| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754236
Identifier: 170754236
GI number: 170754236
Start: 1687047
End: 1687535
Strand: Reverse
Name: 170754236
Synonym: CLD_3033
Alternate gene names: NA
Gene position: 1687535-1687047 (Counterclockwise)
Preceding gene: 170757709
Following gene: 170756284
Centisome position: 42.63
GC content: 32.92
Gene sequence:
>489_bases ATGGATTTAATTAACACAAAAGAATTTACAAGAGAAGAACTTCTTGATAAAGTACAAGCTGTAGCTGAAAATTATTTTAG AAGTGGTACTTTTTTTTGCAGTGAAGCAGTAGTTCAAACAATTAACGAAGTATTAGGAAAACCTTATGATGAAAGCATAG TTAAAATGGCAAGTGGATTTCCTATAGGACTTGGCAAATCAGGATGTTTATGTGGTGCTGTTTCAGGTGGACAAATGGCC CTAGGTATGGTATATGGTAGAGTTGAAGGTGAAGCTATGAATGAAAAGATGTTTAAAAAATCTAGCAGCCTTCATGATTA TATAAAGAATGAATACAAATCAACTTGTTGTAGAGTAATAACAAGAGAATGGGCTGGAGACAACTTTAAAAGTCCAGAAA GAAAAAAACACTGCATAACAATCACTGGAAAAGTTGCAAGATGGGTTGCAAATGAGCTTATTGAAGACGAACATATTAAA GTAAAATAA
Upstream 100 bases:
>100_bases TATTGGTAAGTTTAAAATATATAACTTATAATAAAAGTTGCGCATTTAATTTAAATTATAATATTAGTGAGTTTTTATAA GTATGTAGGAGGAATGTGTG
Downstream 100 bases:
>100_bases TAACATAAATTTCGAAATATACAAACACTTACAACCTGTGAATATCTTACATAAAATATGATTTTTTTACTTGTTCTTAT ATTTCATGTATATTTTTTTA
Product: redox family protein
Products: NA
Alternate protein names: Redox Family Protein; C-GCAxxG-C-C Redox-Active Protein; C_gcaxxg_c_c Family Protein; Redox-Active Protein C_GCAxxG_C_C Family
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MDLINTKEFTREELLDKVQAVAENYFRSGTFFCSEAVVQTINEVLGKPYDESIVKMASGFPIGLGKSGCLCGAVSGGQMA LGMVYGRVEGEAMNEKMFKKSSSLHDYIKNEYKSTCCRVITREWAGDNFKSPERKKHCITITGKVARWVANELIEDEHIK VK
Sequences:
>Translated_162_residues MDLINTKEFTREELLDKVQAVAENYFRSGTFFCSEAVVQTINEVLGKPYDESIVKMASGFPIGLGKSGCLCGAVSGGQMA LGMVYGRVEGEAMNEKMFKKSSSLHDYIKNEYKSTCCRVITREWAGDNFKSPERKKHCITITGKVARWVANELIEDEHIK VK >Mature_162_residues MDLINTKEFTREELLDKVQAVAENYFRSGTFFCSEAVVQTINEVLGKPYDESIVKMASGFPIGLGKSGCLCGAVSGGQMA LGMVYGRVEGEAMNEKMFKKSSSLHDYIKNEYKSTCCRVITREWAGDNFKSPERKKHCITITGKVARWVANELIEDEHIK VK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18144; Mature: 18144
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLINTKEFTREELLDKVQAVAENYFRSGTFFCSEAVVQTINEVLGKPYDESIVKMASGF CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC PIGLGKSGCLCGAVSGGQMALGMVYGRVEGEAMNEKMFKKSSSLHDYIKNEYKSTCCRVI CCCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TREWAGDNFKSPERKKHCITITGKVARWVANELIEDEHIKVK HHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDLINTKEFTREELLDKVQAVAENYFRSGTFFCSEAVVQTINEVLGKPYDESIVKMASGF CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC PIGLGKSGCLCGAVSGGQMALGMVYGRVEGEAMNEKMFKKSSSLHDYIKNEYKSTCCRVI CCCCCCCCCEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TREWAGDNFKSPERKKHCITITGKVARWVANELIEDEHIKVK HHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA