Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is dat [H]

Identifier: 170752004

GI number: 170752004

Start: 5965893

End: 5966750

Strand: Direct

Name: dat [H]

Synonym: Mrad2831_5636

Alternate gene names: 170752004

Gene position: 5965893-5966750 (Clockwise)

Preceding gene: 170752003

Following gene: 170752005

Centisome position: 98.16

GC content: 71.21

Gene sequence:

>858_bases
GTGACCGCTCCCCGCATCGTCTACCTCAACGGCCAGTTCCTCCCCTACGAGGAGGCGCGGGTGCCGATCATGGATCGCGG
CTTCCTGTTCGCGGACGGCATCTACGAGGTCTCGGCGATCATCGACGGCAAGCTCGTCGACAACGCCGCGCACCTCGCGC
GCCTCGACCGCTCGCTGGGCGAGATCGGCATCCGCAACCCGCACGACGCGGCGGGTTGGGAGCGCCTGCAGACCGAGCTC
GTGGCCCGCAACGGCGTCGCCGAGGGGCTCGTCTACATGCAGGTGACCCGCGGCGTCGCCGAGCGCGACTTCGCCTTCCC
GAAGGCCGGCACCGAGCCCACCGTGGTGATGTTCACCCAGGCCAAGACCGTGCTCGCCAACCCGCTCGCCGAGACCGGGG
CCAGGGTGATCACCGTCGAGGACCTGCGCTGGAAGCGCCGGGACATCAAATCGGTGGCCCTGCTGGCGCAGGTCCTCGCC
AAGCAGCAGGCGGCCGAGGCCGGCGTCGCCGAGGCCTGGATGATCGAGGACGGCGCGGTCACCGAAGGTTCCTCCTCGAC
CGCGTTCATCATCAGCCGCGACCGCGTGCTCGTGACCCGGCCGCTCTCCACGGCGCTGCTGCCGGGCATCACCCGCGCCT
CGGTGCTGCGCCTCGCGCAGGAGGCCGACCTGCGGATCGAGGAGCGGCTGATCCCGGTGGACGAGGTCTACGCGGCGCAG
GAGGCCTTCTACACCAGCGCCTCCGCCTTCGTGATGCCGGTCGTCGAGATCGACGGGCGCGCGATCGGCGAGGGGCGGCC
GGGTGCGCTGACCCGGCGTCTGAGGGAGCTCTACATCGAGGCCGCCCGCCAGGGTTGA

Upstream 100 bases:

>100_bases
GGGTCTTCGGCGACCGCTGAGGGTCCCGCACGATTCCTGCTTCGACCCGCCCTCGCGGGCCCGCGTTCCCGGGCCCGCGA
CGAACACAGGACAGCTCCCC

Downstream 100 bases:

>100_bases
GGCCGTCGTATCTCGTCCACAGGCTGGGGCATCGGGCCCGACAGCCGGACAGGAACGGATCCCGTCTCCGACTGTTCCTC
CCCGAATTCGTGTCTCGAAC

Product: class IV aminotransferase

Products: NA

Alternate protein names: D-amino acid aminotransferase; D-amino acid transaminase; DAAT; D-aspartate aminotransferase [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTAPRIVYLNGQFLPYEEARVPIMDRGFLFADGIYEVSAIIDGKLVDNAAHLARLDRSLGEIGIRNPHDAAGWERLQTEL
VARNGVAEGLVYMQVTRGVAERDFAFPKAGTEPTVVMFTQAKTVLANPLAETGARVITVEDLRWKRRDIKSVALLAQVLA
KQQAAEAGVAEAWMIEDGAVTEGSSSTAFIISRDRVLVTRPLSTALLPGITRASVLRLAQEADLRIEERLIPVDEVYAAQ
EAFYTSASAFVMPVVEIDGRAIGEGRPGALTRRLRELYIEAARQG

Sequences:

>Translated_285_residues
MTAPRIVYLNGQFLPYEEARVPIMDRGFLFADGIYEVSAIIDGKLVDNAAHLARLDRSLGEIGIRNPHDAAGWERLQTEL
VARNGVAEGLVYMQVTRGVAERDFAFPKAGTEPTVVMFTQAKTVLANPLAETGARVITVEDLRWKRRDIKSVALLAQVLA
KQQAAEAGVAEAWMIEDGAVTEGSSSTAFIISRDRVLVTRPLSTALLPGITRASVLRLAQEADLRIEERLIPVDEVYAAQ
EAFYTSASAFVMPVVEIDGRAIGEGRPGALTRRLRELYIEAARQG
>Mature_284_residues
TAPRIVYLNGQFLPYEEARVPIMDRGFLFADGIYEVSAIIDGKLVDNAAHLARLDRSLGEIGIRNPHDAAGWERLQTELV
ARNGVAEGLVYMQVTRGVAERDFAFPKAGTEPTVVMFTQAKTVLANPLAETGARVITVEDLRWKRRDIKSVALLAQVLAK
QQAAEAGVAEAWMIEDGAVTEGSSSTAFIISRDRVLVTRPLSTALLPGITRASVLRLAQEADLRIEERLIPVDEVYAAQE
AFYTSASAFVMPVVEIDGRAIGEGRPGALTRRLRELYIEAARQG

Specific function: Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in

COG id: COG0115

COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Escherichia coli, GI48994963, Length=292, Percent_Identity=25, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001544
- InterPro:   IPR018300
- InterPro:   IPR005784 [H]

Pfam domain/function: PF01063 Aminotran_4 [H]

EC number: =2.6.1.21 [H]

Molecular weight: Translated: 31176; Mature: 31045

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPRIVYLNGQFLPYEEARVPIMDRGFLFADGIYEVSAIIDGKLVDNAAHLARLDRSLG
CCCCEEEEECCCCCCHHCCCCCEEECCEEEECCHHEEHHHHCCHHHHHHHHHHHHHHHHH
EIGIRNPHDAAGWERLQTELVARNGVAEGLVYMQVTRGVAERDFAFPKAGTEPTVVMFTQ
HCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCEEEEEEC
AKTVLANPLAETGARVITVEDLRWKRRDIKSVALLAQVLAKQQAAEAGVAEAWMIEDGAV
CHHHHHCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
TEGSSSTAFIISRDRVLVTRPLSTALLPGITRASVLRLAQEADLRIEERLIPVDEVYAAQ
CCCCCCEEEEEECCEEEEECCHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHH
EAFYTSASAFVMPVVEIDGRAIGEGRPGALTRRLRELYIEAARQG
HHHHCCCCEEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAPRIVYLNGQFLPYEEARVPIMDRGFLFADGIYEVSAIIDGKLVDNAAHLARLDRSLG
CCCEEEEECCCCCCHHCCCCCEEECCEEEECCHHEEHHHHCCHHHHHHHHHHHHHHHHH
EIGIRNPHDAAGWERLQTELVARNGVAEGLVYMQVTRGVAERDFAFPKAGTEPTVVMFTQ
HCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHCCCCCCCCCCCEEEEEEC
AKTVLANPLAETGARVITVEDLRWKRRDIKSVALLAQVLAKQQAAEAGVAEAWMIEDGAV
CHHHHHCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
TEGSSSTAFIISRDRVLVTRPLSTALLPGITRASVLRLAQEADLRIEERLIPVDEVYAAQ
CCCCCCEEEEEECCEEEEECCHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHH
EAFYTSASAFVMPVVEIDGRAIGEGRPGALTRRLRELYIEAARQG
HHHHCCCCEEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA