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The map label for this gene is lumQ [H]

Identifier: 170751254

GI number: 170751254

Start: 5203208

End: 5204134

Strand: Reverse

Name: lumQ [H]

Synonym: Mrad2831_4871

Alternate gene names: 170751254

Gene position: 5204134-5203208 (Counterclockwise)

Preceding gene: 170751255

Following gene: 170751251

Centisome position: 85.62

GC content: 74.11

Gene sequence:

>927_bases
ATGGACGACACAGCCGAGAGTTCGCCCGAGAATTCGGCCGCGACCACCGACGGGACGTTCGCGTACGCCACGAGCGGCAG
CACCGGGCATCTCTCCGGCCGTCCCGAGCTGACCTGCTACGCGCCGAGCGACCGCGGCCTCCCGGAGATCACCTTCATCG
ATTTCCGCTTCCCCGTCGGCGGGTGGAGCACGCACGCGGTCACCGGCCTCGAGGTCGCGGCCAGCACGCAGCCCGCCGGG
GCGCACCACGCGGTCGATTACGAGATCGCGGCGCGGCTGAGCGAGCGCGAGGGCCTGCTGGTCCGGCGTCCGGGCCTGAA
CGGCACGACCCGGTGGGTGGGTCCGTATGCCGGCCGGGTCCTCTCCTTCTCGGCCGCGGCCGTCGAGCGGCTCGCCGAGG
CGCCGGTCGGCAAGATCGCCTTCGCCGCGGACGGGCGCGATCTCCGCGCCTGCCGCAGCACCTGTCACATCCTCGACGCG
CTGGCTTGCGCGCACCGGGACGACCCGTCGCCCGACCCGCTGCTCATCGAGAGTCTCCATCTGGCCGTCCTGCGCTCGGT
CGTCGCCGCGCGCGCGCCGGGCCGGTCGGCGGCGCCCGACCTCTCGGCGTCGCAGGCCGGACGGGCCTGCGCGTATATCC
GGGAGCACCTGGACCGGGAGATCACCGTCTCTGCCCTGGCCGGCATCGTCGGGCTCAGCGAGGGCTACTTCATCCGGGCC
TTCCGCCAGACCACCGGGGTCACGCCCTACCAGTACATCATGCGCGAGCGCGTCGGCCGGGCCGAGGCCCTGATCCGCTC
CGGCGCGGGATCGATGGCGGAGGTCGCCGCGCGATCGGGCTTCACGAGCGCCGGCGCCATGAGCCGCACGTTCCGGAAGC
TCGTCGGGCGCTCGCCGACCGGGCGCACGGCGGTCCGGCGCGCCTGA

Upstream 100 bases:

>100_bases
GGATCCCTGCGCTGACGGTCTGACACCGGGAGGGCGGCCGCGGGGCCGCCCTCCTCCGTCGTGGGGAAGACCGCGACGAT
ACCGGGATCGATGGGCCCGC

Downstream 100 bases:

>100_bases
GGCTCTGGAGCCGCTCACGATCGCTCAGGCAACGGTCTGGAACACGGGCATCTCCGGTTCGGACGGCCGCGCCACGAACC
CCTCTCCCGCAACGGGAGAG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MDDTAESSPENSAATTDGTFAYATSGSTGHLSGRPELTCYAPSDRGLPEITFIDFRFPVGGWSTHAVTGLEVAASTQPAG
AHHAVDYEIAARLSEREGLLVRRPGLNGTTRWVGPYAGRVLSFSAAAVERLAEAPVGKIAFAADGRDLRACRSTCHILDA
LACAHRDDPSPDPLLIESLHLAVLRSVVAARAPGRSAAPDLSASQAGRACAYIREHLDREITVSALAGIVGLSEGYFIRA
FRQTTGVTPYQYIMRERVGRAEALIRSGAGSMAEVAARSGFTSAGAMSRTFRKLVGRSPTGRTAVRRA

Sequences:

>Translated_308_residues
MDDTAESSPENSAATTDGTFAYATSGSTGHLSGRPELTCYAPSDRGLPEITFIDFRFPVGGWSTHAVTGLEVAASTQPAG
AHHAVDYEIAARLSEREGLLVRRPGLNGTTRWVGPYAGRVLSFSAAAVERLAEAPVGKIAFAADGRDLRACRSTCHILDA
LACAHRDDPSPDPLLIESLHLAVLRSVVAARAPGRSAAPDLSASQAGRACAYIREHLDREITVSALAGIVGLSEGYFIRA
FRQTTGVTPYQYIMRERVGRAEALIRSGAGSMAEVAARSGFTSAGAMSRTFRKLVGRSPTGRTAVRRA
>Mature_308_residues
MDDTAESSPENSAATTDGTFAYATSGSTGHLSGRPELTCYAPSDRGLPEITFIDFRFPVGGWSTHAVTGLEVAASTQPAG
AHHAVDYEIAARLSEREGLLVRRPGLNGTTRWVGPYAGRVLSFSAAAVERLAEAPVGKIAFAADGRDLRACRSTCHILDA
LACAHRDDPSPDPLLIESLHLAVLRSVVAARAPGRSAAPDLSASQAGRACAYIREHLDREITVSALAGIVGLSEGYFIRA
FRQTTGVTPYQYIMRERVGRAEALIRSGAGSMAEVAARSGFTSAGAMSRTFRKLVGRSPTGRTAVRRA

Specific function: Probable transcriptional regulator. Its target gene(s) is not yet known [H]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 32558; Mature: 32558

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTAESSPENSAATTDGTFAYATSGSTGHLSGRPELTCYAPSDRGLPEITFIDFRFPVG
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCC
GWSTHAVTGLEVAASTQPAGAHHAVDYEIAARLSEREGLLVRRPGLNGTTRWVGPYAGRV
CCCCHHEECEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEECCHHHHHH
LSFSAAAVERLAEAPVGKIAFAADGRDLRACRSTCHILDALACAHRDDPSPDPLLIESLH
HHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LAVLRSVVAARAPGRSAAPDLSASQAGRACAYIREHLDREITVSALAGIVGLSEGYFIRA
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE
FRQTTGVTPYQYIMRERVGRAEALIRSGAGSMAEVAARSGFTSAGAMSRTFRKLVGRSPT
EHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
GRTAVRRA
CCHHHCCC
>Mature Secondary Structure
MDDTAESSPENSAATTDGTFAYATSGSTGHLSGRPELTCYAPSDRGLPEITFIDFRFPVG
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCC
GWSTHAVTGLEVAASTQPAGAHHAVDYEIAARLSEREGLLVRRPGLNGTTRWVGPYAGRV
CCCCHHEECEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEECCHHHHHH
LSFSAAAVERLAEAPVGKIAFAADGRDLRACRSTCHILDALACAHRDDPSPDPLLIESLH
HHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
LAVLRSVVAARAPGRSAAPDLSASQAGRACAYIREHLDREITVSALAGIVGLSEGYFIRA
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEE
FRQTTGVTPYQYIMRERVGRAEALIRSGAGSMAEVAARSGFTSAGAMSRTFRKLVGRSPT
EHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
GRTAVRRA
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7503752 [H]