| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751340
Identifier: 170751340
GI number: 170751340
Start: 5282255
End: 5283346
Strand: Reverse
Name: 170751340
Synonym: Mrad2831_4958
Alternate gene names: NA
Gene position: 5283346-5282255 (Counterclockwise)
Preceding gene: 170751344
Following gene: 170751339
Centisome position: 86.93
GC content: 72.99
Gene sequence:
>1092_bases ATGGTCGGTGAGCCACCAGGGTCCGGCGCGGAAGACTCGCCGGGCAACGGCCCCGCGGGGAACCCGGGTCGGGGTCCGGC ACAGGGTACCGCGGAAGCCGCCGCCCTGAGCGACAGCTTCAAGCGATTCGCCGACGTCGTGCCGCTGATGATGTGGCGCT CGGACGAGGCCGGCCACGCGATCCACCACAACGAGTGCTGGCTGGAATTCACCGGCCGCCCCCTGGAGGCGGAGCTCGGC CTCGGCTGGCGCAGCGGGCTGCATCCCGAGGATTTCGAGCGCCACGCCCGGATCGTCGCCGAGGCCTTCGCGACGCGGGC GCCGTTCACCGTCGAGTTCCGCCTGCGGCGGCACGACGGCGAGTACCGCTGGCTCCTCGACACGGCCCGCCCGCTCGTCG AGGACGGCCGGTTCCAGGGCTATCTCGGCTCCTGCTTCGACATCACCGACCGCAAGCACGCGGAGGAGCATATCGAGCAC GCGCTGGCCGAGAAGGAGGCGCTGCTGGCCGAGGTCTATCACCGGGTCCGTAACAACCTCCAGGTGATGGTCAGCCTGAT CGGCCTCTACGGGCGGGCGGCCCCGGACGCCTGCCGCGGCAGCTTCGAGGCGCTGGGCCAGCGGGTCCGGGCGATCGCGC TGGTGCAGCAGCACCTGCACGAGGCGCCGCACATCGCGTCGATCGACCTCAAGGACTACCTGCACCGCCTCGCCTCGGGG CTCGGGCAGCTCCGGCGCGCCGGGCGGATCGGCGTCCAGGTCGGCGGCTCCGGGAACGGCCTCGTGGAGCCGCGCACCGC CAACGCACTGGGCATGATCGTCGCGGAGATCGTGGCCGAGTGCCTCGACGCCACCGCCGAGCACGTCGCCTGCTCCATCG CCATCGACATCGAGGCCGGCGCGCCCCTGCGGCTCGCGATCGTCTCGGGGGTGAGCGACATGGCCGAGTCCGGACGGCCG AACGTCCCGAAGCTCGGCCCCCGCCTCATCGCCGCCTACGCGGCGCAGGCGGAGATCACCGTGGCGGGCGATGCCAGCCC GGGCGATCCCCTGTGGCTGACCCTGCCGCCGGCGCGGCCCGGCGCGCAATGA
Upstream 100 bases:
>100_bases GTTCAGGACCGGAACGGCCGTCCGGTCGACACGTTGACCGGCGCCATCCGCACGCAGGCGTCGCCTTTCACGCAGTTCGT CAGAGTGAATCGGGTACAGA
Downstream 100 bases:
>100_bases GCGCCCGCGGCGCCGGACCCCGTCGCCACGGCGGCGCGGCCGGCCTATAGCGGCGCAGACCTCTCCGGACCCGGCCGAGC ATGCTTCCTCCGATCGACAC
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MVGEPPGSGAEDSPGNGPAGNPGRGPAQGTAEAAALSDSFKRFADVVPLMMWRSDEAGHAIHHNECWLEFTGRPLEAELG LGWRSGLHPEDFERHARIVAEAFATRAPFTVEFRLRRHDGEYRWLLDTARPLVEDGRFQGYLGSCFDITDRKHAEEHIEH ALAEKEALLAEVYHRVRNNLQVMVSLIGLYGRAAPDACRGSFEALGQRVRAIALVQQHLHEAPHIASIDLKDYLHRLASG LGQLRRAGRIGVQVGGSGNGLVEPRTANALGMIVAEIVAECLDATAEHVACSIAIDIEAGAPLRLAIVSGVSDMAESGRP NVPKLGPRLIAAYAAQAEITVAGDASPGDPLWLTLPPARPGAQ
Sequences:
>Translated_363_residues MVGEPPGSGAEDSPGNGPAGNPGRGPAQGTAEAAALSDSFKRFADVVPLMMWRSDEAGHAIHHNECWLEFTGRPLEAELG LGWRSGLHPEDFERHARIVAEAFATRAPFTVEFRLRRHDGEYRWLLDTARPLVEDGRFQGYLGSCFDITDRKHAEEHIEH ALAEKEALLAEVYHRVRNNLQVMVSLIGLYGRAAPDACRGSFEALGQRVRAIALVQQHLHEAPHIASIDLKDYLHRLASG LGQLRRAGRIGVQVGGSGNGLVEPRTANALGMIVAEIVAECLDATAEHVACSIAIDIEAGAPLRLAIVSGVSDMAESGRP NVPKLGPRLIAAYAAQAEITVAGDASPGDPLWLTLPPARPGAQ >Mature_363_residues MVGEPPGSGAEDSPGNGPAGNPGRGPAQGTAEAAALSDSFKRFADVVPLMMWRSDEAGHAIHHNECWLEFTGRPLEAELG LGWRSGLHPEDFERHARIVAEAFATRAPFTVEFRLRRHDGEYRWLLDTARPLVEDGRFQGYLGSCFDITDRKHAEEHIEH ALAEKEALLAEVYHRVRNNLQVMVSLIGLYGRAAPDACRGSFEALGQRVRAIALVQQHLHEAPHIASIDLKDYLHRLASG LGQLRRAGRIGVQVGGSGNGLVEPRTANALGMIVAEIVAECLDATAEHVACSIAIDIEAGAPLRLAIVSGVSDMAESGRP NVPKLGPRLIAAYAAQAEITVAGDASPGDPLWLTLPPARPGAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR001633 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013656 - InterPro: IPR013655 [H]
Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF08447 PAS_3; PF08448 PAS_4 [H]
EC number: NA
Molecular weight: Translated: 38935; Mature: 38935
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS50113 PAC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGEPPGSGAEDSPGNGPAGNPGRGPAQGTAEAAALSDSFKRFADVVPLMMWRSDEAGHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE IHHNECWLEFTGRPLEAELGLGWRSGLHPEDFERHARIVAEAFATRAPFTVEFRLRRHDG EECCCEEEEECCCCCCHHCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC EYRWLLDTARPLVEDGRFQGYLGSCFDITDRKHAEEHIEHALAEKEALLAEVYHRVRNNL CEEEEHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVMVSLIGLYGRAAPDACRGSFEALGQRVRAIALVQQHLHEAPHIASIDLKDYLHRLASG HHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHH LGQLRRAGRIGVQVGGSGNGLVEPRTANALGMIVAEIVAECLDATAEHVACSIAIDIEAG HHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCC APLRLAIVSGVSDMAESGRPNVPKLGPRLIAAYAAQAEITVAGDASPGDPLWLTLPPARP CCEEEHHHHCHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCCC GAQ CCC >Mature Secondary Structure MVGEPPGSGAEDSPGNGPAGNPGRGPAQGTAEAAALSDSFKRFADVVPLMMWRSDEAGHA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE IHHNECWLEFTGRPLEAELGLGWRSGLHPEDFERHARIVAEAFATRAPFTVEFRLRRHDG EECCCEEEEECCCCCCHHCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCC EYRWLLDTARPLVEDGRFQGYLGSCFDITDRKHAEEHIEHALAEKEALLAEVYHRVRNNL CEEEEHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVMVSLIGLYGRAAPDACRGSFEALGQRVRAIALVQQHLHEAPHIASIDLKDYLHRLASG HHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHH LGQLRRAGRIGVQVGGSGNGLVEPRTANALGMIVAEIVAECLDATAEHVACSIAIDIEAG HHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCC APLRLAIVSGVSDMAESGRPNVPKLGPRLIAAYAAQAEITVAGDASPGDPLWLTLPPARP CCEEEHHHHCHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCEEEECCCCCC GAQ CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]