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The map label for this gene is fliR [H]

Identifier: 170748649

GI number: 170748649

Start: 2366396

End: 2367157

Strand: Reverse

Name: fliR [H]

Synonym: Mrad2831_2231

Alternate gene names: 170748649

Gene position: 2367157-2366396 (Counterclockwise)

Preceding gene: 170748650

Following gene: 170748648

Centisome position: 38.95

GC content: 68.77

Gene sequence:

>762_bases
ATGAACCTGCTCCTGCCCGGCATCGCCTCGGCCTACCTGATCACCTTCGCGCGCATCGGCACGCTGATCATGCTGATGCC
GGGGATCGGCGAGCAGACGGTGTCGCCACGGCTGCGCCTCGCCTTCGCGCTGCTCACCGCCCTGGTGCTGTTCCCGACCG
TGCGCCCGCTGCTCGGCGGCACCGAGGGCGTGGCCGGCCCGCGGCTGATCGGGCTCCTGTTCGGCGAGACGATCATCGGG
CTCGTGCTCGGCCTGACAGTGCGCATGATCCTCGCCGCCCTTCAGACCGCCGGGGTGATCATCTCTGCGCAGGTCGGGCT
GTCCTACGCCATGACGGTCGATCCCAGCCAGGGCGGCCAGCAGGTGGCGATCGGCAACTTCCTGTCGCTGCTCGGGATCA
CGCTGATCTTCGCCGCGGACCTGCACCATCTCGCCATCGAGGGCGTGGCCCGCAGCTACGAGGTGCTGCCCCCCGACGGC
GTGCCGTCCTTCTCGGACGCGCTGATGCTGGCCACGAAGGCGCTCGCCCGGGGCTTCACCCTGGCGGTGCAGATCTCCGG
CCCGTTCATCGCCTTCGGGATCCTGTTCAACCTGGGGCTCGGCGTGCTGTCGCGGCTGATGCCCCAGATGCAGGTGTTCT
TCCTGGCGGTGCCGGCCTCGGTGCTGATCGGCATGCTGCTGCTGATGGGATGCCTCGGCGTCATGATGGGCGTCTTCCTC
GACGATCTGGGCCGGTATCTCGGGGATTACGTCGGCCGCTGA

Upstream 100 bases:

>100_bases
GGCCGGCTACATGACCCGCATCGCCGCCCGCATCGCGGCCGGCGGCTGATGCGCGCGCCGGCCGGGACAGGCGCGGCTCC
CGCGTGCCATAGGGGCCGCG

Downstream 100 bases:

>100_bases
GCGGCCGGACCGCCCGTGACCCGATGATGTCCACGCTCTGAGCGCGACGTGAGATGGCCGACGATACCGACGACGAGGAC
AAGACCGAGGAGCCGTCCCA

Product: flagellar biosynthetic protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNLLLPGIASAYLITFARIGTLIMLMPGIGEQTVSPRLRLAFALLTALVLFPTVRPLLGGTEGVAGPRLIGLLFGETIIG
LVLGLTVRMILAALQTAGVIISAQVGLSYAMTVDPSQGGQQVAIGNFLSLLGITLIFAADLHHLAIEGVARSYEVLPPDG
VPSFSDALMLATKALARGFTLAVQISGPFIAFGILFNLGLGVLSRLMPQMQVFFLAVPASVLIGMLLLMGCLGVMMGVFL
DDLGRYLGDYVGR

Sequences:

>Translated_253_residues
MNLLLPGIASAYLITFARIGTLIMLMPGIGEQTVSPRLRLAFALLTALVLFPTVRPLLGGTEGVAGPRLIGLLFGETIIG
LVLGLTVRMILAALQTAGVIISAQVGLSYAMTVDPSQGGQQVAIGNFLSLLGITLIFAADLHHLAIEGVARSYEVLPPDG
VPSFSDALMLATKALARGFTLAVQISGPFIAFGILFNLGLGVLSRLMPQMQVFFLAVPASVLIGMLLLMGCLGVMMGVFL
DDLGRYLGDYVGR
>Mature_253_residues
MNLLLPGIASAYLITFARIGTLIMLMPGIGEQTVSPRLRLAFALLTALVLFPTVRPLLGGTEGVAGPRLIGLLFGETIIG
LVLGLTVRMILAALQTAGVIISAQVGLSYAMTVDPSQGGQQVAIGNFLSLLGITLIFAADLHHLAIEGVARSYEVLPPDG
VPSFSDALMLATKALARGFTLAVQISGPFIAFGILFNLGLGVLSRLMPQMQVFFLAVPASVLIGMLLLMGCLGVMMGVFL
DDLGRYLGDYVGR

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=232, Percent_Identity=28.448275862069, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 26528; Mature: 26528

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLLPGIASAYLITFARIGTLIMLMPGIGEQTVSPRLRLAFALLTALVLFPTVRPLLGG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TEGVAGPRLIGLLFGETIIGLVLGLTVRMILAALQTAGVIISAQVGLSYAMTVDPSQGGQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCCCC
QVAIGNFLSLLGITLIFAADLHHLAIEGVARSYEVLPPDGVPSFSDALMLATKALARGFT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCE
LAVQISGPFIAFGILFNLGLGVLSRLMPQMQVFFLAVPASVLIGMLLLMGCLGVMMGVFL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDLGRYLGDYVGR
HHHHHHHHHHHCC
>Mature Secondary Structure
MNLLLPGIASAYLITFARIGTLIMLMPGIGEQTVSPRLRLAFALLTALVLFPTVRPLLGG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TEGVAGPRLIGLLFGETIIGLVLGLTVRMILAALQTAGVIISAQVGLSYAMTVDPSQGGQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEEEECCCCCCC
QVAIGNFLSLLGITLIFAADLHHLAIEGVARSYEVLPPDGVPSFSDALMLATKALARGFT
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCE
LAVQISGPFIAFGILFNLGLGVLSRLMPQMQVFFLAVPASVLIGMLLLMGCLGVMMGVFL
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DDLGRYLGDYVGR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7814323; 11259647 [H]