| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ppc [H]
Identifier: 170751491
GI number: 170751491
Start: 5434543
End: 5437422
Strand: Reverse
Name: ppc [H]
Synonym: Mrad2831_5111
Alternate gene names: 170751491
Gene position: 5437422-5434543 (Counterclockwise)
Preceding gene: 170751494
Following gene: 170751488
Centisome position: 89.46
GC content: 72.95
Gene sequence:
>2880_bases ATGCAGCACGAGCCGAGCCGCGAGCCCGAGGAACTGGAGGCGCACCTCCTCGGCCTGATCGAGGCCGCCCGGGAGCAGGC CCGGGAGGATCCGTTCCGCAATCCCGTCCTGGCGGTGACCTTGGCGATCACCCGGCGCTTCGACCGGGACGAGATCTCGA CCGGCGACCTGGACGGGCTGTTCGTGCGCCTGCGTGCCGCGGCCCTGGCGGCGCGGGCGGAGCGGCTGCGCGCCTATGTC GGGCTCGACGCCGGCCCGGACGACCCGCAGGCGGGAATTCCCGCCCGGCTCGTGGCGGCGGCCCCCGACCGGGCGGACAG CGTCGAGACCTTCGCGGCCCTGATCCACCGCACCGCCTTCGCGGTGGTGTTCACGGCCCACCCTACCTTCGGCATGCCCC GGGCCGTCGCCGGCCTCCTCGCCGAGGCCGCGAGCCTGCCCGACGCCAAGGACCGCGCCGGGCTGATCGCGCGCGCGGCG GCCCTGTCGACGCGGCCGGACGCGCCGATCACCCTGGATGTCGAGTTCGAGCAGGCCTGCGCGGCGGCCAATAACGGCCG GCTCGCCCTCGACGCCTTCAACGGCGCCCTGCTCGACGCCGCCCGCGCGCGCTGGCCGGACCGCTGGACGGAGCTGACGC CCCGCCCCTTCGCCATCGCCAGCTGGGTCGGCTGCGACACCGACGGACGGACCGATATCGGCTGGTGGGACACCCTGCGC TACCGGCTGATCTCGAAGCGCATGCAGTTCGACCGGGTGATGCGCGACCTGCCGGAGATCCCCGCCTGCCGGGAGGTCCG GGCCCTCGCCGAGAACGCCCTGGCGGCGGTGAACCGCCAGCTCACCGTGGCGCCGCGCCTCGGTGACCAGCCGTCCCTCG AGGCGGTGCACCGCTTCGCCCTGGCGCTCATCATCGAGCGCGAGCGCGCCCAGACCGATGCCGGCGCCCTCGTCGCCGGG CTGACCCAGGCCCTCGAGGCCGCCGACGACGCGGGCGACCAGCGCCGGATCGCCATCCTGCGCGCGGGGGTCGCGACGCA CGGCCTGTCGAACGCCCTGCCGCATTTCCGGCTGAACGCGAGCCAGATCCACAACGCGGTGCGGCGGGTGATCGACCTGG AGGGCGAGCCCACCGACGCGGCTCGGCGCCGCTCGCACCTCGCGACGATCCACACCCTGCTGAACGACGTCCGCCCGGTG GCCGTCGATTTCGGGGCGCTCGCGGCCGAGCGGGCCTCGGCGGCGCGGCTGATGATGACGATCGCCCAGATCCTCAAGCA CGTGGACGGCACCCATCCGGTGCGCTTCCTCATCGCCGAGACCGAGACCGGCTACACCCTGCTCGCGGCCCTCTGGCTCG CGCGCCACTACGGCATCGCCGACAAGCTCGAGATCACGCCGCTGTTCGAGACGGCGAGCGCCCTCGAGCAGGGTATCCGG GTGCTCGACGACGCCCTGCGCAACCCGCACTGGCGGCAGTATCTGAAGCGCATCGGCCGGCTCACCGTGCAGTTCGGCTA CTCCGATTCGGGCCGCTACGTCGGCCAGCTGGCGGCGACCTTCTGGATCGAGCGGCTGCGGCTGCGCATCACCGAGATGC TGGTCCAGAACGGCCTGTCCGACGTCGAGCTCGCGATCTTCGACACGCACGGCGAGTCGATCGGGCGCGGCGCCCATCCG ACCTCCCTGCGCGACCGCCTCGCCTACCTCGCCCCGGAGGATGCGCGGGACCGGGCCCGCAAGGCCGGCATCCGGGTCCG GCTCGAATCGAGCTTCCAGGGCACCGACGGCTACCTGCTGTACGGCACCGAGGCGCTGGCGCGCGCCAGCGTCGCCCGCA TCGCCGAGCACGTCTACGCGCTCGACGTGACGGAGGAGGATTCGTTCCCGGACTACGCCTTGAACGACCGGCCGAAGGCC TCCGACGGCAGGGTCGATCCGATCTACGCCGAGCCGGATTTCGCCCTCGAGTTCTTCACCGCCGCCCGCCAGGACATGGA GGCGCTGGTCGACGACCCGGGCTACGCCGCCCTGCTCGGCACCTTCGGCCCGAGCCTGATCGACCGGACCGGGTCGCGCC CGGTGGCGCGCCAGACCGACAACGGCGGCCCGGCGCGGATCACCCATCCGCGCCAGATGCGGGCGATCCCCAACAACGCG ATCCTGCACCAGCTCGGCTTCCTGGCGAATTCCCTCCACGGGATCGGACGGGCCGCCCAGCGCGGCCCGGACCTGTTCCG CGACATGCGGCGCGATTCGGTGCGCTTCTCCCGGGCCTTCCGGCTGGTCCAGCACGCCGCCTCGGTCGGCGACCTCGACG TGCTGCGGGCCTACATCGACACGCTCGACCCGGCCGTGTGGCTGGAGCGGGCGCGGCGCACCCAGAAGGATTTCCGCCGG GACGAGCTCGTGGTGATCTCGGGCGCGCTGGAGCGCCTCGACCTCGCCCCCGCGCTGCGGAACCTGTTCGGACGCCTGAC CCGGGACTGGCTCGCCCTGAGCGCGGCCGCCCCGGACCTGCCCGCCATGTCGGCCCGGCTGACGCTGCTCCACGCCCTGC GCCTCGCGCTGATCCACCGGATCTGGTTCCTGGCGGTGCACATCCCGGGCTTCCGGCCGCAGGCGGGCATCTCCCGCGAG CAGCTGCTGGAGCGCTTCCTGCGGCTGGACATCGACGGCTGCCTGAAGCTCCTCGACGCGATCTTCCCGGTCACGCCGGA CCCGACGCTCGGCCTCAATTTCGGCGAGCCGGCCGGCCCGCGCGACGTCGGCACCTACGAGTCCGAGCACGCCAACCTGT TCCAGCCGATTCGCCGGATGTTCGATCAGGTGCGGGAAATCTCGGGGATGATCCAGCACGAGGTCGGGGCGTTCGGGTAG
Upstream 100 bases:
>100_bases CCCGCCGCGTCGCGGCCGTGTCCCCGATCGCGCGCGGAACGCTCCTTGCGTGGGCCGTCGGACCGGGTAGATGCGGGCAG ACCGGAGCCGGGACCGACCG
Downstream 100 bases:
>100_bases GCGCGGCCCTCAGGCCGCCTCCACGCGCAGGACCGTGCCGCCGATCCCGGTGACGCGCACCCGCCGGCCCGCCGGCAGGT CGGGCCCCTCGACCCGCCAC
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 959; Mature: 959
Protein sequence:
>959_residues MQHEPSREPEELEAHLLGLIEAAREQAREDPFRNPVLAVTLAITRRFDRDEISTGDLDGLFVRLRAAALAARAERLRAYV GLDAGPDDPQAGIPARLVAAAPDRADSVETFAALIHRTAFAVVFTAHPTFGMPRAVAGLLAEAASLPDAKDRAGLIARAA ALSTRPDAPITLDVEFEQACAAANNGRLALDAFNGALLDAARARWPDRWTELTPRPFAIASWVGCDTDGRTDIGWWDTLR YRLISKRMQFDRVMRDLPEIPACREVRALAENALAAVNRQLTVAPRLGDQPSLEAVHRFALALIIERERAQTDAGALVAG LTQALEAADDAGDQRRIAILRAGVATHGLSNALPHFRLNASQIHNAVRRVIDLEGEPTDAARRRSHLATIHTLLNDVRPV AVDFGALAAERASAARLMMTIAQILKHVDGTHPVRFLIAETETGYTLLAALWLARHYGIADKLEITPLFETASALEQGIR VLDDALRNPHWRQYLKRIGRLTVQFGYSDSGRYVGQLAATFWIERLRLRITEMLVQNGLSDVELAIFDTHGESIGRGAHP TSLRDRLAYLAPEDARDRARKAGIRVRLESSFQGTDGYLLYGTEALARASVARIAEHVYALDVTEEDSFPDYALNDRPKA SDGRVDPIYAEPDFALEFFTAARQDMEALVDDPGYAALLGTFGPSLIDRTGSRPVARQTDNGGPARITHPRQMRAIPNNA ILHQLGFLANSLHGIGRAAQRGPDLFRDMRRDSVRFSRAFRLVQHAASVGDLDVLRAYIDTLDPAVWLERARRTQKDFRR DELVVISGALERLDLAPALRNLFGRLTRDWLALSAAAPDLPAMSARLTLLHALRLALIHRIWFLAVHIPGFRPQAGISRE QLLERFLRLDIDGCLKLLDAIFPVTPDPTLGLNFGEPAGPRDVGTYESEHANLFQPIRRMFDQVREISGMIQHEVGAFG
Sequences:
>Translated_959_residues MQHEPSREPEELEAHLLGLIEAAREQAREDPFRNPVLAVTLAITRRFDRDEISTGDLDGLFVRLRAAALAARAERLRAYV GLDAGPDDPQAGIPARLVAAAPDRADSVETFAALIHRTAFAVVFTAHPTFGMPRAVAGLLAEAASLPDAKDRAGLIARAA ALSTRPDAPITLDVEFEQACAAANNGRLALDAFNGALLDAARARWPDRWTELTPRPFAIASWVGCDTDGRTDIGWWDTLR YRLISKRMQFDRVMRDLPEIPACREVRALAENALAAVNRQLTVAPRLGDQPSLEAVHRFALALIIERERAQTDAGALVAG LTQALEAADDAGDQRRIAILRAGVATHGLSNALPHFRLNASQIHNAVRRVIDLEGEPTDAARRRSHLATIHTLLNDVRPV AVDFGALAAERASAARLMMTIAQILKHVDGTHPVRFLIAETETGYTLLAALWLARHYGIADKLEITPLFETASALEQGIR VLDDALRNPHWRQYLKRIGRLTVQFGYSDSGRYVGQLAATFWIERLRLRITEMLVQNGLSDVELAIFDTHGESIGRGAHP TSLRDRLAYLAPEDARDRARKAGIRVRLESSFQGTDGYLLYGTEALARASVARIAEHVYALDVTEEDSFPDYALNDRPKA SDGRVDPIYAEPDFALEFFTAARQDMEALVDDPGYAALLGTFGPSLIDRTGSRPVARQTDNGGPARITHPRQMRAIPNNA ILHQLGFLANSLHGIGRAAQRGPDLFRDMRRDSVRFSRAFRLVQHAASVGDLDVLRAYIDTLDPAVWLERARRTQKDFRR DELVVISGALERLDLAPALRNLFGRLTRDWLALSAAAPDLPAMSARLTLLHALRLALIHRIWFLAVHIPGFRPQAGISRE QLLERFLRLDIDGCLKLLDAIFPVTPDPTLGLNFGEPAGPRDVGTYESEHANLFQPIRRMFDQVREISGMIQHEVGAFG >Mature_959_residues MQHEPSREPEELEAHLLGLIEAAREQAREDPFRNPVLAVTLAITRRFDRDEISTGDLDGLFVRLRAAALAARAERLRAYV GLDAGPDDPQAGIPARLVAAAPDRADSVETFAALIHRTAFAVVFTAHPTFGMPRAVAGLLAEAASLPDAKDRAGLIARAA ALSTRPDAPITLDVEFEQACAAANNGRLALDAFNGALLDAARARWPDRWTELTPRPFAIASWVGCDTDGRTDIGWWDTLR YRLISKRMQFDRVMRDLPEIPACREVRALAENALAAVNRQLTVAPRLGDQPSLEAVHRFALALIIERERAQTDAGALVAG LTQALEAADDAGDQRRIAILRAGVATHGLSNALPHFRLNASQIHNAVRRVIDLEGEPTDAARRRSHLATIHTLLNDVRPV AVDFGALAAERASAARLMMTIAQILKHVDGTHPVRFLIAETETGYTLLAALWLARHYGIADKLEITPLFETASALEQGIR VLDDALRNPHWRQYLKRIGRLTVQFGYSDSGRYVGQLAATFWIERLRLRITEMLVQNGLSDVELAIFDTHGESIGRGAHP TSLRDRLAYLAPEDARDRARKAGIRVRLESSFQGTDGYLLYGTEALARASVARIAEHVYALDVTEEDSFPDYALNDRPKA SDGRVDPIYAEPDFALEFFTAARQDMEALVDDPGYAALLGTFGPSLIDRTGSRPVARQTDNGGPARITHPRQMRAIPNNA ILHQLGFLANSLHGIGRAAQRGPDLFRDMRRDSVRFSRAFRLVQHAASVGDLDVLRAYIDTLDPAVWLERARRTQKDFRR DELVVISGALERLDLAPALRNLFGRLTRDWLALSAAAPDLPAMSARLTLLHALRLALIHRIWFLAVHIPGFRPQAGISRE QLLERFLRLDIDGCLKLLDAIFPVTPDPTLGLNFGEPAGPRDVGTYESEHANLFQPIRRMFDQVREISGMIQHEVGAFG
Specific function: Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 105905; Mature: 105905
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHEPSREPEELEAHLLGLIEAAREQAREDPFRNPVLAVTLAITRRFDRDEISTGDLDGL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH FVRLRAAALAARAERLRAYVGLDAGPDDPQAGIPARLVAAAPDRADSVETFAALIHRTAF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH AVVFTAHPTFGMPRAVAGLLAEAASLPDAKDRAGLIARAAALSTRPDAPITLDVEFEQAC EEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH AAANNGRLALDAFNGALLDAARARWPDRWTELTPRPFAIASWVGCDTDGRTDIGWWDTLR HCCCCCCEEEEECCCHHHHHHHHCCCHHHHCCCCCCEEHHHEECCCCCCCCCCCHHHHHH YRLISKRMQFDRVMRDLPEIPACREVRALAENALAAVNRQLTVAPRLGDQPSLEAVHRFA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHH LALIIERERAQTDAGALVAGLTQALEAADDAGDQRRIAILRAGVATHGLSNALPHFRLNA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCH SQIHNAVRRVIDLEGEPTDAARRRSHLATIHTLLNDVRPVAVDFGALAAERASAARLMMT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH IAQILKHVDGTHPVRFLIAETETGYTLLAALWLARHYGIADKLEITPLFETASALEQGIR HHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHH VLDDALRNPHWRQYLKRIGRLTVQFGYSDSGRYVGQLAATFWIERLRLRITEMLVQNGLS HHHHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DVELAIFDTHGESIGRGAHPTSLRDRLAYLAPEDARDRARKAGIRVRLESSFQGTDGYLL CEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCCCCEEE YGTEALARASVARIAEHVYALDVTEEDSFPDYALNDRPKASDGRVDPIYAEPDFALEFFT ECHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHH AARQDMEALVDDPGYAALLGTFGPSLIDRTGSRPVARQTDNGGPARITHPRQMRAIPNNA HHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHH ILHQLGFLANSLHGIGRAAQRGPDLFRDMRRDSVRFSRAFRLVQHAASVGDLDVLRAYID HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TLDPAVWLERARRTQKDFRRDELVVISGALERLDLAPALRNLFGRLTRDWLALSAAAPDL HCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAMSARLTLLHALRLALIHRIWFLAVHIPGFRPQAGISREQLLERFLRLDIDGCLKLLDA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH IFPVTPDPTLGLNFGEPAGPRDVGTYESEHANLFQPIRRMFDQVREISGMIQHEVGAFG HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQHEPSREPEELEAHLLGLIEAAREQAREDPFRNPVLAVTLAITRRFDRDEISTGDLDGL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHH FVRLRAAALAARAERLRAYVGLDAGPDDPQAGIPARLVAAAPDRADSVETFAALIHRTAF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH AVVFTAHPTFGMPRAVAGLLAEAASLPDAKDRAGLIARAAALSTRPDAPITLDVEFEQAC EEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHH AAANNGRLALDAFNGALLDAARARWPDRWTELTPRPFAIASWVGCDTDGRTDIGWWDTLR HCCCCCCEEEEECCCHHHHHHHHCCCHHHHCCCCCCEEHHHEECCCCCCCCCCCHHHHHH YRLISKRMQFDRVMRDLPEIPACREVRALAENALAAVNRQLTVAPRLGDQPSLEAVHRFA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHH LALIIERERAQTDAGALVAGLTQALEAADDAGDQRRIAILRAGVATHGLSNALPHFRLNA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCH SQIHNAVRRVIDLEGEPTDAARRRSHLATIHTLLNDVRPVAVDFGALAAERASAARLMMT HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH IAQILKHVDGTHPVRFLIAETETGYTLLAALWLARHYGIADKLEITPLFETASALEQGIR HHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHH VLDDALRNPHWRQYLKRIGRLTVQFGYSDSGRYVGQLAATFWIERLRLRITEMLVQNGLS HHHHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DVELAIFDTHGESIGRGAHPTSLRDRLAYLAPEDARDRARKAGIRVRLESSFQGTDGYLL CEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCCCCEEE YGTEALARASVARIAEHVYALDVTEEDSFPDYALNDRPKASDGRVDPIYAEPDFALEFFT ECHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHH AARQDMEALVDDPGYAALLGTFGPSLIDRTGSRPVARQTDNGGPARITHPRQMRAIPNNA HHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHH ILHQLGFLANSLHGIGRAAQRGPDLFRDMRRDSVRFSRAFRLVQHAASVGDLDVLRAYID HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TLDPAVWLERARRTQKDFRRDELVVISGALERLDLAPALRNLFGRLTRDWLALSAAAPDL HCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAMSARLTLLHALRLALIHRIWFLAVHIPGFRPQAGISREQLLERFLRLDIDGCLKLLDA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH IFPVTPDPTLGLNFGEPAGPRDVGTYESEHANLFQPIRRMFDQVREISGMIQHEVGAFG HCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]