Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170748729

Identifier: 170748729

GI number: 170748729

Start: 2447597

End: 2448721

Strand: Reverse

Name: 170748729

Synonym: Mrad2831_2311

Alternate gene names: NA

Gene position: 2448721-2447597 (Counterclockwise)

Preceding gene: 170748733

Following gene: 170748728

Centisome position: 40.29

GC content: 74.22

Gene sequence:

>1125_bases
ATGAACGCGGGCGCAGCCACGGGAGCCGCCGAGTCGAGCGCGGACGGCCGATCCGGCATTCTGCCGGCCCAGGCGATCGC
CGCCCTGGCCCAGGCGGGCGGCATCCGGACCGCGAGCCCCTTCGCCCCCGACCAGATCCAGCCCGCGAGCCTCGACCTGC
GCCTCGGCGCCAAGGCCTACCGGGTTCGGACGAGCTTCCTGCCCGGCTCGGGACGGACGGTCCAGGCCTGCGTCGACCGG
CTGTCGCTGCACGCCGTCGACCTGCGCCCGGGCGCCGTCCTGGAGACGGGCTGCGTCTACATCGCGGAGCTCCAGGAGAG
CCTCGCCCTGCCGGCCGATCTCGCGGCGGCCGCGAACCCGAAGAGCTCGACCGGGCGCATCGACGTCTTCACCCGCGTGA
TCACCGACCGCGGCGAGGCCTTCGACCAGGTCGAGCCCGGCTACGACGGGCCGCTCTACGCGGAGATCTCGCCGCGCACC
TTCCCGGTCCTCGTGCGCAGCGGCTCGCGGCTGTCGCAGATCCGCTTCCGCCGCGGGGCGCCGCGGCTGACCGAGGTCGA
GCTCGGCCTGCTGCACGCCCGCTCGGCCCTGGTCGACGCCGGCAGCCCGTCCTTCCAGGGCGGCGTCGCGGTCTCGGTGG
ACCTCGCCGGCTTCGACGGCCTCGTGGGTTACCGGGCGAAGCGCCACACCGGCCTCGTCGACGTGGACGCCCCCGGCCGC
CACCGGGCCGCGGATTTCTGGGAGCCCCTCGCCGCCGACGGGTCGGGCAGCCTGATCCTCGACCCCGGCCAGTTCTACAT
CCTGGCCTCGAAGGAGGCCGTGCAGGTCCCGCCGGACCACGCCGCCGAGATGGTGCCGTTCGATCCTCTGGTGGGCGAGT
TCCGGGTCCACTACGCGGGCTTCTTCGACCCGGGCTTCGGCTATGCCGGGGCGGGCGGGGCGGGCGCGCGGGCCGTGCTG
GAGGTCCGCTCCCGCGACGTGCCGTTCCTCCTGGAGGACGGGCAGATCGTCGGCCGCCTCGTCTACGAGCGGATGCTCGA
CCTGCCGGAGACGCTCTACGGGGCCGGGGCCGGCTCGAACTACCAGGCCCAGGGGCTCAAGCTCTCGAAGCATTTCGCCC
TGTAG

Upstream 100 bases:

>100_bases
GCCTGCGGAAGCGGTTAAGCCCGCGTTAGCGGGTCCCGACGGACAACGCTGATCGGAGTGACGCGGACCGGCCGGGGCGC
GCGAAGGAGTCAGGGGCGCG

Downstream 100 bases:

>100_bases
TCCGGCCCGGACCCGCAGACGGGAGCAGCGATCGCATGGACGCCGTCGACCGGAAGATCCTCGATCTCCTCCAGCAGGAC
GCGACGCTCCCGGTGGCCGA

Product: 2'-deoxycytidine 5'-triphosphate deaminase

Products: dUTP; NH3

Alternate protein names: 2-Deoxycytidine 5-Triphosphate Deaminase; 2-Deoxycytidine 5'-Triphosphate Deaminase Superfamily; 2`-Deoxycytidine 5`-Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MNAGAATGAAESSADGRSGILPAQAIAALAQAGGIRTASPFAPDQIQPASLDLRLGAKAYRVRTSFLPGSGRTVQACVDR
LSLHAVDLRPGAVLETGCVYIAELQESLALPADLAAAANPKSSTGRIDVFTRVITDRGEAFDQVEPGYDGPLYAEISPRT
FPVLVRSGSRLSQIRFRRGAPRLTEVELGLLHARSALVDAGSPSFQGGVAVSVDLAGFDGLVGYRAKRHTGLVDVDAPGR
HRAADFWEPLAADGSGSLILDPGQFYILASKEAVQVPPDHAAEMVPFDPLVGEFRVHYAGFFDPGFGYAGAGGAGARAVL
EVRSRDVPFLLEDGQIVGRLVYERMLDLPETLYGAGAGSNYQAQGLKLSKHFAL

Sequences:

>Translated_374_residues
MNAGAATGAAESSADGRSGILPAQAIAALAQAGGIRTASPFAPDQIQPASLDLRLGAKAYRVRTSFLPGSGRTVQACVDR
LSLHAVDLRPGAVLETGCVYIAELQESLALPADLAAAANPKSSTGRIDVFTRVITDRGEAFDQVEPGYDGPLYAEISPRT
FPVLVRSGSRLSQIRFRRGAPRLTEVELGLLHARSALVDAGSPSFQGGVAVSVDLAGFDGLVGYRAKRHTGLVDVDAPGR
HRAADFWEPLAADGSGSLILDPGQFYILASKEAVQVPPDHAAEMVPFDPLVGEFRVHYAGFFDPGFGYAGAGGAGARAVL
EVRSRDVPFLLEDGQIVGRLVYERMLDLPETLYGAGAGSNYQAQGLKLSKHFAL
>Mature_374_residues
MNAGAATGAAESSADGRSGILPAQAIAALAQAGGIRTASPFAPDQIQPASLDLRLGAKAYRVRTSFLPGSGRTVQACVDR
LSLHAVDLRPGAVLETGCVYIAELQESLALPADLAAAANPKSSTGRIDVFTRVITDRGEAFDQVEPGYDGPLYAEISPRT
FPVLVRSGSRLSQIRFRRGAPRLTEVELGLLHARSALVDAGSPSFQGGVAVSVDLAGFDGLVGYRAKRHTGLVDVDAPGR
HRAADFWEPLAADGSGSLILDPGQFYILASKEAVQVPPDHAAEMVPFDPLVGEFRVHYAGFFDPGFGYAGAGGAGARAVL
EVRSRDVPFLLEDGQIVGRLVYERMLDLPETLYGAGAGSNYQAQGLKLSKHFAL

Specific function: Unknown

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.4.13

Molecular weight: Translated: 39296; Mature: 39296

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAGAATGAAESSADGRSGILPAQAIAALAQAGGIRTASPFAPDQIQPASLDLRLGAKAY
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCEEE
RVRTSFLPGSGRTVQACVDRLSLHAVDLRPGAVLETGCVYIAELQESLALPADLAAAANP
EEEEEECCCCCCCHHHHHHHHHEEEEECCCCCEECCCHHHHHHHHHHHCCCHHHHHCCCC
KSSTGRIDVFTRVITDRGEAFDQVEPGYDGPLYAEISPRTFPVLVRSGSRLSQIRFRRGA
CCCCCEEEEHHHHHHCCCCHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHCCC
PRLTEVELGLLHARSALVDAGSPSFQGGVAVSVDLAGFDGLVGYRAKRHTGLVDVDAPGR
CCCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHCCHHCCCCEEEECCCCC
HRAADFWEPLAADGSGSLILDPGQFYILASKEAVQVPPDHAAEMVPFDPLVGEFRVHYAG
CCCHHHHHHHCCCCCCCEEECCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEE
FFDPGFGYAGAGGAGARAVLEVRSRDVPFLLEDGQIVGRLVYERMLDLPETLYGAGAGSN
EECCCCCCCCCCCCCHHHHEEECCCCCCEEEECCHHHHHHHHHHHHCCCHHHHCCCCCCC
YQAQGLKLSKHFAL
CCCCCEEEHHCCCC
>Mature Secondary Structure
MNAGAATGAAESSADGRSGILPAQAIAALAQAGGIRTASPFAPDQIQPASLDLRLGAKAY
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCEEE
RVRTSFLPGSGRTVQACVDRLSLHAVDLRPGAVLETGCVYIAELQESLALPADLAAAANP
EEEEEECCCCCCCHHHHHHHHHEEEEECCCCCEECCCHHHHHHHHHHHCCCHHHHHCCCC
KSSTGRIDVFTRVITDRGEAFDQVEPGYDGPLYAEISPRTFPVLVRSGSRLSQIRFRRGA
CCCCCEEEEHHHHHHCCCCHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHCCC
PRLTEVELGLLHARSALVDAGSPSFQGGVAVSVDLAGFDGLVGYRAKRHTGLVDVDAPGR
CCCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHCCHHCCCCEEEECCCCC
HRAADFWEPLAADGSGSLILDPGQFYILASKEAVQVPPDHAAEMVPFDPLVGEFRVHYAG
CCCHHHHHHHCCCCCCCEEECCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEE
FFDPGFGYAGAGGAGARAVLEVRSRDVPFLLEDGQIVGRLVYERMLDLPETLYGAGAGSN
EECCCCCCCCCCCCCHHHHEEECCCCCCEEEECCHHHHHHHHHHHHCCCHHHHCCCCCCC
YQAQGLKLSKHFAL
CCCCCEEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dCTP; H2O

Specific reaction: dCTP + H2O = dUTP + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA