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The map label for this gene is 170754865

Identifier: 170754865

GI number: 170754865

Start: 3741376

End: 3742656

Strand: Reverse

Name: 170754865

Synonym: CLD_1076

Alternate gene names: NA

Gene position: 3742656-3741376 (Counterclockwise)

Preceding gene: 170757775

Following gene: 170755988

Centisome position: 94.55

GC content: 26.0

Gene sequence:

>1281_bases
ATGGGCAAAAAAAGTAAAACAAAAAATATAATAGTCAAAATTTGTTGTATAATAGCTTCTTTTGCTTTGTGGTTATATAT
ATTTAACATAGAAAATCCAATAAAAGAGCAAAAAATAACGGTTCCCGTTAACATAGTAAATAAGGAAAGTATGAATGAAA
TGGAATTAGCTTTAGTGCCAAAAGAGGCCAGTACTGTTACATTGATAATAAAAGGTAATGTAAAGGATATTTATTCTGTA
AAAGCAGAGGATTTTAAAGTAGAGGCAGACTTGAATTCTTTTGGCTTAAAAAAAGGCGAAAATAAAATACCTGTTAAAGT
CAAGAAAAGCCCTAGTAACATTAAAATAGTAAATGAAGAAAATTTATGGACTAAAATTACTTTGGATAAGCTAAAGTCTA
AGACAGTACCAGTTAAAATAAAAGTAACAGGTACTCCTAAAGAAGGATATGCAGCTTTAAATCCAATTTTAAAAGAAGAA
ACGGCTACCATTTATGGTACAGAAACTTATATTAACAAAGTAAAAGAAGTAGTGGGAAATTGTAACATAGAAGGTAAATC
TTCAGAAATAAAAACTAATATATCTCTTCAGCCCAAAACATATGATGGAGATATAATAAATGAGATTTCAGTAGAGCCAT
CCAAAGTATATGTAGAGATACATTTAAGAAGAATTAAAAAAGTACCGATAAGTATGAAACTTAGTGAAGACATATTAAAC
AATAAAAATATAGAATCTATAACACCATTACAAAATGAAGTTGAGATTTCTGGTGAAGAAGGGGCTCTACAAAATATAAA
ATATATAAATACAGAAACTATAAATGTTAACTCTATAAAAATAGGGCAGGAAAATATAGAAAGTAATTTGGTATTACCAA
AAGGAGTTATATTAGTAAACGGTAATAATACTGTAAAATTTAAAGTTAAATTTAAAGTTATAGAAGACAAAAAGGAAGAG
GAAAAAAATAAAGATAAAGAGGAAAATAAAGAAGATAAAATAATTGAGAAGAAAGTTACAAAAGATATTAATATTATAAA
TGAACCTAAAGATAAAGAAGTTTCATTAAGTGAGCCTAGTGTAACTATAAATATGAAAGGCAATAAAGATGTTATAGACA
AGATAAATGTGAATAATATAAATTGTTATGTGGATTTAAAAAATGTTAATTTAGGAGAAAATGTAGTAAAAGTTATTGTA
GATATGGGAGATAATAAAATAGATTATAGTGTTAATTTAGACAGTATAAAAGTAACAGTAAAGGAAAAACAGGAGGAATA
A

Upstream 100 bases:

>100_bases
TAACAAGAGGATATGATAAAGAAAAATTAAAGGACATTATGATAAAAATAATAAAAAAAGGTTTTGATGAAGACAGTACT
TTTAGGGGGCAGGTGGTAGA

Downstream 100 bases:

>100_bases
CATGTCATTGAGAATTAATAATTTGACTTTAGAAATAGATGAAGACTTAAATTTATTAAAGAATAAAGTTTGTGAAAAAT
TAAATATATCTTCACATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: YbbR-Like Protein; YbbR-Like; Membrane Associated Protein; Ybbr Family Protein; Secreted Protein

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MGKKSKTKNIIVKICCIIASFALWLYIFNIENPIKEQKITVPVNIVNKESMNEMELALVPKEASTVTLIIKGNVKDIYSV
KAEDFKVEADLNSFGLKKGENKIPVKVKKSPSNIKIVNEENLWTKITLDKLKSKTVPVKIKVTGTPKEGYAALNPILKEE
TATIYGTETYINKVKEVVGNCNIEGKSSEIKTNISLQPKTYDGDIINEISVEPSKVYVEIHLRRIKKVPISMKLSEDILN
NKNIESITPLQNEVEISGEEGALQNIKYINTETINVNSIKIGQENIESNLVLPKGVILVNGNNTVKFKVKFKVIEDKKEE
EKNKDKEENKEDKIIEKKVTKDINIINEPKDKEVSLSEPSVTINMKGNKDVIDKINVNNINCYVDLKNVNLGENVVKVIV
DMGDNKIDYSVNLDSIKVTVKEKQEE

Sequences:

