| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754519
Identifier: 170754519
GI number: 170754519
Start: 406335
End: 406985
Strand: Direct
Name: 170754519
Synonym: CLD_0426
Alternate gene names: NA
Gene position: 406335-406985 (Clockwise)
Preceding gene: 170757151
Following gene: 170755549
Centisome position: 10.27
GC content: 27.96
Gene sequence:
>651_bases ATGAAAAAAGCAAAAAAAAGTCTAATTTTATCACTAGTATTACTATTTATTCCAATAATGGTAATAGGATGCAGTTCTAA ACCAAAGGTAGGTGCTGATGAGACAGCAAAAATTTTATTTGATTTTTATATTAAAGGAGATCAGGAGTCTTTATCAAAAA TTAAAATATCTAAAGATCAAATAGAAGAAATTTCAAAGATGCAAAAGGATAAAACTATATCAACAATAAAAACTAATCTT GCAACAGCAGGCTTGAAAGTTAACGATGAACAAATAAAGCAAATATATGCAGCTCGTGTATCTGCTTTAAAGAAATTATC AGCAAAGGCAGAGGTTGTTTCTCAAGATGATAAATCTGCACAGGTTAAATTAAAAGCGACTCACATTGATGAAGTTGCTC TTGACGAAAAAGCAGCAACAGATGCTGTTGAAGAAGTTAAAAAAATGAATCTTACTGATAGACAAGAAGCTCTTAACAAA GCAACAGATATTTATATAAAAAATTTAATAAAATCATATGAAAATGTAAAACCATCATCTGATATGAAAGAGCAAACTTT TAAATTTATTATAAAAGAAAAGACTTGGATAGCAGAAGATATGAAAAATTTTGGTGAAGGTATTGTTAAGTTAACTTCAG GAATAAAATAA
Upstream 100 bases:
>100_bases ATAGTTAACTTATAATACATGGCATATATAAAAAAAATTGACAAAAAGCTCAAAATATAATATATTTATTTTAAAAATAT ATTATAATTAGGGGGACAAT
Downstream 100 bases:
>100_bases ATTTTATAAGAATAAAATTTATTCTATACATAATAATACAGTTTTAAATAAAAAATTATTAATTAAAATTAAAAGATTAA TTTAAAATTATATATTTATA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKKAKKSLILSLVLLFIPIMVIGCSSKPKVGADETAKILFDFYIKGDQESLSKIKISKDQIEEISKMQKDKTISTIKTNL ATAGLKVNDEQIKQIYAARVSALKKLSAKAEVVSQDDKSAQVKLKATHIDEVALDEKAATDAVEEVKKMNLTDRQEALNK ATDIYIKNLIKSYENVKPSSDMKEQTFKFIIKEKTWIAEDMKNFGEGIVKLTSGIK
Sequences:
>Translated_216_residues MKKAKKSLILSLVLLFIPIMVIGCSSKPKVGADETAKILFDFYIKGDQESLSKIKISKDQIEEISKMQKDKTISTIKTNL ATAGLKVNDEQIKQIYAARVSALKKLSAKAEVVSQDDKSAQVKLKATHIDEVALDEKAATDAVEEVKKMNLTDRQEALNK ATDIYIKNLIKSYENVKPSSDMKEQTFKFIIKEKTWIAEDMKNFGEGIVKLTSGIK >Mature_216_residues MKKAKKSLILSLVLLFIPIMVIGCSSKPKVGADETAKILFDFYIKGDQESLSKIKISKDQIEEISKMQKDKTISTIKTNL ATAGLKVNDEQIKQIYAARVSALKKLSAKAEVVSQDDKSAQVKLKATHIDEVALDEKAATDAVEEVKKMNLTDRQEALNK ATDIYIKNLIKSYENVKPSSDMKEQTFKFIIKEKTWIAEDMKNFGEGIVKLTSGIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24116; Mature: 24116
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAKKSLILSLVLLFIPIMVIGCSSKPKVGADETAKILFDFYIKGDQESLSKIKISKDQ CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHH IEEISKMQKDKTISTIKTNLATAGLKVNDEQIKQIYAARVSALKKLSAKAEVVSQDDKSA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QVKLKATHIDEVALDEKAATDAVEEVKKMNLTDRQEALNKATDIYIKNLIKSYENVKPSS EEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC DMKEQTFKFIIKEKTWIAEDMKNFGEGIVKLTSGIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKAKKSLILSLVLLFIPIMVIGCSSKPKVGADETAKILFDFYIKGDQESLSKIKISKDQ CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHH IEEISKMQKDKTISTIKTNLATAGLKVNDEQIKQIYAARVSALKKLSAKAEVVSQDDKSA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QVKLKATHIDEVALDEKAATDAVEEVKKMNLTDRQEALNKATDIYIKNLIKSYENVKPSS EEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC DMKEQTFKFIIKEKTWIAEDMKNFGEGIVKLTSGIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA