| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is mdeA [H]
Identifier: 170752124
GI number: 170752124
Start: 6064113
End: 6065393
Strand: Direct
Name: mdeA [H]
Synonym: Mrad2831_5757
Alternate gene names: 170752124
Gene position: 6064113-6065393 (Clockwise)
Preceding gene: 170752123
Following gene: 170752126
Centisome position: 99.77
GC content: 68.31
Gene sequence:
>1281_bases ATGTCCGACCGCCTGCCCGGCTTCAACACGCTGGCGATCCACGCGGGTGCCGCCCCCGACGCGGCCACCGGCGCACGGGC CACGCCGATCTACCAGACCACCAGCTTCGTGTTCGACGACGTCGACCACGCCGCGTCGCTGTTCGGTCTTCAGGCCTTCG GCAACATCTACACGCGGATCACCAACCCGACGAACGCCGTGCTGGAGGAGCGCATCGCGGCGTTGGAGGGCGGGACCGCC GCCCTGGCGGTCGCCTCCGGCCACGCGGCCGAGTTTCTGACCATGCACGCCCTGATGCAGCCGGGCGACGAGTTCGTGGC CTCGAACAAGCTGTACGGCGGCTCGATCAACCAGTTCAACCACTCGTACAAGAACTTCGGCTGGTCGGTGGCCTGGGCCG ACAACGACGACCCCGCCTCCTTCGAGGCGGCGATCACGCCGCGCACCAAGGCGATCTTCTGCGAATCGATCGCCAATCCC GGCGGCGTCATCACCGACCTCGCGGCGCTCTCGCAGATCGCCAAGAGGCACAACATCCCGCTCGTCGTCGACAACACCAT GGCGACGCCGTACCTGATCCGACCCTTCGAGCACGGCGCCGACATCGTGGTGCACTCGGCCACCAAGTTCCTCGGCGGCC ACGGCAACTCGATCGGCGGCCTGATCGTCGACGGCGGCACGTTCCAGTGGGCCGGTGACGCGCGCTACCCGATGATGAGC CAGCCGCGGCCGGAATATTCCGGCATGGTGCTGGCCGAGACCTTCGGCAATTTCGGCTTCGCCATCGCCTGCCGTGTGCT GGGCCTGCGCGATCTCGGTCCGGCGCTGTCGCCGTTCAACGCCTTCCTGATCCTGAACGGCATCGAGACGCTGCCGCTGC GCATGCAGCGGCACTCCGACAACGCGCTGACGGTAGCCAAGCACCTGTCGACGCATCCGGCGGTGTCGTGGGTGAGCTAT CCCGGCCTGGAGACCGACCGCTACCATCAGCTCGCGCGGCGCTACACGCCGAACGGCGCCGGCGCCGTCTTCACCTTCGG GCTGAAGGGCGGCTACGACGCGGGGGTCAAGCTCGTCTCGAGTCTCCAGCTGTTCTCGCACCTCGCCAATATCGGCGACA CCCGCTCGCTGATCATCCACCCGGCCTCGACGACCCACCGCCAGCTCACCGACGCGCAGAAGACCGCCGCGGGCGCGGGA CCCGACGTGGTGCGGCTGTCGATCGGCCTGGAGGATCCGGCCGACCTGATCGACGATCTCGACGCCGCTCTCGGGGGCTG A
Upstream 100 bases:
>100_bases GCCGGACGCCTAGGGATTGCGGCGCGCGCGGCCGCGGGCGAGTCTTGCGCCGCAAACCCGGGCGGGCGTACAGGCTCGGG TGCTCTGAGGAGACCCGACG
Downstream 100 bases:
>100_bases CGAGCCGACGCCGGATGGCCCGGCCGCGCCGAGACCGGCGATCGCCGCGAGGCGACCCCGGCGGCGCGTCCGGGCCCGAC GTCGCCCGCCGCCCGGGTCT
Product: O-acetylhomoserine aminocarboxypropyltransferase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MSDRLPGFNTLAIHAGAAPDAATGARATPIYQTTSFVFDDVDHAASLFGLQAFGNIYTRITNPTNAVLEERIAALEGGTA ALAVASGHAAEFLTMHALMQPGDEFVASNKLYGGSINQFNHSYKNFGWSVAWADNDDPASFEAAITPRTKAIFCESIANP GGVITDLAALSQIAKRHNIPLVVDNTMATPYLIRPFEHGADIVVHSATKFLGGHGNSIGGLIVDGGTFQWAGDARYPMMS QPRPEYSGMVLAETFGNFGFAIACRVLGLRDLGPALSPFNAFLILNGIETLPLRMQRHSDNALTVAKHLSTHPAVSWVSY PGLETDRYHQLARRYTPNGAGAVFTFGLKGGYDAGVKLVSSLQLFSHLANIGDTRSLIIHPASTTHRQLTDAQKTAAGAG PDVVRLSIGLEDPADLIDDLDAALGG
Sequences:
>Translated_426_residues MSDRLPGFNTLAIHAGAAPDAATGARATPIYQTTSFVFDDVDHAASLFGLQAFGNIYTRITNPTNAVLEERIAALEGGTA ALAVASGHAAEFLTMHALMQPGDEFVASNKLYGGSINQFNHSYKNFGWSVAWADNDDPASFEAAITPRTKAIFCESIANP GGVITDLAALSQIAKRHNIPLVVDNTMATPYLIRPFEHGADIVVHSATKFLGGHGNSIGGLIVDGGTFQWAGDARYPMMS QPRPEYSGMVLAETFGNFGFAIACRVLGLRDLGPALSPFNAFLILNGIETLPLRMQRHSDNALTVAKHLSTHPAVSWVSY PGLETDRYHQLARRYTPNGAGAVFTFGLKGGYDAGVKLVSSLQLFSHLANIGDTRSLIIHPASTTHRQLTDAQKTAAGAG PDVVRLSIGLEDPADLIDDLDAALGG >Mature_425_residues SDRLPGFNTLAIHAGAAPDAATGARATPIYQTTSFVFDDVDHAASLFGLQAFGNIYTRITNPTNAVLEERIAALEGGTAA LAVASGHAAEFLTMHALMQPGDEFVASNKLYGGSINQFNHSYKNFGWSVAWADNDDPASFEAAITPRTKAIFCESIANPG GVITDLAALSQIAKRHNIPLVVDNTMATPYLIRPFEHGADIVVHSATKFLGGHGNSIGGLIVDGGTFQWAGDARYPMMSQ PRPEYSGMVLAETFGNFGFAIACRVLGLRDLGPALSPFNAFLILNGIETLPLRMQRHSDNALTVAKHLSTHPAVSWVSYP GLETDRYHQLARRYTPNGAGAVFTFGLKGGYDAGVKLVSSLQLFSHLANIGDTRSLIIHPASTTHRQLTDAQKTAAGAGP DVVRLSIGLEDPADLIDDLDAALGG
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=405, Percent_Identity=32.5925925925926, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI299473759, Length=406, Percent_Identity=30.0492610837438, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI25453487, Length=405, Percent_Identity=29.1358024691358, Blast_Score=142, Evalue=5e-34, Organism=Escherichia coli, GI1790375, Length=412, Percent_Identity=29.126213592233, Blast_Score=185, Evalue=4e-48, Organism=Escherichia coli, GI1789383, Length=436, Percent_Identity=27.0642201834862, Blast_Score=124, Evalue=9e-30, Organism=Caenorhabditis elegans, GI71980708, Length=416, Percent_Identity=31.7307692307692, Blast_Score=197, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17560056, Length=412, Percent_Identity=32.5242718446602, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17538055, Length=412, Percent_Identity=31.5533980582524, Blast_Score=182, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6323333, Length=431, Percent_Identity=46.4037122969838, Blast_Score=354, Evalue=2e-98, Organism=Saccharomyces cerevisiae, GI6319307, Length=423, Percent_Identity=30.7328605200946, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6321254, Length=442, Percent_Identity=25.5656108597285, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6321170, Length=363, Percent_Identity=26.7217630853994, Blast_Score=106, Evalue=9e-24, Organism=Saccharomyces cerevisiae, GI6321904, Length=429, Percent_Identity=24.7086247086247, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI19922554, Length=423, Percent_Identity=30.9692671394799, Blast_Score=180, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 45228; Mature: 45097
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00868 CYS_MET_METAB_PP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRLPGFNTLAIHAGAAPDAATGARATPIYQTTSFVFDDVDHAASLFGLQAFGNIYTRI CCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEE TNPTNAVLEERIAALEGGTAALAVASGHAAEFLTMHALMQPGDEFVASNKLYGGSINQFN CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHC HSYKNFGWSVAWADNDDPASFEAAITPRTKAIFCESIANPGGVITDLAALSQIAKRHNIP CHHHCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC LVVDNTMATPYLIRPFEHGADIVVHSATKFLGGHGNSIGGLIVDGGTFQWAGDARYPMMS EEEECCCCCCEEECCCCCCCCEEEECHHHHHCCCCCCCCEEEEECCEEEECCCCCCCCCC QPRPEYSGMVLAETFGNFGFAIACRVLGLRDLGPALSPFNAFLILNGIETLPLRMQRHSD CCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEECCCC NALTVAKHLSTHPAVSWVSYPGLETDRYHQLARRYTPNGAGAVFTFGLKGGYDAGVKLVS CHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH SLQLFSHLANIGDTRSLIIHPASTTHRQLTDAQKTAAGAGPDVVRLSIGLEDPADLIDDL HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH DAALGG HHHHCC >Mature Secondary Structure SDRLPGFNTLAIHAGAAPDAATGARATPIYQTTSFVFDDVDHAASLFGLQAFGNIYTRI CCCCCCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEE TNPTNAVLEERIAALEGGTAALAVASGHAAEFLTMHALMQPGDEFVASNKLYGGSINQFN CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHC HSYKNFGWSVAWADNDDPASFEAAITPRTKAIFCESIANPGGVITDLAALSQIAKRHNIP CHHHCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC LVVDNTMATPYLIRPFEHGADIVVHSATKFLGGHGNSIGGLIVDGGTFQWAGDARYPMMS EEEECCCCCCEEECCCCCCCCEEEECHHHHHCCCCCCCCEEEEECCEEEECCCCCCCCCC QPRPEYSGMVLAETFGNFGFAIACRVLGLRDLGPALSPFNAFLILNGIETLPLRMQRHSD CCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEECCCC NALTVAKHLSTHPAVSWVSYPGLETDRYHQLARRYTPNGAGAVFTFGLKGGYDAGVKLVS CHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHH SLQLFSHLANIGDTRSLIIHPASTTHRQLTDAQKTAAGAGPDVVRLSIGLEDPADLIDDL HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH DAALGG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]