| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755590
Identifier: 170755590
GI number: 170755590
Start: 1763947
End: 1764291
Strand: Reverse
Name: 170755590
Synonym: CLD_2959
Alternate gene names: NA
Gene position: 1764291-1763947 (Counterclockwise)
Preceding gene: 170757085
Following gene: 170755546
Centisome position: 44.57
GC content: 35.65
Gene sequence:
>345_bases ATGTGTAATTGTGAAGAAAGAGAAAGAGAAAGACAAACTCACGTTCATGAATTCTTAGGTAGCACTCGATTAGCTGAAAT TCAAACTGAACCTCATAACCATCGTTTTGCTGGTGTTAGTGGTCAAGCTATAAGAATGGGTAATAGTCACGTGCACAGAA TAACTACAAATACAGATTTCTTCGATCACTTTCACAGAATAAATGTTCTTAGTGGCCCTGCAATACCTGTAGGAAATGGT AGACATGTGCACTTTGTATCTGGTGTTACAAGCTTTAATGATGGTCATAGACATGAATTTATTTTTGCAACACTAATTGA AGCTCCTATATTTGAAGAAGATTAA
Upstream 100 bases:
>100_bases TAAATACTTAGCATGTACTCATCTTCTTTCCAAAACATTAGTAACAAAAATCAATTATTTTCATAATATAATACTATCCA GTAATAAAGGAGGTGAGTAT
Downstream 100 bases:
>100_bases TTTTATTTAATATAGGACAGCCTAATATATTTTTATATTAAGCTGTCCATTCTAATATAAAAATACTTGGAATTAACCAA GTGCTTTACTGTGTCTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MCNCEERERERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRMGNSHVHRITTNTDFFDHFHRINVLSGPAIPVGNG RHVHFVSGVTSFNDGHRHEFIFATLIEAPIFEED
Sequences:
>Translated_114_residues MCNCEERERERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRMGNSHVHRITTNTDFFDHFHRINVLSGPAIPVGNG RHVHFVSGVTSFNDGHRHEFIFATLIEAPIFEED >Mature_114_residues MCNCEERERERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRMGNSHVHRITTNTDFFDHFHRINVLSGPAIPVGNG RHVHFVSGVTSFNDGHRHEFIFATLIEAPIFEED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13041; Mature: 13041
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNCEERERERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRMGNSHVHRITTNTDF CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCEEEECCCEEEEEECCCCH FDHFHRINVLSGPAIPVGNGRHVHFVSGVTSFNDGHRHEFIFATLIEAPIFEED HHHHHEEEECCCCCEECCCCCEEEEECCCCCCCCCCCHHHHEEEECCCCCCCCC >Mature Secondary Structure MCNCEERERERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRMGNSHVHRITTNTDF CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCEEEECCCEEEEEECCCCH FDHFHRINVLSGPAIPVGNGRHVHFVSGVTSFNDGHRHEFIFATLIEAPIFEED HHHHHEEEECCCCCEECCCCCEEEEECCCCCCCCCCCHHHHEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA