The gene/protein map for NC_012563 is currently unavailable.
Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170755931

Identifier: 170755931

GI number: 170755931

Start: 1341546

End: 1341914

Strand: Reverse

Name: 170755931

Synonym: CLD_3360

Alternate gene names: NA

Gene position: 1341914-1341546 (Counterclockwise)

Preceding gene: 170755996

Following gene: 170757470

Centisome position: 33.9

GC content: 39.3

Gene sequence:

>369_bases
ATGTATCCTTATTTTTATTACTTTTATTATGATGATTATATTAGAGGAGCAGCACCTCCTCCAATGCCACCTTTTATGAC
ACCACAAGGTGGTTTTTCCCCTGTTGGCGCCCCCCCAACTACGCCACCTCCAAGCGTTCCCCCAACTAAGCCTATTAAAA
GTGGTCCTGATGTTAAAGCTATTGATCCTGCTTCTATAGGATTATGTAGATATAGATTTACTTATATTTGGCCTTCTAGG
GGAAATCCTTTTTGGATGTGGATTGTATATATAGGGAGAAGATCTATATCCGGCTGGAGATGGACTGGACGTAATTGGGC
CTATGCCGGAATTGACTTAAATAGAATAGATAGTTTTAAATGTTATTAA

Upstream 100 bases:

>100_bases
AACTTTTATATTATAAGTTTTTAACTTATAAGTATTTGTTAGCATTTTTTTAAACTTAGAATACATTAGTATTGTAAATA
ATTTTATAGGAGTCAATGCT

Downstream 100 bases:

>100_bases
TCCTATTCTGATTTTTTATACAAAAAAATTTAAGCTTCTAGTAGAGTTTTAACTCCCTTGAAGCTTAAATTTATTTATTT
TACAATATTCAACTTAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MYPYFYYFYYDDYIRGAAPPPMPPFMTPQGGFSPVGAPPTTPPPSVPPTKPIKSGPDVKAIDPASIGLCRYRFTYIWPSR
GNPFWMWIVYIGRRSISGWRWTGRNWAYAGIDLNRIDSFKCY

Sequences:

>Translated_122_residues
MYPYFYYFYYDDYIRGAAPPPMPPFMTPQGGFSPVGAPPTTPPPSVPPTKPIKSGPDVKAIDPASIGLCRYRFTYIWPSR
GNPFWMWIVYIGRRSISGWRWTGRNWAYAGIDLNRIDSFKCY
>Mature_122_residues
MYPYFYYFYYDDYIRGAAPPPMPPFMTPQGGFSPVGAPPTTPPPSVPPTKPIKSGPDVKAIDPASIGLCRYRFTYIWPSR
GNPFWMWIVYIGRRSISGWRWTGRNWAYAGIDLNRIDSFKCY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14059; Mature: 14059

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPYFYYFYYDDYIRGAAPPPMPPFMTPQGGFSPVGAPPTTPPPSVPPTKPIKSGPDVKA
CCCEEEEEEEECEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
IDPASIGLCRYRFTYIWPSRGNPFWMWIVYIGRRSISGWRWTGRNWAYAGIDLNRIDSFK
ECCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCCCCCEEECCCCEEEECCCCCCCCCEE
CY
CC
>Mature Secondary Structure
MYPYFYYFYYDDYIRGAAPPPMPPFMTPQGGFSPVGAPPTTPPPSVPPTKPIKSGPDVKA
CCCEEEEEEEECEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
IDPASIGLCRYRFTYIWPSRGNPFWMWIVYIGRRSISGWRWTGRNWAYAGIDLNRIDSFK
ECCCCCCEEEEEEEEEECCCCCCEEEEEEEEECCCCCCEEECCCCEEEECCCCCCCCCEE
CY
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA