCACTGTAGAAATAAGCTTTAAAGACGAATTAAACAAACCTTCTAAAGTTTCACAAGAATTCTCTATT
AAAGGAAAGATTGACGACACTAATACTGTAAAAAAAGAAAAAAAGAGTTCTGGTATACTAGGTTTTTTTAAAGGCCTATT
AGGAATAGGTGATTAA

Upstream 100 bases:

>100_bases
TCAGGTTTGTGATTATGCAAATAAAATAATAAAAGTGGTAGATGGAAAAGTATTGAATAACTAATTACCCTATGTAAAAT
TATTTAGGAGGTGCACAATA

Downstream 100 bases:

>100_bases
TATGAAGCTTACTGACCTTGCAGAAATTATATGGAGAAACCTTTTAAAAAGAAAAGGAAGAACATTTTTAACTATGCTCG
GAGTAATTATAGGTAGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKKNFFPLIFLLVLCLCPISLAHAESGRITLNKVTSSPEIIEPGSKFKINFSITNNKETNLKDVVITLVGSEDKKVLTGF
SPVGSTNEIYVGHIDGETSKDATIEMACDPNLKAGNYNILVKIGYKLYGEYVEETRIIGLILGNKPNLLITSLDASNKDG
EGKKLSLNFVNSGKSTLKDVMVNIKAKDKTFTKYFGTMESEDENEFKQDLNLSGDIKGTVEISFKDELNKPSKVSQEFSI
KGKIDDTNTVKKEKKSSGILGFFKGLLGIGD

Sequences:

>Translated_271_residues
MKKNFFPLIFLLVLCLCPISLAHAESGRITLNKVTSSPEIIEPGSKFKINFSITNNKETNLKDVVITLVGSEDKKVLTGF
SPVGSTNEIYVGHIDGETSKDATIEMACDPNLKAGNYNILVKIGYKLYGEYVEETRIIGLILGNKPNLLITSLDASNKDG
EGKKLSLNFVNSGKSTLKDVMVNIKAKDKTFTKYFGTMESEDENEFKQDLNLSGDIKGTVEISFKDELNKPSKVSQEFSI
KGKIDDTNTVKKEKKSSGILGFFKGLLGIGD
>Mature_271_residues
MKKNFFPLIFLLVLCLCPISLAHAESGRITLNKVTSSPEIIEPGSKFKINFSITNNKETNLKDVVITLVGSEDKKVLTGF
SPVGSTNEIYVGHIDGETSKDATIEMACDPNLKAGNYNILVKIGYKLYGEYVEETRIIGLILGNKPNLLITSLDASNKDG
EGKKLSLNFVNSGKSTLKDVMVNIKAKDKTFTKYFGTMESEDENEFKQDLNLSGDIKGTVEISFKDELNKPSKVSQEFSI
KGKIDDTNTVKKEKKSSGILGFFKGLLGIGD

Specific function: Unknown

COG id: COG1361

COG function: function code M; S-layer domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29751; Mature: 29751

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNFFPLIFLLVLCLCPISLAHAESGRITLNKVTSSPEIIEPGSKFKINFSITNNKETN
CCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCEECCCCEEEEEEEEECCCCCC
LKDVVITLVGSEDKKVLTGFSPVGSTNEIYVGHIDGETSKDATIEMACDPNLKAGNYNIL
CEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEE
VKIGYKLYGEYVEETRIIGLILGNKPNLLITSLDASNKDGEGKKLSLNFVNSGKSTLKDV
EEECHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHH
MVNIKAKDKTFTKYFGTMESEDENEFKQDLNLSGDIKGTVEISFKDELNKPSKVSQEFSI
EEEEECCCCEEHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEEEHHHCCCCCCCCCCEEE
KGKIDDTNTVKKEKKSSGILGFFKGLLGIGD
EEECCCCHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKKNFFPLIFLLVLCLCPISLAHAESGRITLNKVTSSPEIIEPGSKFKINFSITNNKETN
CCCCCHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCEECCCCEEEEEEEEECCCCCC
LKDVVITLVGSEDKKVLTGFSPVGSTNEIYVGHIDGETSKDATIEMACDPNLKAGNYNIL
CEEEEEEEECCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEE
VKIGYKLYGEYVEETRIIGLILGNKPNLLITSLDASNKDGEGKKLSLNFVNSGKSTLKDV
EEECHHHHHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCHHHHHHH
MVNIKAKDKTFTKYFGTMESEDENEFKQDLNLSGDIKGTVEISFKDELNKPSKVSQEFSI
EEEEECCCCEEHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEEEHHHCCCCCCCCCCEEE
KGKIDDTNTVKKEKKSSGILGFFKGLLGIGD
EEECCCCHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA