Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
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Accession | NC_010505 |
Length | 6,077,833 |
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The map label for this gene is crtK [H]
Identifier: 170751480
GI number: 170751480
Start: 5422632
End: 5423150
Strand: Direct
Name: crtK [H]
Synonym: Mrad2831_5100
Alternate gene names: 170751480
Gene position: 5422632-5423150 (Clockwise)
Preceding gene: 170751477
Following gene: 170751485
Centisome position: 89.22
GC content: 71.87
Gene sequence:
>519_bases ATGACCGCCGCCACACACGTCCCCGGAGGATCGCCCCTGCCGCGCTGGCTGCGCCTCGCCGCCGCGATCCTGCCGGTGGC GGCCACCGCGGCCGTCGGCTCGATGGCGACCCAGGCCGAGATCCCGGGCTGGTACGCGAGCCTGAACAAGCCGGCCTTCA ACCCGCCGAACTGGGTGTTCCCGGTCGCCTGGACGATCCTCTACACGATGATCGCGGTCTCCCTCTGGCGGCTGCTCGGC GCCATGCCGCGCACCGGGCCGAGCCGCGAGGGCTGGTGGCTCGCCCTCGCGGCGTTCCTGGTGCAGATCGCCCTCAACGC CGCCTGGACCCCGGTCTTCTTCACCGCGCACGCGATCGGCGCCGGGCTAATCGTCGTCGCGATGCTGCTGGTGATGGTGC TCTGGACGATCCGGCTGACCTGGCGCTTCGACCGGCTCGCGGCCTGGCTCCTCGTCCCCTACGCGGCCTGGGTCGCGTTC GCGACGCTCCTCAACGCCGCGATCCTGCGGATGAACTGA
Upstream 100 bases:
>100_bases GACATCTGGCGATTCTCGGCGGATGGAGACGGGCGCGTGCCACGGCGCGTGGCCCCCGGCAAGCCGCGCCACACGCCGCG CCCGGTGGAGACCGACGATC
Downstream 100 bases:
>100_bases CCGCCCATCCCGCCGGCGCCCGACCGCGCGCCGGCACGGCTGTCAGGACACGTGTTCGGGCTTCTCCTCGCCCGCGGGCC TGCCATCGTCGCGGGCGCGG
Product: TspO and MBR like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTAATHVPGGSPLPRWLRLAAAILPVAATAAVGSMATQAEIPGWYASLNKPAFNPPNWVFPVAWTILYTMIAVSLWRLLG AMPRTGPSREGWWLALAAFLVQIALNAAWTPVFFTAHAIGAGLIVVAMLLVMVLWTIRLTWRFDRLAAWLLVPYAAWVAF ATLLNAAILRMN
Sequences:
>Translated_172_residues MTAATHVPGGSPLPRWLRLAAAILPVAATAAVGSMATQAEIPGWYASLNKPAFNPPNWVFPVAWTILYTMIAVSLWRLLG AMPRTGPSREGWWLALAAFLVQIALNAAWTPVFFTAHAIGAGLIVVAMLLVMVLWTIRLTWRFDRLAAWLLVPYAAWVAF ATLLNAAILRMN >Mature_171_residues TAATHVPGGSPLPRWLRLAAAILPVAATAAVGSMATQAEIPGWYASLNKPAFNPPNWVFPVAWTILYTMIAVSLWRLLGA MPRTGPSREGWWLALAAFLVQIALNAAWTPVFFTAHAIGAGLIVVAMLLVMVLWTIRLTWRFDRLAAWLLVPYAAWVAFA TLLNAAILRMN
Specific function: Unknown
COG id: COG3476
COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TspO/BZRP family [H]
Homologues:
Organism=Homo sapiens, GI74275350, Length=162, Percent_Identity=32.7160493827161, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI19920472, Length=159, Percent_Identity=37.7358490566038, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004307 [H]
Pfam domain/function: PF03073 TspO_MBR [H]
EC number: NA
Molecular weight: Translated: 18777; Mature: 18645
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAATHVPGGSPLPRWLRLAAAILPVAATAAVGSMATQAEIPGWYASLNKPAFNPPNWVF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHH PVAWTILYTMIAVSLWRLLGAMPRTGPSREGWWLALAAFLVQIALNAAWTPVFFTAHAIG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AGLIVVAMLLVMVLWTIRLTWRFDRLAAWLLVPYAAWVAFATLLNAAILRMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAATHVPGGSPLPRWLRLAAAILPVAATAAVGSMATQAEIPGWYASLNKPAFNPPNWVF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHH PVAWTILYTMIAVSLWRLLGAMPRTGPSREGWWLALAAFLVQIALNAAWTPVFFTAHAIG HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AGLIVVAMLLVMVLWTIRLTWRFDRLAAWLLVPYAAWVAFATLLNAAILRMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2747617 [H]