Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is qmcA [H]
Identifier: 170751489
GI number: 170751489
Start: 5433092
End: 5434072
Strand: Direct
Name: qmcA [H]
Synonym: Mrad2831_5109
Alternate gene names: 170751489
Gene position: 5433092-5434072 (Clockwise)
Preceding gene: 170751485
Following gene: 170751490
Centisome position: 89.39
GC content: 72.27
Gene sequence:
>981_bases ATGGGGCTTCCGTTCGGGCTCAGCGTGTTCGCCGTGGGCGTGGCGGCGCTGGTGATCGTCACCCTGGCCGCGGGCGTGAA GATCGTGCCCCAGGGCTACGTCTACACGGTGGAGCGCTTCGGCCGCTACGCCCGCAGCCTCGACGCCGGCCTCGGCCTGA TCACGCCCTTCGTCGAGCGCGTCGGCCGCAAGGTCAACGTGATGGAGCAGGTCATCGACGTGCCGAGCCAGCAGGCCTTC ACCCGCGACAATGCCGGCGTCACCATCGACGCGGTCGTGTTCTACCAGGTCCTCGACGCCGCGCGCGCATCCTACGAGGT CTCGAGCCTCGACCTCGCCGCCACGACGCTGACCATGACCAATATCCGCACCGTGGTCGGCTCGATGGATCTCGACCAGC TCCTCGCCCACCGCGACGAGATCAACGAGCGCCTGCTCCGGGTGATGGATGCGGCGGCCTCGCCCTGGGGCGTCAAGATC AACCGGATCGAGATCAAGGACATCGTGCTCCCGGCCGATCTCGCCGGGGCGATGGCCCGGCAGATGAAGGCCGAGCGCGA GAAGCGCGCCTCGATCCTGGAGGCGGAAGGGCAGCGCGCCGCCGAGATCCTGCGGGCCGAGGGGCGCAAGCAGTCGGCGA TCCTGGAGGCAGAGGGCCGGCGCGAGGCCGCCTTCCGCGACGCGGAGGCGCGGGAGCGCTCCGCCGAGGCCGAGGCGACG GCGACCGGCATGGTCAGCCGGGCGATCGCCGAGGGCGACATCGCGGCGGCGAACTTCCTCGTGGCCGAGAAGTACGTCGA CGCCGTGCGGGCGATCGCCACCGCGCCGAACCAGCGGGTCGTGGTGGTGCCGATCGAGGCTGCGGCGCTCGCCGGCACCC TCGGCGGCATCGGCGAACTCACCCGCTCGGTCTTCGGCGACGGCGCCGCCGCGCCCCGGCGCACCGGGACGCCGCCGAAC GTCGCTGCGCCGCGGGCCTGA
Upstream 100 bases:
>100_bases GGGCGCCCCTGCGTCCGCGGTCGCGGAGCCCGGAGCGGCCTGTTAGGCTGCGGGCCGCGCCGGCCGCGCCGGCCGTGGCG TCGGCAGGGGAGGGGTGTCG
Downstream 100 bases:
>100_bases CGCCGGTGACGATCGCCTCCCTCGCCGGAACCTTCGAGGCCCTCGGGGCGGCCTGGAGCTGGGTGATCGCCGGCCTCGTG CTGGCCGGTGCCGAGATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MGLPFGLSVFAVGVAALVIVTLAAGVKIVPQGYVYTVERFGRYARSLDAGLGLITPFVERVGRKVNVMEQVIDVPSQQAF TRDNAGVTIDAVVFYQVLDAARASYEVSSLDLAATTLTMTNIRTVVGSMDLDQLLAHRDEINERLLRVMDAAASPWGVKI NRIEIKDIVLPADLAGAMARQMKAEREKRASILEAEGQRAAEILRAEGRKQSAILEAEGRREAAFRDAEARERSAEAEAT ATGMVSRAIAEGDIAAANFLVAEKYVDAVRAIATAPNQRVVVVPIEAAALAGTLGGIGELTRSVFGDGAAAPRRTGTPPN VAAPRA
Sequences:
>Translated_326_residues MGLPFGLSVFAVGVAALVIVTLAAGVKIVPQGYVYTVERFGRYARSLDAGLGLITPFVERVGRKVNVMEQVIDVPSQQAF TRDNAGVTIDAVVFYQVLDAARASYEVSSLDLAATTLTMTNIRTVVGSMDLDQLLAHRDEINERLLRVMDAAASPWGVKI NRIEIKDIVLPADLAGAMARQMKAEREKRASILEAEGQRAAEILRAEGRKQSAILEAEGRREAAFRDAEARERSAEAEAT ATGMVSRAIAEGDIAAANFLVAEKYVDAVRAIATAPNQRVVVVPIEAAALAGTLGGIGELTRSVFGDGAAAPRRTGTPPN VAAPRA >Mature_325_residues GLPFGLSVFAVGVAALVIVTLAAGVKIVPQGYVYTVERFGRYARSLDAGLGLITPFVERVGRKVNVMEQVIDVPSQQAFT RDNAGVTIDAVVFYQVLDAARASYEVSSLDLAATTLTMTNIRTVVGSMDLDQLLAHRDEINERLLRVMDAAASPWGVKIN RIEIKDIVLPADLAGAMARQMKAEREKRASILEAEGQRAAEILRAEGRKQSAILEAEGRREAAFRDAEARERSAEAEATA TGMVSRAIAEGDIAAANFLVAEKYVDAVRAIATAPNQRVVVVPIEAAALAGTLGGIGELTRSVFGDGAAAPRRTGTPPNV AAPRA
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family [H]
Homologues:
Organism=Homo sapiens, GI7305503, Length=288, Percent_Identity=35.0694444444444, Blast_Score=161, Evalue=6e-40, Organism=Homo sapiens, GI38016911, Length=203, Percent_Identity=33.0049261083744, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI21686995, Length=201, Percent_Identity=31.8407960199005, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI221316744, Length=201, Percent_Identity=31.8407960199005, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI7657615, Length=189, Percent_Identity=24.3386243386243, Blast_Score=75, Evalue=8e-14, Organism=Escherichia coli, GI1786697, Length=287, Percent_Identity=62.7177700348432, Blast_Score=377, Evalue=1e-106, Organism=Caenorhabditis elegans, GI32564147, Length=267, Percent_Identity=37.8277153558052, Blast_Score=167, Evalue=7e-42, Organism=Caenorhabditis elegans, GI17569493, Length=196, Percent_Identity=29.0816326530612, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI193209764, Length=196, Percent_Identity=29.0816326530612, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17569497, Length=186, Percent_Identity=30.6451612903226, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17569499, Length=152, Percent_Identity=33.5526315789474, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI71989955, Length=160, Percent_Identity=31.25, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71989948, Length=160, Percent_Identity=31.25, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI25153583, Length=201, Percent_Identity=30.3482587064677, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71987612, Length=201, Percent_Identity=30.3482587064677, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71987621, Length=152, Percent_Identity=33.5526315789474, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17570459, Length=207, Percent_Identity=28.9855072463768, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI32566490, Length=212, Percent_Identity=29.2452830188679, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI193210507, Length=207, Percent_Identity=29.4685990338164, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17570161, Length=207, Percent_Identity=29.4685990338164, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI45550506, Length=301, Percent_Identity=33.5548172757475, Blast_Score=161, Evalue=6e-40, Organism=Drosophila melanogaster, GI18860517, Length=152, Percent_Identity=34.8684210526316, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI21356845, Length=202, Percent_Identity=27.7227722772277, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI281361631, Length=197, Percent_Identity=29.9492385786802, Blast_Score=95, Evalue=8e-20, Organism=Drosophila melanogaster, GI281361633, Length=197, Percent_Identity=29.9492385786802, Blast_Score=94, Evalue=9e-20, Organism=Drosophila melanogaster, GI45556022, Length=135, Percent_Identity=39.2592592592593, Blast_Score=94, Evalue=9e-20, Organism=Drosophila melanogaster, GI24657857, Length=197, Percent_Identity=34.5177664974619, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI281365664, Length=197, Percent_Identity=34.5177664974619, Blast_Score=88, Evalue=7e-18, Organism=Drosophila melanogaster, GI62484448, Length=197, Percent_Identity=34.5177664974619, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28573263, Length=199, Percent_Identity=26.6331658291457, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI62484274, Length=197, Percent_Identity=34.010152284264, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI281361635, Length=131, Percent_Identity=30.5343511450382, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR018080 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 34625; Mature: 34494
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPFGLSVFAVGVAALVIVTLAAGVKIVPQGYVYTVERFGRYARSLDAGLGLITPFVER CCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHHHCCHHHHHHHHHH VGRKVNVMEQVIDVPSQQAFTRDNAGVTIDAVVFYQVLDAARASYEVSSLDLAATTLTMT HCCHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH NIRTVVGSMDLDQLLAHRDEINERLLRVMDAAASPWGVKINRIEIKDIVLPADLAGAMAR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHEEECHHHHHHHHH QMKAEREKRASILEAEGQRAAEILRAEGRKQSAILEAEGRREAAFRDAEARERSAEAEAT HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHCCHHHHHHHHHHHHH ATGMVSRAIAEGDIAAANFLVAEKYVDAVRAIATAPNQRVVVVPIEAAALAGTLGGIGEL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCHHHH TRSVFGDGAAAPRRTGTPPNVAAPRA HHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GLPFGLSVFAVGVAALVIVTLAAGVKIVPQGYVYTVERFGRYARSLDAGLGLITPFVER CCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHHHCCHHHHHHHHHH VGRKVNVMEQVIDVPSQQAFTRDNAGVTIDAVVFYQVLDAARASYEVSSLDLAATTLTMT HCCHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH NIRTVVGSMDLDQLLAHRDEINERLLRVMDAAASPWGVKINRIEIKDIVLPADLAGAMAR HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHEEECHHHHHHHHH QMKAEREKRASILEAEGQRAAEILRAEGRKQSAILEAEGRREAAFRDAEARERSAEAEAT HHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCCCHHHHHCCHHHHHHHHHHHHH ATGMVSRAIAEGDIAAANFLVAEKYVDAVRAIATAPNQRVVVVPIEAAALAGTLGGIGEL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCHHHH TRSVFGDGAAAPRRTGTPPNVAAPRA HHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]