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The map label for this gene is yfdE [H]

Identifier: 170751249

GI number: 170751249

Start: 5196879

End: 5198327

Strand: Reverse

Name: yfdE [H]

Synonym: Mrad2831_4866

Alternate gene names: 170751249

Gene position: 5198327-5196879 (Counterclockwise)

Preceding gene: 170751251

Following gene: 170751248

Centisome position: 85.53

GC content: 77.36

Gene sequence:

>1449_bases
ATGCGCGAACGACATGCCGACCACGACGCCCTGCCGCCGATCCTCGCCGAGGCGCTGGCGGCCCTGGCGCTCCCGCCCGA
GGCCGGGAACCGGCTGACGGTGACCGGCACCGGGAGCCTGCCCTCCTGCTTCCCGGTCACGGCGCTGGCGACGGCGTCGA
TCGCGGCCGCCGGCCTCGCCGTCTCCGAACTCCTCGGCCTGTCCGGACGCGCGCCCGCCGTCACGGTCGACCGGCACCTG
GCCTCGGCGTGGTTCGGCACCTCGGTGCGGCCGCAGGGCTGGACGCTGCCGGCCGCCTGGGACCCGATCGCCGGCGACTA
CCGGACGGCGGACGGCTGGATCCGCCTGCACACCAACGCACCCCGTCACCGCGCGGCCGCCCTCGCGGTGCTCGACTGTC
CGGGCCAGCGGGAGGCGGTCGCGTCGGTGGTCGCCCGGGCGGCGGCGGAAGGCCTGGAATCCGCCATCCTGCGCGCGGGG
GGCTGCGCCGCGGCGATGCGCGGTCTCGACGAGTGGCCGAGGCTCGATCAGGGCCGGGCGGTCCGGGGCGAGCCGCTCGT
CGCGGTCGCGGACCGGCCCGTCCAGCACCGCGCGCCCTGGCGCCCGGACCCGGACCGGCCCCTCGCGGGGATCCGGGTCC
TCGACCTGACCCGCATCCTGGCGGGACCGGTGGCCACGCGCTTCCTGGCCGGTCTGGGCGCCGACGTCCTGCGGATCGAC
CCGCCCGGCTGGGACGAGCCGTCCCTGGCGCCCGACGTCACCCTGGGCAAGGTCTGCACGCGGCTCGACCTCCGGCAGGC
CGCCGACCGCCGGCACTTCGAGACCCTGCTCGCCGAGGCCGACATCCTCGTGCACGGGTACCGCCCGGACGCCCTGGAGC
GGCTCGGCTACGGCGCGGCGCGGCGGCGGACGCTCAACCCGGACCTGATCGACGTCGCGCTCTGCGCCTACGGCTGGGCC
GGGCCCTGGGCCGGACGGCGCGGCTTCGACAGCCTCGTCCAGATGGCGGCGGGCATCGCGGCGGCCGGGCAGCGGTGGAT
GCGGGCCGAGCGGCCGGTGCCGCTGCCCGTCCAGGCGCTCGACCACGCCACCGGCTACCTGATGGCGGCGGCCTCCATCC
GCGGCCTGATCGCCCGGCGGAGCGAGGGGCGCGCCGTCACCGCCCGGCTCTCCCTGGCCCGGACCGCGTGCCTGCTCACG
GATCATCCCGGCAGCGCGCCGGGGCCCGCCTTCGGCGGATATCGCGACCGCGATTACGCCCCGCAGATGGAGCACACGGC
GTGGGGACCGGCCCTGCGGCTGCACCCCCCGGTGCGGATCGGCGGCGCGCCTCTGCGCTGGGATCACCCGGCCGGCCCAC
TCGGCGCGACGGACGCGGCGCAAGTCCGGACGTTCGATAGCGCACGATTGTCCGGCTCGATCCGCCATCTCGGGGAGCAG
AAGCGCTAG

Upstream 100 bases:

>100_bases
CGGCGCGGTCCAGCCAGTCCGTCATGTTGATCAGATGTATCAAGATTGATCGGTCCGTCGACGGCCGGCAGCGTGCGCGA
ACCACCCGAGGGCCGCGACC

Downstream 100 bases:

>100_bases
AAATTGACCAATCCTGGGAATGTTTTTGCAGCCGCCGCGCCGGCGAACGCTTGACACCGATCTATGTTATCTGGCAATCC
GCATTCATGATTTGAAATCC

Product: CoA transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MRERHADHDALPPILAEALAALALPPEAGNRLTVTGTGSLPSCFPVTALATASIAAAGLAVSELLGLSGRAPAVTVDRHL
ASAWFGTSVRPQGWTLPAAWDPIAGDYRTADGWIRLHTNAPRHRAAALAVLDCPGQREAVASVVARAAAEGLESAILRAG
GCAAAMRGLDEWPRLDQGRAVRGEPLVAVADRPVQHRAPWRPDPDRPLAGIRVLDLTRILAGPVATRFLAGLGADVLRID
PPGWDEPSLAPDVTLGKVCTRLDLRQAADRRHFETLLAEADILVHGYRPDALERLGYGAARRRTLNPDLIDVALCAYGWA
GPWAGRRGFDSLVQMAAGIAAAGQRWMRAERPVPLPVQALDHATGYLMAAASIRGLIARRSEGRAVTARLSLARTACLLT
DHPGSAPGPAFGGYRDRDYAPQMEHTAWGPALRLHPPVRIGGAPLRWDHPAGPLGATDAAQVRTFDSARLSGSIRHLGEQ
KR

Sequences:

>Translated_482_residues
MRERHADHDALPPILAEALAALALPPEAGNRLTVTGTGSLPSCFPVTALATASIAAAGLAVSELLGLSGRAPAVTVDRHL
ASAWFGTSVRPQGWTLPAAWDPIAGDYRTADGWIRLHTNAPRHRAAALAVLDCPGQREAVASVVARAAAEGLESAILRAG
GCAAAMRGLDEWPRLDQGRAVRGEPLVAVADRPVQHRAPWRPDPDRPLAGIRVLDLTRILAGPVATRFLAGLGADVLRID
PPGWDEPSLAPDVTLGKVCTRLDLRQAADRRHFETLLAEADILVHGYRPDALERLGYGAARRRTLNPDLIDVALCAYGWA
GPWAGRRGFDSLVQMAAGIAAAGQRWMRAERPVPLPVQALDHATGYLMAAASIRGLIARRSEGRAVTARLSLARTACLLT
DHPGSAPGPAFGGYRDRDYAPQMEHTAWGPALRLHPPVRIGGAPLRWDHPAGPLGATDAAQVRTFDSARLSGSIRHLGEQ
KR
>Mature_482_residues
MRERHADHDALPPILAEALAALALPPEAGNRLTVTGTGSLPSCFPVTALATASIAAAGLAVSELLGLSGRAPAVTVDRHL
ASAWFGTSVRPQGWTLPAAWDPIAGDYRTADGWIRLHTNAPRHRAAALAVLDCPGQREAVASVVARAAAEGLESAILRAG
GCAAAMRGLDEWPRLDQGRAVRGEPLVAVADRPVQHRAPWRPDPDRPLAGIRVLDLTRILAGPVATRFLAGLGADVLRID
PPGWDEPSLAPDVTLGKVCTRLDLRQAADRRHFETLLAEADILVHGYRPDALERLGYGAARRRTLNPDLIDVALCAYGWA
GPWAGRRGFDSLVQMAAGIAAAGQRWMRAERPVPLPVQALDHATGYLMAAASIRGLIARRSEGRAVTARLSLARTACLLT
DHPGSAPGPAFGGYRDRDYAPQMEHTAWGPALRLHPPVRIGGAPLRWDHPAGPLGATDAAQVRTFDSARLSGSIRHLGEQ
KR

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=224, Percent_Identity=29.4642857142857, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI300863124, Length=224, Percent_Identity=29.4642857142857, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI300863126, Length=209, Percent_Identity=26.7942583732057, Blast_Score=84, Evalue=4e-16,
Organism=Escherichia coli, GI87082093, Length=145, Percent_Identity=31.7241379310345, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1788717, Length=153, Percent_Identity=30.0653594771242, Blast_Score=82, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI32564160, Length=178, Percent_Identity=29.7752808988764, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24648431, Length=217, Percent_Identity=31.7972350230415, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24585488, Length=192, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 51253; Mature: 51253

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERHADHDALPPILAEALAALALPPEAGNRLTVTGTGSLPSCFPVTALATASIAAAGLA
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
VSELLGLSGRAPAVTVDRHLASAWFGTSVRPQGWTLPAAWDPIAGDYRTADGWIRLHTNA
HHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
PRHRAAALAVLDCPGQREAVASVVARAAAEGLESAILRAGGCAAAMRGLDEWPRLDQGRA
CCHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHCCCCCCCCC
VRGEPLVAVADRPVQHRAPWRPDPDRPLAGIRVLDLTRILAGPVATRFLAGLGADVLRID
CCCCCEEEECCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PPGWDEPSLAPDVTLGKVCTRLDLRQAADRRHFETLLAEADILVHGYRPDALERLGYGAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCHH
RRRTLNPDLIDVALCAYGWAGPWAGRRGFDSLVQMAAGIAAAGQRWMRAERPVPLPVQAL
HCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
DHATGYLMAAASIRGLIARRSEGRAVTARLSLARTACLLTDHPGSAPGPAFGGYRDRDYA
HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCC
PQMEHTAWGPALRLHPPVRIGGAPLRWDHPAGPLGATDAAQVRTFDSARLSGSIRHLGEQ
CCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCCCCHHHHEECHHHHHHHHHHHHCCC
KR
CC
>Mature Secondary Structure
MRERHADHDALPPILAEALAALALPPEAGNRLTVTGTGSLPSCFPVTALATASIAAAGLA
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
VSELLGLSGRAPAVTVDRHLASAWFGTSVRPQGWTLPAAWDPIAGDYRTADGWIRLHTNA
HHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
PRHRAAALAVLDCPGQREAVASVVARAAAEGLESAILRAGGCAAAMRGLDEWPRLDQGRA
CCHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHCCCCCCCCC
VRGEPLVAVADRPVQHRAPWRPDPDRPLAGIRVLDLTRILAGPVATRFLAGLGADVLRID
CCCCCEEEECCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PPGWDEPSLAPDVTLGKVCTRLDLRQAADRRHFETLLAEADILVHGYRPDALERLGYGAA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCHH
RRRTLNPDLIDVALCAYGWAGPWAGRRGFDSLVQMAAGIAAAGQRWMRAERPVPLPVQAL
HCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
DHATGYLMAAASIRGLIARRSEGRAVTARLSLARTACLLTDHPGSAPGPAFGGYRDRDYA
HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCC
PQMEHTAWGPALRLHPPVRIGGAPLRWDHPAGPLGATDAAQVRTFDSARLSGSIRHLGEQ
CCCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCCCCHHHHEECHHHHHHHHHHHHCCC
KR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]