| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170752118
Identifier: 170752118
GI number: 170752118
Start: 6058197
End: 6059288
Strand: Direct
Name: 170752118
Synonym: Mrad2831_5751
Alternate gene names: NA
Gene position: 6058197-6059288 (Clockwise)
Preceding gene: 170752116
Following gene: 170752122
Centisome position: 99.68
GC content: 75.73
Gene sequence:
>1092_bases GTGTCTTCGCCGGACGGCCGGGATCCGGGCCTGTACGGAGCGACGGCCGGTGTTCGGTCCAGCGCCGGCGCGGCCGGAAC GCAGGCGGGCGCGACCGGCTCCACGGGGCCCGCATCGGGCGCGACCGGGTCGAGCGGATCGACCCCATCGCCCGCGGGAA CGGCTCAATCGAGCGGATCGCCGAACAGCGCCCCGTGCTACTGCACCGGCACGACCATCCGGACCGACCGCGGCGACGTG GCTGTCGAGCGGCTCGTGGTCGGGGACAGCGTCGTCACGGCCGCGGGCCTGCGCCGCCCGATTCGGTGGATCGGACGGCG CACCTATCCCGGATCCTCGGCCCCGCCGAGCGAGCGGCCGGTGCGTATCCGGGCCAGCGCTCTGCACGAGGGGGTTCCGG CCCGCGACCTGCTCGTCTCGCCGGACCACGCCGTGTGGCTGGACGGGCTGTTCGTCGCCGCCGGCCACCTCGTCAACGGC ACCAGCATCACCCGCGGGGAGGTCGTGACCGATCTCACCTACTGGCATGTCGAGCTCGACAGCCACGACCTCCTCATCGC GGAGGGCACGCCGGCCGAGAGCTTCCTGCCCGCTCCCGGCATCCGCCGGCTCTTCGACGGCCCTGGCGCGGACGATCCGT CGATCGTCCCGCAGCCCTACGCGCAGCGCACCGAGCTCGGTCCCCAGCTCGCCGCGTTGCGCAGGCGCCTGATCCGGCGG GCCGGCGCGTCGTTCGCGCACGCGCCTCCGGGCGCCGTGCGGGCGTGGCTGGACCGCTGCGCCCTCCGCGCGGACGGTGC GCTGCGCGTGGCCGGCTGGGCCCACGACCCGGCACAGCCCGACGCTCCCGTGTGCCTGGACATCGTGGTCGACGGCGCGA TCGTGGCGGTGACGGTGGCGGCGGAGTACCGCGCCGACATCGCTGCGGCGGGGGTGGGCGACGGTCGACACGGTTTCGAC CTCGGCGTCGAGGCACCCCTCGCCCCCGGGGTGCCGCACGTGGTCGAGGTGCGCCGCTCGGCCGACGAGGCGGTGATCTG CGCCATGGCCGCCGACGCGGCGGGCGTGTGGCGACCGCTGCTGGCCGCGTAG
Upstream 100 bases:
>100_bases GCAGAGCACGGCGGCGACCGGCACCCGGTTCAGCTCGAGCATCGACTACATCCGCGTCTACTCGAACAACCCCAATGCCG TCGCGGTACCGCAGGACCGC
Downstream 100 bases:
>100_bases CACGCCGCCAGCGGCAAGCTGATCCGGCCGCCGGTCGGAGGCTGTCGGCAGTCGCGCCGCGGGGCGGAAGTCAGGCGCGC CGCATCAGGCCGGGTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Type I Secretion Target Repeat Protein; Hemagglutinin-Related Protein; Type I Secretion Target Repeat-Containing Protein; Triple Helix Repeat-Containing Collagen; Adhesin Family Protein; Peptidase Metallopeptidase; Collagen Triple Helix Repeat-Containing Protein; Collagen Triple Helix Repeat; Peroxidase; Bifunctional Hemolysin/Adenylate Cyclase
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSSPDGRDPGLYGATAGVRSSAGAAGTQAGATGSTGPASGATGSSGSTPSPAGTAQSSGSPNSAPCYCTGTTIRTDRGDV AVERLVVGDSVVTAAGLRRPIRWIGRRTYPGSSAPPSERPVRIRASALHEGVPARDLLVSPDHAVWLDGLFVAAGHLVNG TSITRGEVVTDLTYWHVELDSHDLLIAEGTPAESFLPAPGIRRLFDGPGADDPSIVPQPYAQRTELGPQLAALRRRLIRR AGASFAHAPPGAVRAWLDRCALRADGALRVAGWAHDPAQPDAPVCLDIVVDGAIVAVTVAAEYRADIAAAGVGDGRHGFD LGVEAPLAPGVPHVVEVRRSADEAVICAMAADAAGVWRPLLAA
Sequences:
>Translated_363_residues MSSPDGRDPGLYGATAGVRSSAGAAGTQAGATGSTGPASGATGSSGSTPSPAGTAQSSGSPNSAPCYCTGTTIRTDRGDV AVERLVVGDSVVTAAGLRRPIRWIGRRTYPGSSAPPSERPVRIRASALHEGVPARDLLVSPDHAVWLDGLFVAAGHLVNG TSITRGEVVTDLTYWHVELDSHDLLIAEGTPAESFLPAPGIRRLFDGPGADDPSIVPQPYAQRTELGPQLAALRRRLIRR AGASFAHAPPGAVRAWLDRCALRADGALRVAGWAHDPAQPDAPVCLDIVVDGAIVAVTVAAEYRADIAAAGVGDGRHGFD LGVEAPLAPGVPHVVEVRRSADEAVICAMAADAAGVWRPLLAA >Mature_362_residues SSPDGRDPGLYGATAGVRSSAGAAGTQAGATGSTGPASGATGSSGSTPSPAGTAQSSGSPNSAPCYCTGTTIRTDRGDVA VERLVVGDSVVTAAGLRRPIRWIGRRTYPGSSAPPSERPVRIRASALHEGVPARDLLVSPDHAVWLDGLFVAAGHLVNGT SITRGEVVTDLTYWHVELDSHDLLIAEGTPAESFLPAPGIRRLFDGPGADDPSIVPQPYAQRTELGPQLAALRRRLIRRA GASFAHAPPGAVRAWLDRCALRADGALRVAGWAHDPAQPDAPVCLDIVVDGAIVAVTVAAEYRADIAAAGVGDGRHGFDL GVEAPLAPGVPHVVEVRRSADEAVICAMAADAAGVWRPLLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37111; Mature: 36980
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPDGRDPGLYGATAGVRSSAGAAGTQAGATGSTGPASGATGSSGSTPSPAGTAQSSGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PNSAPCYCTGTTIRTDRGDVAVERLVVGDSVVTAAGLRRPIRWIGRRTYPGSSAPPSERP CCCCCEEEECCEEECCCCCCEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC VRIRASALHEGVPARDLLVSPDHAVWLDGLFVAAGHLVNGTSITRGEVVTDLTYWHVELD EEEEHHHHHCCCCHHHEEECCCCHHHHHHHHHHHCCEECCCCCCCCCEEEEEEEEEEEEC SHDLLIAEGTPAESFLPAPGIRRLFDGPGADDPSIVPQPYAQRTELGPQLAALRRRLIRR CCCEEEECCCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHH AGASFAHAPPGAVRAWLDRCALRADGALRVAGWAHDPAQPDAPVCLDIVVDGAIVAVTVA HCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCEEEEEEEE AEYRADIAAAGVGDGRHGFDLGVEAPLAPGVPHVVEVRRSADEAVICAMAADAAGVWRPL HHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEHHCHHHHHHHH LAA HCC >Mature Secondary Structure SSPDGRDPGLYGATAGVRSSAGAAGTQAGATGSTGPASGATGSSGSTPSPAGTAQSSGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PNSAPCYCTGTTIRTDRGDVAVERLVVGDSVVTAAGLRRPIRWIGRRTYPGSSAPPSERP CCCCCEEEECCEEECCCCCCEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC VRIRASALHEGVPARDLLVSPDHAVWLDGLFVAAGHLVNGTSITRGEVVTDLTYWHVELD EEEEHHHHHCCCCHHHEEECCCCHHHHHHHHHHHCCEECCCCCCCCCEEEEEEEEEEEEC SHDLLIAEGTPAESFLPAPGIRRLFDGPGADDPSIVPQPYAQRTELGPQLAALRRRLIRR CCCEEEECCCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHH AGASFAHAPPGAVRAWLDRCALRADGALRVAGWAHDPAQPDAPVCLDIVVDGAIVAVTVA HCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEECCEEEEEEEE AEYRADIAAAGVGDGRHGFDLGVEAPLAPGVPHVVEVRRSADEAVICAMAADAAGVWRPL HHHHCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEHHCHHHHHHHH LAA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA