| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751614
Identifier: 170751614
GI number: 170751614
Start: 5557838
End: 5559553
Strand: Direct
Name: 170751614
Synonym: Mrad2831_5235
Alternate gene names: NA
Gene position: 5557838-5559553 (Clockwise)
Preceding gene: 170751613
Following gene: 170751616
Centisome position: 91.44
GC content: 69.52
Gene sequence:
>1716_bases ATGCTGACCCGACGCATCCTCGCCCTGGTGGCGCTCGCCCTGGCGCCCGCGCTCGCGATCCAGGGCTACAACGAGTACGC CCTGCGTACGTCACGCGATGCGGCGGTGCGGGCCGATGCGCTGGGCACCGCCCGGACCGTGGCCGCCGACCTGGGGCAGC TCGCGCAGAGCCTGCGTCAGGTGCTTGACCTCGTCGGCAACGAGGAGGCCGTGCGGCGCAAGGATGCCGGCGCCTGCACC GCCTACCTCGGGGCGATCATCGACCGGCTGCCGCAACTCAGCCTGCTCTCCGTCGCCGAACCCGATGGACGCGTCGTGTG CGACTCCCGCGGTTCCACACCCGGGCTCTACTCGAACGCCGAGCGTGCCTACCACAAGCGCGTCTTGGCCAGCGATGACT TCGCGGTGGGCGACTTCGTGATCGGCGTGCGCACGCGTCAGCCGGCGGTGCACTTCGCACAGCCCGTGCGCGGGTATGAC GACCGCCTCACCGGCGTGGTCGTGGCCAGCGTCGACCTCGCCCGACTGTCGGAGCGCCTGCAGGCGGATTTGCGCTTCGC CAGCACCACCCTGACGGTCACTGACCCGGAGGGAACGGTCTTGGTGCGCCGACCGGATCACGCGGCATGGGTCGGGCGCA AGCTTTCAGGCGAGCGGCTGGCGCGGCTGATGCGAGCCGACGAGACCACCCGTTCCGTCGAAGGTCTCGACGGACGTGCG CGCATCGTCGGTATCGCCAAGCCCGATGGCGCTCTCGCGGGATTCAACGTCATCGTCGGCCGGGACCGCGAGACGGCGTT CGCCGACATCGATGCCGCCACCTATCGCGGCATAGCCGTAATCCTGCTCGGTGCCCTCCTCGCGGTGCTGGCGACGCTTC TCGCGGGAAGGCGCTTCATCGAGCGGCCGGTGCGGCGCCTCCTGCGGGGCGTTGCCGCTTGGCAGGGGGGCGACCTCGAT GCAAGGACCGGGATGAGCGGCCCCTCGGAGTTCGACCGCCTGGGCGCGGCGTTCGACGCCATGGCCACGACGCTTCAGGG CCGGGAGGATGACCTGCACGGCGAGATCGCCCGGGGACGGAGGATGCAGGAGCAGCAGACGACGATGCTGCACGAGTTGA ACCACCGAGTGAAGAACACGCTGGCCACGGTCCAATCGCTGGCACGCCAGGCACGCGGCGGCGAGGAGCAGGCGGCGCAA CTGGAGGCCCGCATCCTCGCCCTGTCGAAGACGCACGACCTGCTGACCCGCGAGGATTGGACGGGCGCCTCGTTGCGGGA CGTGATGGAGAACGAGCTGTCCCCTTACCGCACCGGCGACGACCACATCACCCTGGACGGACCGGACGTGCCCTTGCCGC CACGCTACGCGCTCGCCATCGGCATGACGGTGCATGAACTGGCGACCAACGCGGCCAAGTACGGGGCCCTGTCGGATGTC GGCGGGCAGGTCTGCGTCGCATGGCGTCTCGTGCATTGCGAGGGAGGTGGTCGACGCCTGCATCTCGACTGGCAGGAGAG CGGCGGACCCCGGGTCGAGCCACCCTCCAGGAGTGGTTTTGGCACGAGGCTGATCGCTGGCGGAATGCAACGAGAACTCG GCGGCGAGGTAAGTCTGACGTTCGATCCGACCGGGCTGCGCTGCCTTCTCGACGTACCGCTCCAGGGTAGCCACACGAGC ATGCTGAGCCCGCTGGCGGATGGGTTGGCCCACTGA
Upstream 100 bases:
>100_bases CAGAAGCCCTATTCGGCCGATGACCTGTCGAGGGTATTTCGGCGCGTGACGAGCCGGCGCCCGCATCCGACGCCTTTGCC GGACTGAGCGCTCAGCCCCT
Downstream 100 bases:
>100_bases GACAGTCGCAGCCCCGTTCTCCGCTCGGAATCCCGAGGACCCATGCGGCCGGGTCGGAAGAAGTCTGGATCGGACCGTGC CGTCGGCAGGATGATGGTCG
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MLTRRILALVALALAPALAIQGYNEYALRTSRDAAVRADALGTARTVAADLGQLAQSLRQVLDLVGNEEAVRRKDAGACT AYLGAIIDRLPQLSLLSVAEPDGRVVCDSRGSTPGLYSNAERAYHKRVLASDDFAVGDFVIGVRTRQPAVHFAQPVRGYD DRLTGVVVASVDLARLSERLQADLRFASTTLTVTDPEGTVLVRRPDHAAWVGRKLSGERLARLMRADETTRSVEGLDGRA RIVGIAKPDGALAGFNVIVGRDRETAFADIDAATYRGIAVILLGALLAVLATLLAGRRFIERPVRRLLRGVAAWQGGDLD ARTGMSGPSEFDRLGAAFDAMATTLQGREDDLHGEIARGRRMQEQQTTMLHELNHRVKNTLATVQSLARQARGGEEQAAQ LEARILALSKTHDLLTREDWTGASLRDVMENELSPYRTGDDHITLDGPDVPLPPRYALAIGMTVHELATNAAKYGALSDV GGQVCVAWRLVHCEGGGRRLHLDWQESGGPRVEPPSRSGFGTRLIAGGMQRELGGEVSLTFDPTGLRCLLDVPLQGSHTS MLSPLADGLAH
Sequences:
>Translated_571_residues MLTRRILALVALALAPALAIQGYNEYALRTSRDAAVRADALGTARTVAADLGQLAQSLRQVLDLVGNEEAVRRKDAGACT AYLGAIIDRLPQLSLLSVAEPDGRVVCDSRGSTPGLYSNAERAYHKRVLASDDFAVGDFVIGVRTRQPAVHFAQPVRGYD DRLTGVVVASVDLARLSERLQADLRFASTTLTVTDPEGTVLVRRPDHAAWVGRKLSGERLARLMRADETTRSVEGLDGRA RIVGIAKPDGALAGFNVIVGRDRETAFADIDAATYRGIAVILLGALLAVLATLLAGRRFIERPVRRLLRGVAAWQGGDLD ARTGMSGPSEFDRLGAAFDAMATTLQGREDDLHGEIARGRRMQEQQTTMLHELNHRVKNTLATVQSLARQARGGEEQAAQ LEARILALSKTHDLLTREDWTGASLRDVMENELSPYRTGDDHITLDGPDVPLPPRYALAIGMTVHELATNAAKYGALSDV GGQVCVAWRLVHCEGGGRRLHLDWQESGGPRVEPPSRSGFGTRLIAGGMQRELGGEVSLTFDPTGLRCLLDVPLQGSHTS MLSPLADGLAH >Mature_571_residues MLTRRILALVALALAPALAIQGYNEYALRTSRDAAVRADALGTARTVAADLGQLAQSLRQVLDLVGNEEAVRRKDAGACT AYLGAIIDRLPQLSLLSVAEPDGRVVCDSRGSTPGLYSNAERAYHKRVLASDDFAVGDFVIGVRTRQPAVHFAQPVRGYD DRLTGVVVASVDLARLSERLQADLRFASTTLTVTDPEGTVLVRRPDHAAWVGRKLSGERLARLMRADETTRSVEGLDGRA RIVGIAKPDGALAGFNVIVGRDRETAFADIDAATYRGIAVILLGALLAVLATLLAGRRFIERPVRRLLRGVAAWQGGDLD ARTGMSGPSEFDRLGAAFDAMATTLQGREDDLHGEIARGRRMQEQQTTMLHELNHRVKNTLATVQSLARQARGGEEQAAQ LEARILALSKTHDLLTREDWTGASLRDVMENELSPYRTGDDHITLDGPDVPLPPRYALAIGMTVHELATNAAKYGALSDV GGQVCVAWRLVHCEGGGRRLHLDWQESGGPRVEPPSRSGFGTRLIAGGMQRELGGEVSLTFDPTGLRCLLDVPLQGSHTS MLSPLADGLAH
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG3920
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 61502; Mature: 61502
