| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170748729
Identifier: 170748729
GI number: 170748729
Start: 2447597
End: 2448721
Strand: Reverse
Name: 170748729
Synonym: Mrad2831_2311
Alternate gene names: NA
Gene position: 2448721-2447597 (Counterclockwise)
Preceding gene: 170748733
Following gene: 170748728
Centisome position: 40.29
GC content: 74.22
Gene sequence:
>1125_bases ATGAACGCGGGCGCAGCCACGGGAGCCGCCGAGTCGAGCGCGGACGGCCGATCCGGCATTCTGCCGGCCCAGGCGATCGC CGCCCTGGCCCAGGCGGGCGGCATCCGGACCGCGAGCCCCTTCGCCCCCGACCAGATCCAGCCCGCGAGCCTCGACCTGC GCCTCGGCGCCAAGGCCTACCGGGTTCGGACGAGCTTCCTGCCCGGCTCGGGACGGACGGTCCAGGCCTGCGTCGACCGG CTGTCGCTGCACGCCGTCGACCTGCGCCCGGGCGCCGTCCTGGAGACGGGCTGCGTCTACATCGCGGAGCTCCAGGAGAG CCTCGCCCTGCCGGCCGATCTCGCGGCGGCCGCGAACCCGAAGAGCTCGACCGGGCGCATCGACGTCTTCACCCGCGTGA TCACCGACCGCGGCGAGGCCTTCGACCAGGTCGAGCCCGGCTACGACGGGCCGCTCTACGCGGAGATCTCGCCGCGCACC TTCCCGGTCCTCGTGCGCAGCGGCTCGCGGCTGTCGCAGATCCGCTTCCGCCGCGGGGCGCCGCGGCTGACCGAGGTCGA GCTCGGCCTGCTGCACGCCCGCTCGGCCCTGGTCGACGCCGGCAGCCCGTCCTTCCAGGGCGGCGTCGCGGTCTCGGTGG ACCTCGCCGGCTTCGACGGCCTCGTGGGTTACCGGGCGAAGCGCCACACCGGCCTCGTCGACGTGGACGCCCCCGGCCGC CACCGGGCCGCGGATTTCTGGGAGCCCCTCGCCGCCGACGGGTCGGGCAGCCTGATCCTCGACCCCGGCCAGTTCTACAT CCTGGCCTCGAAGGAGGCCGTGCAGGTCCCGCCGGACCACGCCGCCGAGATGGTGCCGTTCGATCCTCTGGTGGGCGAGT TCCGGGTCCACTACGCGGGCTTCTTCGACCCGGGCTTCGGCTATGCCGGGGCGGGCGGGGCGGGCGCGCGGGCCGTGCTG GAGGTCCGCTCCCGCGACGTGCCGTTCCTCCTGGAGGACGGGCAGATCGTCGGCCGCCTCGTCTACGAGCGGATGCTCGA CCTGCCGGAGACGCTCTACGGGGCCGGGGCCGGCTCGAACTACCAGGCCCAGGGGCTCAAGCTCTCGAAGCATTTCGCCC TGTAG
Upstream 100 bases:
>100_bases GCCTGCGGAAGCGGTTAAGCCCGCGTTAGCGGGTCCCGACGGACAACGCTGATCGGAGTGACGCGGACCGGCCGGGGCGC GCGAAGGAGTCAGGGGCGCG
Downstream 100 bases:
>100_bases TCCGGCCCGGACCCGCAGACGGGAGCAGCGATCGCATGGACGCCGTCGACCGGAAGATCCTCGATCTCCTCCAGCAGGAC GCGACGCTCCCGGTGGCCGA
Product: 2'-deoxycytidine 5'-triphosphate deaminase
Products: dUTP; NH3
Alternate protein names: 2-Deoxycytidine 5-Triphosphate Deaminase; 2-Deoxycytidine 5'-Triphosphate Deaminase Superfamily; 2`-Deoxycytidine 5`-Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MNAGAATGAAESSADGRSGILPAQAIAALAQAGGIRTASPFAPDQIQPASLDLRLGAKAYRVRTSFLPGSGRTVQACVDR LSLHAVDLRPGAVLETGCVYIAELQESLALPADLAAAANPKSSTGRIDVFTRVITDRGEAFDQVEPGYDGPLYAEISPRT FPVLVRSGSRLSQIRFRRGAPRLTEVELGLLHARSALVDAGSPSFQGGVAVSVDLAGFDGLVGYRAKRHTGLVDVDAPGR HRAADFWEPLAADGSGSLILDPGQFYILASKEAVQVPPDHAAEMVPFDPLVGEFRVHYAGFFDPGFGYAGAGGAGARAVL EVRSRDVPFLLEDGQIVGRLVYERMLDLPETLYGAGAGSNYQAQGLKLSKHFAL
Sequences:
>Translated_374_residues MNAGAATGAAESSADGRSGILPAQAIAALAQAGGIRTASPFAPDQIQPASLDLRLGAKAYRVRTSFLPGSGRTVQACVDR LSLHAVDLRPGAVLETGCVYIAELQESLALPADLAAAANPKSSTGRIDVFTRVITDRGEAFDQVEPGYDGPLYAEISPRT FPVLVRSGSRLSQIRFRRGAPRLTEVELGLLHARSALVDAGSPSFQGGVAVSVDLAGFDGLVGYRAKRHTGLVDVDAPGR HRAADFWEPLAADGSGSLILDPGQFYILASKEAVQVPPDHAAEMVPFDPLVGEFRVHYAGFFDPGFGYAGAGGAGARAVL EVRSRDVPFLLEDGQIVGRLVYERMLDLPETLYGAGAGSNYQAQGLKLSKHFAL >Mature_374_residues MNAGAATGAAESSADGRSGILPAQAIAALAQAGGIRTASPFAPDQIQPASLDLRLGAKAYRVRTSFLPGSGRTVQACVDR LSLHAVDLRPGAVLETGCVYIAELQESLALPADLAAAANPKSSTGRIDVFTRVITDRGEAFDQVEPGYDGPLYAEISPRT FPVLVRSGSRLSQIRFRRGAPRLTEVELGLLHARSALVDAGSPSFQGGVAVSVDLAGFDGLVGYRAKRHTGLVDVDAPGR HRAADFWEPLAADGSGSLILDPGQFYILASKEAVQVPPDHAAEMVPFDPLVGEFRVHYAGFFDPGFGYAGAGGAGARAVL EVRSRDVPFLLEDGQIVGRLVYERMLDLPETLYGAGAGSNYQAQGLKLSKHFAL
Specific function: Unknown
COG id: COG0717
COG function: function code F; Deoxycytidine deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.4.13
Molecular weight: Translated: 39296; Mature: 39296
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAGAATGAAESSADGRSGILPAQAIAALAQAGGIRTASPFAPDQIQPASLDLRLGAKAY CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCEEE RVRTSFLPGSGRTVQACVDRLSLHAVDLRPGAVLETGCVYIAELQESLALPADLAAAANP EEEEEECCCCCCCHHHHHHHHHEEEEECCCCCEECCCHHHHHHHHHHHCCCHHHHHCCCC KSSTGRIDVFTRVITDRGEAFDQVEPGYDGPLYAEISPRTFPVLVRSGSRLSQIRFRRGA CCCCCEEEEHHHHHHCCCCHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHCCC PRLTEVELGLLHARSALVDAGSPSFQGGVAVSVDLAGFDGLVGYRAKRHTGLVDVDAPGR CCCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHCCHHCCCCEEEECCCCC HRAADFWEPLAADGSGSLILDPGQFYILASKEAVQVPPDHAAEMVPFDPLVGEFRVHYAG CCCHHHHHHHCCCCCCCEEECCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEE FFDPGFGYAGAGGAGARAVLEVRSRDVPFLLEDGQIVGRLVYERMLDLPETLYGAGAGSN EECCCCCCCCCCCCCHHHHEEECCCCCCEEEECCHHHHHHHHHHHHCCCHHHHCCCCCCC YQAQGLKLSKHFAL CCCCCEEEHHCCCC >Mature Secondary Structure MNAGAATGAAESSADGRSGILPAQAIAALAQAGGIRTASPFAPDQIQPASLDLRLGAKAY CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCEEE RVRTSFLPGSGRTVQACVDRLSLHAVDLRPGAVLETGCVYIAELQESLALPADLAAAANP EEEEEECCCCCCCHHHHHHHHHEEEEECCCCCEECCCHHHHHHHHHHHCCCHHHHHCCCC KSSTGRIDVFTRVITDRGEAFDQVEPGYDGPLYAEISPRTFPVLVRSGSRLSQIRFRRGA CCCCCEEEEHHHHHHCCCCHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHCCC PRLTEVELGLLHARSALVDAGSPSFQGGVAVSVDLAGFDGLVGYRAKRHTGLVDVDAPGR CCCEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHCCHHCCCCEEEECCCCC HRAADFWEPLAADGSGSLILDPGQFYILASKEAVQVPPDHAAEMVPFDPLVGEFRVHYAG CCCHHHHHHHCCCCCCCEEECCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEEE FFDPGFGYAGAGGAGARAVLEVRSRDVPFLLEDGQIVGRLVYERMLDLPETLYGAGAGSN EECCCCCCCCCCCCCHHHHEEECCCCCCEEEECCHHHHHHHHHHHHCCCHHHHCCCCCCC YQAQGLKLSKHFAL CCCCCEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dCTP; H2O
Specific reaction: dCTP + H2O = dUTP + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA