Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755624

Identifier: 170755624

GI number: 170755624

Start: 865173

End: 865673

Strand: Reverse

Name: 170755624

Synonym: CLD_0018

Alternate gene names: NA

Gene position: 865673-865173 (Counterclockwise)

Preceding gene: 170755266

Following gene: 170754813

Centisome position: 21.87

GC content: 29.74

Gene sequence:

>501_bases
ATGAAAGACGCAAATTATTTTATAGAAAAACTAGACATGATTGCTCATCCTGAAGGTGGGTATTATAAAGAAGGTTTTAT
TTCAGCTGAAAATATAACTGATTCAGATTTAACAACAACTTTTGAGGATAAAAGAATACTGTGGACTAGTATATATTTTT
TATTAAGAAATGGAGAAGTATCTAATTTTCATAGATTAAAATCTGATGAAATGTGGTATTATCATAGTGGTTCTCCTTTA
ACTATATATATGATTACTCCTGAAGGAGAACTTATAACTGAACAATTAGGTCTAGATATAGAGAAAGGTGAAAAGCCTCA
AGTTCTAGTGCCTAAAAACTACATCTTTGGATCTGCAATGAACAACAAAGGATATGCTCTTGTTGGCTGTATGGTATCTC
CTGGATTTGAGTTTAGAGACTTTGAATTATTTGAAAGGGATACTCTTTTAAATCTATATCCTAAATATAAAGAAACAATA
GAAAAATTAACTAGAGCTTAG

Upstream 100 bases:

>100_bases
GTAATTTAAGGAATTGCTAAACTTATAAAAAGCATCAATTATGTGGTAATAAAAACAAAAATAAATATACTTTAATTTAT
ATTTTAAAGGAGATATACAT

Downstream 100 bases:

>100_bases
TTTCTTGATTAAATAATAAAGAGAATTTACACAAATAATAAACATAAATTGTCAATATCATTAATAAAAAAATTAAGGTG
GAATATTATGAGTATCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKDANYFIEKLDMIAHPEGGYYKEGFISAENITDSDLTTTFEDKRILWTSIYFLLRNGEVSNFHRLKSDEMWYYHSGSPL
TIYMITPEGELITEQLGLDIEKGEKPQVLVPKNYIFGSAMNNKGYALVGCMVSPGFEFRDFELFERDTLLNLYPKYKETI
EKLTRA

Sequences:

>Translated_166_residues
MKDANYFIEKLDMIAHPEGGYYKEGFISAENITDSDLTTTFEDKRILWTSIYFLLRNGEVSNFHRLKSDEMWYYHSGSPL
TIYMITPEGELITEQLGLDIEKGEKPQVLVPKNYIFGSAMNNKGYALVGCMVSPGFEFRDFELFERDTLLNLYPKYKETI
EKLTRA
>Mature_166_residues
MKDANYFIEKLDMIAHPEGGYYKEGFISAENITDSDLTTTFEDKRILWTSIYFLLRNGEVSNFHRLKSDEMWYYHSGSPL
TIYMITPEGELITEQLGLDIEKGEKPQVLVPKNYIFGSAMNNKGYALVGCMVSPGFEFRDFELFERDTLLNLYPKYKETI
EKLTRA

Specific function: Unknown

COG id: COG3542

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19298; Mature: 19298

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDANYFIEKLDMIAHPEGGYYKEGFISAENITDSDLTTTFEDKRILWTSIYFLLRNGEV
CCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHEEEEHHCCCCC
SNFHRLKSDEMWYYHSGSPLTIYMITPEGELITEQLGLDIEKGEKPQVLVPKNYIFGSAM
CHHEECCCCCEEEEECCCCEEEEEECCCCCEEHHHHCCCCCCCCCCCEEECCCEEEECEE
NNKGYALVGCMVSPGFEFRDFELFERDTLLNLYPKYKETIEKLTRA
CCCCEEEEEEEECCCCCCCCEEHHCCCCCEECCHHHHHHHHHHHCC
>Mature Secondary Structure
MKDANYFIEKLDMIAHPEGGYYKEGFISAENITDSDLTTTFEDKRILWTSIYFLLRNGEV
CCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHEEEEHHCCCCC
SNFHRLKSDEMWYYHSGSPLTIYMITPEGELITEQLGLDIEKGEKPQVLVPKNYIFGSAM
CHHEECCCCCEEEEECCCCEEEEEECCCCCEEHHHHCCCCCCCCCCCEEECCCEEEECEE
NNKGYALVGCMVSPGFEFRDFELFERDTLLNLYPKYKETIEKLTRA
CCCCEEEEEEEECCCCCCCCEEHHCCCCCEECCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA