Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is fabI1 [H]
Identifier: 170751893
GI number: 170751893
Start: 5839358
End: 5840182
Strand: Direct
Name: fabI1 [H]
Synonym: Mrad2831_5525
Alternate gene names: 170751893
Gene position: 5839358-5840182 (Clockwise)
Preceding gene: 170751892
Following gene: 170751896
Centisome position: 96.08
GC content: 67.52
Gene sequence:
>825_bases ATGGCGGAACACGGGCAGGGCCTTCTGGCGGGCAAGCGGGGCATCGTCCTCGGGGTCGCCAACAACCGCTCGATCGCCTG GGGCATCGCCCGCAGCGCCCGCGCCCACGGGGCCGAACTGGCCTTCACCTACCAGGGCGACGCCCTGCGCAAGCGCGTGG AGCCCCTCGCCAAGGAACTCGACGCCCACGTGATCGGGCACTGCGACGTCACCGAGTCGGCCACGATCGACGCGGTCTTC GCGGAGGCCGCGAAGGTCTTCCCCGACGGCATCGACTTCGTCGTTCACTGCGTCGCCTTCTCCGACAAGGACGAGCTGAC GGGCCGCTACATCGAGACCTCCGAGGACAACTTTACCAAGTCGCTCCTGGTCTCGTGCTACTCGTTCACCGCGGTGGCCC AGCGCGCCGAGAAGATCATGCGCCCGGGCGGCTCACTGGTGACGCTGACCTATTACGGCGCCGAGAAGTGGATGCCGCAC TACAACGTCATGGGCGTCGCCAAGGCGGCGCTGGAGGCGTCGGTGCGCTACCTCGCGGCCGATCTCGGACCGAAGAACAT CCGGGTCAACGCGATCTCGGCCGGCCCGATCAAGACCCTCGCCGCCTCGGGCATCGGCGATTTCCGCTACATCCTGAAGT GGAACGAGTACAACGCGCCCCTGCGCCGGACCGTGACGATCGGCGAGGTCGGCGAGACCGCGTCCTACCTCGTCTCCGAC ATGGCGGCCGGGATGACCGGCGAGATCCTCCACGTGGATGCCGGCTACCACGTGGTTGGCATGAAGAACCCCGAGGCGCC GGACCTCACCCTCGACAAGGATTGA
Upstream 100 bases:
>100_bases CTGACCGCGCTCGGTGGCGTCCCGGACTTCCGTCGCCGGGCCGCCTCCGCTAAGGAGGCCCCCCGGCCCCGAGAGGGGTC GCGCGGCTTCGGGATCGATC
Downstream 100 bases:
>100_bases GGCCTCGGTCATCGCGGGCGCCGTGATCTGCGACGGCGCGACGGCCTGCGTGGCGCCGTCACCCGGGTCTCTCGGCCGCG CCCGTGGGGAAGGCGGCGCG
Product: enoyl-acyl carrier protein reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase 1 [H]
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MAEHGQGLLAGKRGIVLGVANNRSIAWGIARSARAHGAELAFTYQGDALRKRVEPLAKELDAHVIGHCDVTESATIDAVF AEAAKVFPDGIDFVVHCVAFSDKDELTGRYIETSEDNFTKSLLVSCYSFTAVAQRAEKIMRPGGSLVTLTYYGAEKWMPH YNVMGVAKAALEASVRYLAADLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIGEVGETASYLVSD MAAGMTGEILHVDAGYHVVGMKNPEAPDLTLDKD
Sequences:
>Translated_274_residues MAEHGQGLLAGKRGIVLGVANNRSIAWGIARSARAHGAELAFTYQGDALRKRVEPLAKELDAHVIGHCDVTESATIDAVF AEAAKVFPDGIDFVVHCVAFSDKDELTGRYIETSEDNFTKSLLVSCYSFTAVAQRAEKIMRPGGSLVTLTYYGAEKWMPH YNVMGVAKAALEASVRYLAADLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIGEVGETASYLVSD MAAGMTGEILHVDAGYHVVGMKNPEAPDLTLDKD >Mature_273_residues AEHGQGLLAGKRGIVLGVANNRSIAWGIARSARAHGAELAFTYQGDALRKRVEPLAKELDAHVIGHCDVTESATIDAVFA EAAKVFPDGIDFVVHCVAFSDKDELTGRYIETSEDNFTKSLLVSCYSFTAVAQRAEKIMRPGGSLVTLTYYGAEKWMPHY NVMGVAKAALEASVRYLAADLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIGEVGETASYLVSDM AAGMTGEILHVDAGYHVVGMKNPEAPDLTLDKD
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=260, Percent_Identity=50.3846153846154, Blast_Score=265, Evalue=2e-72,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 29507; Mature: 29376
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHGQGLLAGKRGIVLGVANNRSIAWGIARSARAHGAELAFTYQGDALRKRVEPLAKEL CCCCCCEEEECCCEEEEEECCCCEEEEEHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHC DAHVIGHCDVTESATIDAVFAEAAKVFPDGIDFVVHCVAFSDKDELTGRYIETSEDNFTK CCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEEEECCCHHCCCCEEECCCCHHHH SLLVSCYSFTAVAQRAEKIMRPGGSLVTLTYYGAEKWMPHYNVMGVAKAALEASVRYLAA HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHH DLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIGEVGETASYLVSD CCCCCCEEEEEEECCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHH MAAGMTGEILHVDAGYHVVGMKNPEAPDLTLDKD HHCCCCCCEEEEECCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure AEHGQGLLAGKRGIVLGVANNRSIAWGIARSARAHGAELAFTYQGDALRKRVEPLAKEL CCCCCEEEECCCEEEEEECCCCEEEEEHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHC DAHVIGHCDVTESATIDAVFAEAAKVFPDGIDFVVHCVAFSDKDELTGRYIETSEDNFTK CCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHEEEEEECCCHHCCCCEEECCCCHHHH SLLVSCYSFTAVAQRAEKIMRPGGSLVTLTYYGAEKWMPHYNVMGVAKAALEASVRYLAA HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCHHHHHHHHHHHHHHHHHH DLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIGEVGETASYLVSD CCCCCCEEEEEEECCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHH MAAGMTGEILHVDAGYHVVGMKNPEAPDLTLDKD HHCCCCCCEEEEECCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]