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The map label for this gene is fliN [H]

Identifier: 170751437

GI number: 170751437

Start: 5371272

End: 5371604

Strand: Reverse

Name: fliN [H]

Synonym: Mrad2831_5056

Alternate gene names: 170751437

Gene position: 5371604-5371272 (Counterclockwise)

Preceding gene: 170751438

Following gene: 170751436

Centisome position: 88.38

GC content: 69.97

Gene sequence:

>333_bases
ATGTCCGACGATTTCAGCCTGCCCCAGCTCGGCGAGCACGACACCGACTACGCGGCGGGCTCAATCCGCGACGCGCCCAC
CACGCCGAAGACGGCGGCCGACCTGGAGCAGCTCTTCGACGTGCCCGTGATGGTCTCGGCGGTGCTGGGCTCCGCCCGGA
TGCCGATCGGCGACCTGCTCCGGCTCGCGCCCGGCGCGGTGCTCGAACTCGACCGGAAGGTCGGCGAGGCGATCGACGTG
TTCGTCAACAACCGGCTGGTCGCCCGCGGCGAGGTCGTCCTCGTCGAGGACCGCCTCGGCGTGACGATGACCGAGATCGT
CAAGGGTGAGTGA

Upstream 100 bases:

>100_bases
ATCGAGTGGGCGGACGGCGGCATCGTGCGGGAGCGCGCCCGCATCGAGGCGGCGGTGCTCGACGCCCTCGGCCTGCCGAC
GAGCCCGTGAGGAGATCCTG

Downstream 100 bases:

>100_bases
TTGTTCGGTGCGGATGCCGGGGGGCTGTCCGCGCCCGGGTTTTGAGAGGGACGAACCATGCGGCTCCTGATGATCGGGCG
GCTCAACGGCGAGCTGATCA

Product: flagellar motor switch protein FliN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSDDFSLPQLGEHDTDYAAGSIRDAPTTPKTAADLEQLFDVPVMVSAVLGSARMPIGDLLRLAPGAVLELDRKVGEAIDV
FVNNRLVARGEVVLVEDRLGVTMTEIVKGE

Sequences:

>Translated_110_residues
MSDDFSLPQLGEHDTDYAAGSIRDAPTTPKTAADLEQLFDVPVMVSAVLGSARMPIGDLLRLAPGAVLELDRKVGEAIDV
FVNNRLVARGEVVLVEDRLGVTMTEIVKGE
>Mature_109_residues
SDDFSLPQLGEHDTDYAAGSIRDAPTTPKTAADLEQLFDVPVMVSAVLGSARMPIGDLLRLAPGAVLELDRKVGEAIDVF
VNNRLVARGEVVLVEDRLGVTMTEIVKGE

Specific function: FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliN/MopA/SpaO family [H]

Homologues:

Organism=Escherichia coli, GI1788256, Length=77, Percent_Identity=44.1558441558442, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012826
- InterPro:   IPR001172
- InterPro:   IPR001543 [H]

Pfam domain/function: PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 11778; Mature: 11646

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDFSLPQLGEHDTDYAAGSIRDAPTTPKTAADLEQLFDVPVMVSAVLGSARMPIGDLL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHH
RLAPGAVLELDRKVGEAIDVFVNNRLVARGEVVLVEDRLGVTMTEIVKGE
HHCCCHHHHHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCCHHHHHCCC
>Mature Secondary Structure 
SDDFSLPQLGEHDTDYAAGSIRDAPTTPKTAADLEQLFDVPVMVSAVLGSARMPIGDLL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHH
RLAPGAVLELDRKVGEAIDVFVNNRLVARGEVVLVEDRLGVTMTEIVKGE
HHCCCHHHHHHHHHHHHHHHHHCCEEECCCCEEEEECCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8002583; 11259647; 2315326; 1732219 [H]