Click here to switch to the map view.

The map label for this gene is ywnA [H]

Identifier: 170754327

GI number: 170754327

Start: 362087

End: 362518

Strand: Direct

Name: ywnA [H]

Synonym: CLD_0466

Alternate gene names: 170754327

Gene position: 362087-362518 (Clockwise)

Preceding gene: 170757421

Following gene: 170755716

Centisome position: 9.15

GC content: 31.94

Gene sequence:

>432_bases
ATGAAAATAAGCAGTAGATTTTCTGTAGCGGTTCATATTTTATCCATATTATCTATGGAAGATAAAAACTTATGTACTTC
TGAGTGGATAGCAGGTAGTGTAAATACCAATCCCGTTGTTATACGAAGAGTAATGGGAATGTTAAAAAGAGCTGGTTTAG
TTAATGTTATAGCAGGTACTGGTGGAGCTTATTTATTAAAGGATTTAGATCAGATAACATTGCTAGATGTTTATAGGGCT
GTGGATGTAGTGAAAGAGGGAGAATTATTTCAATTTCATGACTCACCAAATATAAATTGTCCTATTGGTGCAAATATTCA
ATCTGTTATGGAAGGTGTTTTGTTAAATGCCCAAGAAGCTATGGAACAGGTATTAGAGAATGTAACCATGGAATATATAG
TTACAGGTATAAGAAAAAAAATTAAGAAATAA

Upstream 100 bases:

>100_bases
ATTTACTGCAATAACTATAATTCTACAGTAAAAAGAATTTATAAAACTATTGACTTTAATCATAGTTAGAACTACAATAG
TTACAACAGGAGTGATAATA

Downstream 100 bases:

>100_bases
ATCAATTTTTTTTATAATGGGTGTAACTTACAAAGTTACAACTACTTATTAAATTCATAACTTGTGGAAATAAGTTAATT
ATCATAGATGAAAATTTTTT

Product: rrf2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKISSRFSVAVHILSILSMEDKNLCTSEWIAGSVNTNPVVIRRVMGMLKRAGLVNVIAGTGGAYLLKDLDQITLLDVYRA
VDVVKEGELFQFHDSPNINCPIGANIQSVMEGVLLNAQEAMEQVLENVTMEYIVTGIRKKIKK

Sequences:

>Translated_143_residues
MKISSRFSVAVHILSILSMEDKNLCTSEWIAGSVNTNPVVIRRVMGMLKRAGLVNVIAGTGGAYLLKDLDQITLLDVYRA
VDVVKEGELFQFHDSPNINCPIGANIQSVMEGVLLNAQEAMEQVLENVTMEYIVTGIRKKIKK
>Mature_143_residues
MKISSRFSVAVHILSILSMEDKNLCTSEWIAGSVNTNPVVIRRVMGMLKRAGLVNVIAGTGGAYLLKDLDQITLLDVYRA
VDVVKEGELFQFHDSPNINCPIGANIQSVMEGVLLNAQEAMEQVLENVTMEYIVTGIRKKIKK

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15778; Mature: 15778

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISSRFSVAVHILSILSMEDKNLCTSEWIAGSVNTNPVVIRRVMGMLKRAGLVNVIAGT
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEEEECC
GGAYLLKDLDQITLLDVYRAVDVVKEGELFQFHDSPNINCPIGANIQSVMEGVLLNAQEA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHH
MEQVLENVTMEYIVTGIRKKIKK
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISSRFSVAVHILSILSMEDKNLCTSEWIAGSVNTNPVVIRRVMGMLKRAGLVNVIAGT
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHEEEECC
GGAYLLKDLDQITLLDVYRAVDVVKEGELFQFHDSPNINCPIGANIQSVMEGVLLNAQEA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHH
MEQVLENVTMEYIVTGIRKKIKK
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]