>Translated_426_residues
MGKKSKTKNIIVKICCIIASFALWLYIFNIENPIKEQKITVPVNIVNKESMNEMELALVPKEASTVTLIIKGNVKDIYSV
KAEDFKVEADLNSFGLKKGENKIPVKVKKSPSNIKIVNEENLWTKITLDKLKSKTVPVKIKVTGTPKEGYAALNPILKEE
TATIYGTETYINKVKEVVGNCNIEGKSSEIKTNISLQPKTYDGDIINEISVEPSKVYVEIHLRRIKKVPISMKLSEDILN
NKNIESITPLQNEVEISGEEGALQNIKYINTETINVNSIKIGQENIESNLVLPKGVILVNGNNTVKFKVKFKVIEDKKEE
EKNKDKEENKEDKIIEKKVTKDINIINEPKDKEVSLSEPSVTINMKGNKDVIDKINVNNINCYVDLKNVNLGENVVKVIV
DMGDNKIDYSVNLDSIKVTVKEKQEE
>Mature_425_residues
GKKSKTKNIIVKICCIIASFALWLYIFNIENPIKEQKITVPVNIVNKESMNEMELALVPKEASTVTLIIKGNVKDIYSVK
AEDFKVEADLNSFGLKKGENKIPVKVKKSPSNIKIVNEENLWTKITLDKLKSKTVPVKIKVTGTPKEGYAALNPILKEET
ATIYGTETYINKVKEVVGNCNIEGKSSEIKTNISLQPKTYDGDIINEISVEPSKVYVEIHLRRIKKVPISMKLSEDILNN
KNIESITPLQNEVEISGEEGALQNIKYINTETINVNSIKIGQENIESNLVLPKGVILVNGNNTVKFKVKFKVIEDKKEEE
KNKDKEENKEDKIIEKKVTKDINIINEPKDKEVSLSEPSVTINMKGNKDVIDKINVNNINCYVDLKNVNLGENVVKVIVD
MGDNKIDYSVNLDSIKVTVKEKQEE

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47926; Mature: 47795

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKSKTKNIIVKICCIIASFALWLYIFNIENPIKEQKITVPVNIVNKESMNEMELALVP
CCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEC
KEASTVTLIIKGNVKDIYSVKAEDFKVEADLNSFGLKKGENKIPVKVKKSPSNIKIVNEE
CCCCEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEECC
NLWTKITLDKLKSKTVPVKIKVTGTPKEGYAALNPILKEETATIYGTETYINKVKEVVGN
CCEEEEEHHHHCCCCCEEEEEEECCCCCCCHHHCCHHHCCCEEEEECHHHHHHHHHHHHC
CNIEGKSSEIKTNISLQPKTYDGDIINEISVEPSKVYVEIHLRRIKKVPISMKLSEDILN
CCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEHHHCCCEEEEECHHHHC
NKNIESITPLQNEVEISGEEGALQNIKYINTETINVNSIKIGQENIESNLVLPKGVILVN
CCCCCCCCCCCCEEEECCCCCCCCCEEEEECEEEEEEEEEECHHCCCCCEEECCCEEEEC
GNNTVKFKVKFKVIEDKKEEEKNKDKEENKEDKIIEKKVTKDINIINEPKDKEVSLSEPS
CCCEEEEEEEEEEECCCHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC
VTINMKGNKDVIDKINVNNINCYVDLKNVNLGENVVKVIVDMGDNKIDYSVNLDSIKVTV
EEEEECCCCCCEEEECCCEEEEEEEEECCCCCHHHEEEEEECCCCEEEEEEECCEEEEEE
KEKQEE
EECCCC
>Mature Secondary Structure 
GKKSKTKNIIVKICCIIASFALWLYIFNIENPIKEQKITVPVNIVNKESMNEMELALVP
CCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEC
KEASTVTLIIKGNVKDIYSVKAEDFKVEADLNSFGLKKGENKIPVKVKKSPSNIKIVNEE
CCCCEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEECC
NLWTKITLDKLKSKTVPVKIKVTGTPKEGYAALNPILKEETATIYGTETYINKVKEVVGN
CCEEEEEHHHHCCCCCEEEEEEECCCCCCCHHHCCHHHCCCEEEEECHHHHHHHHHHHHC
CNIEGKSSEIKTNISLQPKTYDGDIINEISVEPSKVYVEIHLRRIKKVPISMKLSEDILN
CCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCEEEEEEEEEHHHCCCEEEEECHHHHC
NKNIESITPLQNEVEISGEEGALQNIKYINTETINVNSIKIGQENIESNLVLPKGVILVN
CCCCCCCCCCCCEEEECCCCCCCCCEEEEECEEEEEEEEEECHHCCCCCEEECCCEEEEC
GNNTVKFKVKFKVIEDKKEEEKNKDKEENKEDKIIEKKVTKDINIINEPKDKEVSLSEPS
CCCEEEEEEEEEEECCCHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC
VTINMKGNKDVIDKINVNNINCYVDLKNVNLGENVVKVIVDMGDNKIDYSVNLDSIKVTV
EEEEECCCCCCEEEECCCEEEEEEEEECCCCCHHHEEEEEECCCCEEEEEEECCEEEEEE
KEKQEE
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA