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The map label for this gene is flgD [H]

Identifier: 170751442

GI number: 170751442

Start: 5375675

End: 5376361

Strand: Reverse

Name: flgD [H]

Synonym: Mrad2831_5061

Alternate gene names: 170751442

Gene position: 5376361-5375675 (Counterclockwise)

Preceding gene: 170751443

Following gene: 170751441

Centisome position: 88.46

GC content: 66.67

Gene sequence:

>687_bases
ATGACGAGCGGCATATCCAGCCTGACCAGCACGACGAAAACCACGGGCTCGTCGACGAGCAGCAGCGGCAACGCCACCGA
GATCGCCAGCAACTTCACGCAGTTCCTCACGCTGCTGACCACGCAGCTCAAGAACCAGAACCCCCTCGACCCGATGGACA
CCAACCAGTTCACGCAGCAGCTGGTGCAGTTCGCCGGCGTCGAGCAGCAGCTGAAGACCAACGACCGCCTCGACAGCATC
CTGAGCGCCTCGCAGTCGGCGAGCTCGGCCTCGGCCACGAGCTACATCGGGAAGACCGTGTCGGCGGACGGCAGCGCCTC
GCAGCTGTCCGGCGGCTCCGCCTCCTGGACGCTGAACCCGGCCCGGGCCGCCTCGAAGGCGGTAATCACGGTCCTGGACT
CGAAGAACAACGTCGTGGCCACGCAGACCACCGCCCTCAGCGCCGGCAGCCAGACCTACACGTGGAACGGCAAGACCTCG
GCCGGCCTGACCGCGCCCGACGGGAACTACTCGATCAAGGTGGCGGCCACGGACGCCACCGGCTCGAGCGTCGCGGTCGA
TACGAGCCTGACGGGGGCCGTCGATGAGGTCGATCTCAGCGGAACGTCGCCGGTGCTGGTGATCGGCTCGCAGAGAGTGC
CGCTGTCCAGCGTGCAGACCATCGGGTTGTCCACAAGTGGCACTTAA

Upstream 100 bases:

>100_bases
TCTAGGCGGGGCGCAGGGCGCCCGCATCGCGGACCGACACGGACACCGACACAGCGCGCATCCGGCCCCTGCGCCAGGAC
GCGGCACGGGAGAGATCAGC

Downstream 100 bases:

>100_bases
CGAATCACATCCGAGTGACTCGCTTCAACATCTCTTAAGCGGGCACAAGTACCTTCAATGCTCGACAGGTCAGTCGAGTG
TAGAGCGTATCATGACCGAA

Product: flagellar hook capping protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTSGISSLTSTTKTTGSSTSSSGNATEIASNFTQFLTLLTTQLKNQNPLDPMDTNQFTQQLVQFAGVEQQLKTNDRLDSI
LSASQSASSASATSYIGKTVSADGSASQLSGGSASWTLNPARAASKAVITVLDSKNNVVATQTTALSAGSQTYTWNGKTS
AGLTAPDGNYSIKVAATDATGSSVAVDTSLTGAVDEVDLSGTSPVLVIGSQRVPLSSVQTIGLSTSGT

Sequences:

>Translated_228_residues
MTSGISSLTSTTKTTGSSTSSSGNATEIASNFTQFLTLLTTQLKNQNPLDPMDTNQFTQQLVQFAGVEQQLKTNDRLDSI
LSASQSASSASATSYIGKTVSADGSASQLSGGSASWTLNPARAASKAVITVLDSKNNVVATQTTALSAGSQTYTWNGKTS
AGLTAPDGNYSIKVAATDATGSSVAVDTSLTGAVDEVDLSGTSPVLVIGSQRVPLSSVQTIGLSTSGT
>Mature_227_residues
TSGISSLTSTTKTTGSSTSSSGNATEIASNFTQFLTLLTTQLKNQNPLDPMDTNQFTQQLVQFAGVEQQLKTNDRLDSIL
SASQSASSASATSYIGKTVSADGSASQLSGGSASWTLNPARAASKAVITVLDSKNNVVATQTTALSAGSQTYTWNGKTSA
GLTAPDGNYSIKVAATDATGSSVAVDTSLTGAVDEVDLSGTSPVLVIGSQRVPLSSVQTIGLSTSGT

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=154, Percent_Identity=34.4155844155844, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 23046; Mature: 22915

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGISSLTSTTKTTGSSTSSSGNATEIASNFTQFLTLLTTQLKNQNPLDPMDTNQFTQQ
CCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LVQFAGVEQQLKTNDRLDSILSASQSASSASATSYIGKTVSADGSASQLSGGSASWTLNP
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEECCCCCHHHCCCCCCEEEECH
ARAASKAVITVLDSKNNVVATQTTALSAGSQTYTWNGKTSAGLTAPDGNYSIKVAATDAT
HHHCCCEEEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCEECCCCCEEEEEEEECCC
GSSVAVDTSLTGAVDEVDLSGTSPVLVIGSQRVPLSSVQTIGLSTSGT
CCEEEEECCCCCCCCEEECCCCCCEEEECCCCCCHHHHEEECCCCCCC
>Mature Secondary Structure 
TSGISSLTSTTKTTGSSTSSSGNATEIASNFTQFLTLLTTQLKNQNPLDPMDTNQFTQQ
CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LVQFAGVEQQLKTNDRLDSILSASQSASSASATSYIGKTVSADGSASQLSGGSASWTLNP
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEECCCCCHHHCCCCCCEEEECH
ARAASKAVITVLDSKNNVVATQTTALSAGSQTYTWNGKTSAGLTAPDGNYSIKVAATDAT
HHHCCCEEEEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCEECCCCCEEEEEEEECCC
GSSVAVDTSLTGAVDEVDLSGTSPVLVIGSQRVPLSSVQTIGLSTSGT
CCEEEEECCCCCCCCEEECCCCCCEEEECCCCCCHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]