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS50885 HAMP ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRRILALVALALAPALAIQGYNEYALRTSRDAAVRADALGTARTVAADLGQLAQSLRQ CHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH VLDLVGNEEAVRRKDAGACTAYLGAIIDRLPQLSLLSVAEPDGRVVCDSRGSTPGLYSNA HHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCH ERAYHKRVLASDDFAVGDFVIGVRTRQPAVHFAQPVRGYDDRLTGVVVASVDLARLSERL HHHHHHHHHCCCCCEECEEEEEEECCCCHHHHHHHCCCCCCHHCEEEEEHHHHHHHHHHH QADLRFASTTLTVTDPEGTVLVRRPDHAAWVGRKLSGERLARLMRADETTRSVEGLDGRA HHHHHEEEEEEEEECCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHCHHHHHHCCCCCCE RIVGIAKPDGALAGFNVIVGRDRETAFADIDAATYRGIAVILLGALLAVLATLLAGRRFI EEEEEECCCCCEECCEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHH ERPVRRLLRGVAAWQGGDLDARTGMSGPSEFDRLGAAFDAMATTLQGREDDLHGEIARGR HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH RMQEQQTTMLHELNHRVKNTLATVQSLARQARGGEEQAAQLEARILALSKTHDLLTREDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC TGASLRDVMENELSPYRTGDDHITLDGPDVPLPPRYALAIGMTVHELATNAAKYGALSDV CCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHEECCHHHHHHHHHHHCCCHHHC GGQVCVAWRLVHCEGGGRRLHLDWQESGGPRVEPPSRSGFGTRLIAGGMQRELGGEVSLT CCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCEEEEE FDPTGLRCLLDVPLQGSHTSMLSPLADGLAH ECCCCCEEEEECCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MLTRRILALVALALAPALAIQGYNEYALRTSRDAAVRADALGTARTVAADLGQLAQSLRQ CHHHHHHHHHHHHHHHHHHHCCCCHHHEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH VLDLVGNEEAVRRKDAGACTAYLGAIIDRLPQLSLLSVAEPDGRVVCDSRGSTPGLYSNA HHHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCH ERAYHKRVLASDDFAVGDFVIGVRTRQPAVHFAQPVRGYDDRLTGVVVASVDLARLSERL HHHHHHHHHCCCCCEECEEEEEEECCCCHHHHHHHCCCCCCHHCEEEEEHHHHHHHHHHH QADLRFASTTLTVTDPEGTVLVRRPDHAAWVGRKLSGERLARLMRADETTRSVEGLDGRA HHHHHEEEEEEEEECCCCEEEEECCCCHHHHCCCCCHHHHHHHHHHCHHHHHHCCCCCCE RIVGIAKPDGALAGFNVIVGRDRETAFADIDAATYRGIAVILLGALLAVLATLLAGRRFI EEEEEECCCCCEECCEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHH ERPVRRLLRGVAAWQGGDLDARTGMSGPSEFDRLGAAFDAMATTLQGREDDLHGEIARGR HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH RMQEQQTTMLHELNHRVKNTLATVQSLARQARGGEEQAAQLEARILALSKTHDLLTREDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC TGASLRDVMENELSPYRTGDDHITLDGPDVPLPPRYALAIGMTVHELATNAAKYGALSDV CCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHEECCHHHHHHHHHHHCCCHHHC GGQVCVAWRLVHCEGGGRRLHLDWQESGGPRVEPPSRSGFGTRLIAGGMQRELGGEVSLT CCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHCCHHHHCCCEEEEE FDPTGLRCLLDVPLQGSHTSMLSPLADGLAH ECCCCCEEEEECCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA