| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751541
Identifier: 170751541
GI number: 170751541
Start: 5488677
End: 5490866
Strand: Direct
Name: 170751541
Synonym: Mrad2831_5161
Alternate gene names: NA
Gene position: 5488677-5490866 (Clockwise)
Preceding gene: 170751532
Following gene: 170751542
Centisome position: 90.31
GC content: 76.07
Gene sequence:
>2190_bases ATGCCGTTCTTCGCTCCACGATCCGCGCTCGAGCCCCCCCGCAACGCCGCGCTGTCACCCCTCTTCCTCGCGCTGCTGGC GCTCCTCGTCATGCTCGCCTCGGCCCACGCGGCGCCGGGGCCGGCACGGGGCGGCCTCACGCTGCGCGGGCCGTCCGGCA CCGCGCCGGTCGAGGCCGTCCAGCTCGCGACCGACATCAGCGTCGACGTCAGCGGCCCGACCGCCCGGGCCACCGTCACC CAGGCCTTCCGCAACGTCACGGCGGAGTGGGTCGAGGGCACCTACCTGTACCCCCTGCCGGAGGACGCGGCCGTCGACAG GATGAAGCTCGTCGTCGGCTCCCGCGTGATCATCGCCGACATCCGCGAGCGGGCGGCGGCCAAGCGCGCCTACGAGGCCG CGAAGGCGGCCGGGCAAGCGGCGGCGCTCACCGCGCAGGAGCGGCCCAACGTGTTCACCAACGCGGTCGCCAATATCGGC CCCGGCGAGACGGTGCTGGTCCAGATCACCTATCAGCAGACGATCCCCGTCTCCGGCGAGACGCGGACGCTGCGCCTGCC CCTGGTCGTCGCGCCCCGCTACAATCCCGCCCCCACCTCGGTGGACGCGGTCTCCCTCGACGGCCCGGCCGCGGCGGCCC GCGACCCGGTTCCGGATCGCGCCCGGATCAGCCCGCCGGTGCTCGACCCGGCCCTGTCCGCGCCGACCAACCCGGTCGCC GTCACCGTGCGGCTCCGGGCGGGCTTCGCCGTCGGCGCCGTTCAGAGCGCGACCCACGCGATCCGCGTGATCGAGACCGG CCCGGAGGCGCGGACCGTCACGCTCGCCGAGGGCGTCGTGCCGGCCGACCGCGATCTCGAGCTGACCTGGGCGCCGGTCC CGAGCCGGATGCCCGGACTCGGCCTGTTCCGCGAGACCGTGGCCGGCCGGACCTATCTGCTGGCCGCCGTGAGCCCGCCG GCGATCGAGGCCGACGCGGCCGCCCGGCCGGCGCGCGACGTCACCTTCGTCATCGACAATTCCGGCTCGATGTCGGGCGC CTCGATGCGGCAGGCCAAGGCCGGGCTGCTGGCCGGCCTCGGCCGCCTGAGCCCGCGGGACCGCTTCAACGTCATCCGCT TCGACGACACCTGGGACGCGCTGCATCCCGAGCCGGTCCCGGCGACGCGGGCGGCCCTGGCCGAGGCTGAAGCCTTCGTC GCCGCCCTGGAGGCGCGCGGCGGCACCGAGATGCTGGCGCCGCTCAAGGCGGCGCTCGCCGACCCGCACCCGGAGGACGG GCGCGTCCGCCAGGTCGTGTTCCTCACCGACGGCGCCGTCGGCGACGAGGAGCGGATCTTCGCGGCGATCCACGCGGATC TCGGGCGCACGCGGCTGTTCATGGTCGGCATCGGCTCGGCGCCGAACGGCCACCTGATGCGCCACGCCGCCGAGATCGGC CGCGGCAGCTTCACCGAGATCCGCGACCTCGCGCAGGTCGGCGAGCGGACCCGGGCACTGTACGAGAAGCTGGAATCGCC CGCCGTCACCGACCTGACCGCGACCTTCTCGGTCCCGGGCGTCGCGGTCACGCCGGGCGCGCTGCCCGACCTGTACCGCG GCGAGCCGCTGGTCTTCGCCGCGCAGCTGCCGGGATCGGCCGAGGAAGCGGCCCGCGGGACCGTGACCGTCTCGGGCCGG GTGGGCGGCCGGACCTGGACCCGGACGCTGCCGCTCTCCGGAGCGGGTGAGGGCGCCGGCATCTCCAAGGTCTGGGCGCG TTCCCGGATCGGCGAGACCGAGACGGCGCGCATCACCGGGCGGCTCGGCGCGGACGCGGCCGACGCCACCATCCTGGCGC TGGCCCTGGAGCACGGCCTGACGACGCGGCTGACCAGCCTCGTGGCCATCGACGCGACCCCGCGCCGCGCGCCGGGCACG GCCCTCGTCGCCGCCGACCTGCCGCTGAACCTGCCGGCGGGCTGGGACTTCGCCAAGGTGTTCGGCACGGACCGGCCCGG CGCCGCGCCCGCCGACGACGGGGCGGCCCGGATCGTGCCGATCCGCGCCGACGGCGGGGCGGTCGACCTGCCGCAGACCG GGGCCGGGATCGTGGCGAAGCTCGGCCTGGGCCTGCTCCTCGCCCTGTTGGGCCTCCTGCTGCGCACCGGCCCGACGATC GGCGGCCGGCGGACCGGGAACGCGCGATGA
Upstream 100 bases:
>100_bases AGCCGGGAAAAGGGCGAAGCTTCTCGTGGCGGCGCGGCGGCGGGCGCGGGAGCTTCAGCGACGGGCCGGCCCCGATCCGC CGGCGCAGGAGGTTTCCCCG
Downstream 100 bases:
>100_bases GCCGCCGTCCGGGGACCGGACTGGGGAGGGCCCTCGCGGCCCTCCTCACCCTCGCGGGAATCGGGCTGGCGGCGCAGGCC GCCTGGATCCCCGCCAGGGC
Product: vault protein inter-alpha-trypsin subunit
Products: NA
Alternate protein names: Inter-Alpha-Trypsin Inhibitor Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin; Vault Protein Inter-Alpha-Trypsin Domain Protein; Cell Wall Anchor Domain-Containing Protein; Von Willebrand Factor Type A Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin Domain-Containing Protein; Von Willebrand Factor Type A; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Transmembrane Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; Vault Protein Inter-Alpha-Trypsin Domain; Inter-Alpha-Trypsin Inhibitor Domain Protein; Von Willebrand Factor; Von Willebrand Factor Type A Domain Protein
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MPFFAPRSALEPPRNAALSPLFLALLALLVMLASAHAAPGPARGGLTLRGPSGTAPVEAVQLATDISVDVSGPTARATVT QAFRNVTAEWVEGTYLYPLPEDAAVDRMKLVVGSRVIIADIRERAAAKRAYEAAKAAGQAAALTAQERPNVFTNAVANIG PGETVLVQITYQQTIPVSGETRTLRLPLVVAPRYNPAPTSVDAVSLDGPAAAARDPVPDRARISPPVLDPALSAPTNPVA VTVRLRAGFAVGAVQSATHAIRVIETGPEARTVTLAEGVVPADRDLELTWAPVPSRMPGLGLFRETVAGRTYLLAAVSPP AIEADAAARPARDVTFVIDNSGSMSGASMRQAKAGLLAGLGRLSPRDRFNVIRFDDTWDALHPEPVPATRAALAEAEAFV AALEARGGTEMLAPLKAALADPHPEDGRVRQVVFLTDGAVGDEERIFAAIHADLGRTRLFMVGIGSAPNGHLMRHAAEIG RGSFTEIRDLAQVGERTRALYEKLESPAVTDLTATFSVPGVAVTPGALPDLYRGEPLVFAAQLPGSAEEAARGTVTVSGR VGGRTWTRTLPLSGAGEGAGISKVWARSRIGETETARITGRLGADAADATILALALEHGLTTRLTSLVAIDATPRRAPGT ALVAADLPLNLPAGWDFAKVFGTDRPGAAPADDGAARIVPIRADGGAVDLPQTGAGIVAKLGLGLLLALLGLLLRTGPTI GGRRTGNAR
Sequences:
>Translated_729_residues MPFFAPRSALEPPRNAALSPLFLALLALLVMLASAHAAPGPARGGLTLRGPSGTAPVEAVQLATDISVDVSGPTARATVT QAFRNVTAEWVEGTYLYPLPEDAAVDRMKLVVGSRVIIADIRERAAAKRAYEAAKAAGQAAALTAQERPNVFTNAVANIG PGETVLVQITYQQTIPVSGETRTLRLPLVVAPRYNPAPTSVDAVSLDGPAAAARDPVPDRARISPPVLDPALSAPTNPVA VTVRLRAGFAVGAVQSATHAIRVIETGPEARTVTLAEGVVPADRDLELTWAPVPSRMPGLGLFRETVAGRTYLLAAVSPP AIEADAAARPARDVTFVIDNSGSMSGASMRQAKAGLLAGLGRLSPRDRFNVIRFDDTWDALHPEPVPATRAALAEAEAFV AALEARGGTEMLAPLKAALADPHPEDGRVRQVVFLTDGAVGDEERIFAAIHADLGRTRLFMVGIGSAPNGHLMRHAAEIG RGSFTEIRDLAQVGERTRALYEKLESPAVTDLTATFSVPGVAVTPGALPDLYRGEPLVFAAQLPGSAEEAARGTVTVSGR VGGRTWTRTLPLSGAGEGAGISKVWARSRIGETETARITGRLGADAADATILALALEHGLTTRLTSLVAIDATPRRAPGT ALVAADLPLNLPAGWDFAKVFGTDRPGAAPADDGAARIVPIRADGGAVDLPQTGAGIVAKLGLGLLLALLGLLLRTGPTI GGRRTGNAR >Mature_728_residues PFFAPRSALEPPRNAALSPLFLALLALLVMLASAHAAPGPARGGLTLRGPSGTAPVEAVQLATDISVDVSGPTARATVTQ AFRNVTAEWVEGTYLYPLPEDAAVDRMKLVVGSRVIIADIRERAAAKRAYEAAKAAGQAAALTAQERPNVFTNAVANIGP GETVLVQITYQQTIPVSGETRTLRLPLVVAPRYNPAPTSVDAVSLDGPAAAARDPVPDRARISPPVLDPALSAPTNPVAV TVRLRAGFAVGAVQSATHAIRVIETGPEARTVTLAEGVVPADRDLELTWAPVPSRMPGLGLFRETVAGRTYLLAAVSPPA IEADAAARPARDVTFVIDNSGSMSGASMRQAKAGLLAGLGRLSPRDRFNVIRFDDTWDALHPEPVPATRAALAEAEAFVA ALEARGGTEMLAPLKAALADPHPEDGRVRQVVFLTDGAVGDEERIFAAIHADLGRTRLFMVGIGSAPNGHLMRHAAEIGR GSFTEIRDLAQVGERTRALYEKLESPAVTDLTATFSVPGVAVTPGALPDLYRGEPLVFAAQLPGSAEEAARGTVTVSGRV GGRTWTRTLPLSGAGEGAGISKVWARSRIGETETARITGRLGADAADATILALALEHGLTTRLTSLVAIDATPRRAPGTA LVAADLPLNLPAGWDFAKVFGTDRPGAAPADDGAARIVPIRADGGAVDLPQTGAGIVAKLGLGLLLALLGLLLRTGPTIG GRRTGNAR
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI38195080, Length=679, Percent_Identity=25.7731958762887, Blast_Score=140, Evalue=5e-33, Organism=Homo sapiens, GI194306644, Length=679, Percent_Identity=25.7731958762887, Blast_Score=140, Evalue=5e-33, Organism=Homo sapiens, GI112789550, Length=598, Percent_Identity=23.4113712374582, Blast_Score=136, Evalue=6e-32, Organism=Homo sapiens, GI210147462, Length=558, Percent_Identity=24.5519713261649, Blast_Score=113, Evalue=6e-25, Organism=Homo sapiens, GI38348336, Length=339, Percent_Identity=30.3834808259587, Blast_Score=100, Evalue=6e-21, Organism=Homo sapiens, GI262050538, Length=330, Percent_Identity=27.5757575757576, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI31542984, Length=330, Percent_Identity=27.5757575757576, Blast_Score=91, Evalue=5e-18, Organism=Homo sapiens, GI133925809, Length=321, Percent_Identity=24.9221183800623, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI153945711, Length=243, Percent_Identity=25.1028806584362, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI153945780, Length=227, Percent_Identity=25.5506607929515, Blast_Score=78, Evalue=3e-14, Organism=Homo sapiens, GI49355778, Length=227, Percent_Identity=25.5506607929515, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI156119625, Length=323, Percent_Identity=24.1486068111455, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI261878618, Length=323, Percent_Identity=24.1486068111455, Blast_Score=77, Evalue=8e-14, Organism=Homo sapiens, GI261878616, Length=323, Percent_Identity=24.1486068111455, Blast_Score=77, Evalue=8e-14, Organism=Homo sapiens, GI261878614, Length=323, Percent_Identity=24.1486068111455, Blast_Score=77, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75532; Mature: 75401
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFFAPRSALEPPRNAALSPLFLALLALLVMLASAHAAPGPARGGLTLRGPSGTAPVEAV CCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHE QLATDISVDVSGPTARATVTQAFRNVTAEWVEGTYLYPLPEDAAVDRMKLVVGSRVIIAD EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCEEEEHH IRERAAAKRAYEAAKAAGQAAALTAQERPNVFTNAVANIGPGETVLVQITYQQTIPVSGE HHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCEEEEEEEEEEEECCCCC TRTLRLPLVVAPRYNPAPTSVDAVSLDGPAAAARDPVPDRARISPPVLDPALSAPTNPVA CEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEE VTVRLRAGFAVGAVQSATHAIRVIETGPEARTVTLAEGVVPADRDLELTWAPVPSRMPGL EEEEEECCEEEHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCC GLFRETVAGRTYLLAAVSPPAIEADAAARPARDVTFVIDNSGSMSGASMRQAKAGLLAGL HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH GRLSPRDRFNVIRFDDTWDALHPEPVPATRAALAEAEAFVAALEARGGTEMLAPLKAALA CCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC DPHPEDGRVRQVVFLTDGAVGDEERIFAAIHADLGRTRLFMVGIGSAPNGHLMRHAAEIG CCCCCCCCEEEEEEEECCCCCCHHHEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHC RGSFTEIRDLAQVGERTRALYEKLESPAVTDLTATFSVPGVAVTPGALPDLYRGEPLVFA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCCCHHHCCCCEEEE AQLPGSAEEAARGTVTVSGRVGGRTWTRTLPLSGAGEGAGISKVWARSRIGETETARITG EECCCCHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEE RLGADAADATILALALEHGLTTRLTSLVAIDATPRRAPGTALVAADLPLNLPAGWDFAKV ECCCCCHHHHHHHHHHHCCCHHHHHEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHH FGTDRPGAAPADDGAARIVPIRADGGAVDLPQTGAGIVAKLGLGLLLALLGLLLRTGPTI HCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GGRRTGNAR CCCCCCCCC >Mature Secondary Structure PFFAPRSALEPPRNAALSPLFLALLALLVMLASAHAAPGPARGGLTLRGPSGTAPVEAV CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHE QLATDISVDVSGPTARATVTQAFRNVTAEWVEGTYLYPLPEDAAVDRMKLVVGSRVIIAD EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCEEEEHH IRERAAAKRAYEAAKAAGQAAALTAQERPNVFTNAVANIGPGETVLVQITYQQTIPVSGE HHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCCEEEEEEEEEEEECCCCC TRTLRLPLVVAPRYNPAPTSVDAVSLDGPAAAARDPVPDRARISPPVLDPALSAPTNPVA CEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEE VTVRLRAGFAVGAVQSATHAIRVIETGPEARTVTLAEGVVPADRDLELTWAPVPSRMPGL EEEEEECCEEEHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCC GLFRETVAGRTYLLAAVSPPAIEADAAARPARDVTFVIDNSGSMSGASMRQAKAGLLAGL HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH GRLSPRDRFNVIRFDDTWDALHPEPVPATRAALAEAEAFVAALEARGGTEMLAPLKAALA CCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC DPHPEDGRVRQVVFLTDGAVGDEERIFAAIHADLGRTRLFMVGIGSAPNGHLMRHAAEIG CCCCCCCCEEEEEEEECCCCCCHHHEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHC RGSFTEIRDLAQVGERTRALYEKLESPAVTDLTATFSVPGVAVTPGALPDLYRGEPLVFA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEECCCCCCHHHCCCCEEEE AQLPGSAEEAARGTVTVSGRVGGRTWTRTLPLSGAGEGAGISKVWARSRIGETETARITG EECCCCHHHHCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEE RLGADAADATILALALEHGLTTRLTSLVAIDATPRRAPGTALVAADLPLNLPAGWDFAKV ECCCCCHHHHHHHHHHHCCCHHHHHEEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHH FGTDRPGAAPADDGAARIVPIRADGGAVDLPQTGAGIVAKLGLGLLLALLGLLLRTGPTI HCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GGRRTGNAR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA