| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is glnH [H]
Identifier: 170748630
GI number: 170748630
Start: 2349456
End: 2350259
Strand: Reverse
Name: glnH [H]
Synonym: Mrad2831_2212
Alternate gene names: 170748630
Gene position: 2350259-2349456 (Counterclockwise)
Preceding gene: 170748647
Following gene: 170748629
Centisome position: 38.67
GC content: 67.16
Gene sequence:
>804_bases GTGCGCCGCCTCTTCGCCTTCGCCCTCGCCATCGTCCTGTCTGCGGGCCCCGCCCTGGCCGACCGTCTGGACGCCATCCG ACAGGCCGGCGTTCTCCGGGTCGCCGCCTTCGACAGCAACCCACCTTTCGGTTTCGTCGATCCGGCGACGAAGCGGATCA ACGGCCTGGACGTCGAGTACGCGCAGGCCATCGCCGACGCGCTCGGCGTCAAGCTGGAGGTTCGGCCCACCAATCCGGCG AATCGGATCCCGCTGCTCACCTCCGGCAAGGTCGATCTGGTTCTGGCGAATTTCACCATCACGGACGAGCGGGCCAAGCA GCTCGATTTCAGCATCCCGTACTTCGCCTCCGGCCAGCAATTCCTGGCGAAGAAGGGCACCCTGTCGTCGCCGGAGCAGC TGAACGGGCTCCGGATCGGCGCCGACAAGGGCACAACCAATGAGATCGTCCTGCGCCGCGATTTCCCGAGGGCCATCGTG GTAGCCTTCGACGACACGCCCTTCGCCTTCACGGCGCTGCGCAACGGCAACGTTCAGGCGATCACGCAGGACGGTCCGAA GCTGGTCGGGCTGCTCGCGAAGGTGCCGGACCGGGAGAACTACGAGATTCCCGCCTTCAGTATCTCCAACGACTATATCG GCGTCGGCATCCCGAAGGGCGAGACGCGCCTGCGGGATCTCGTGAACGAGACTCTGCGCGGCCTGGAGGCGAGCGGGCGG GCGGCCGCGATCTACGACCGCTGGTTCGGGCCCGAGACCGAGCAGCCCCTGCCGCGCCTGTTCCGGATCGGGGACCGTAG CTGA
Upstream 100 bases:
>100_bases TGTTAATTCTTCTCCACACGCACAGCCAGACCGAGAACATCCGGGAAACTGGGCAATACCTTCACCTGTACGGACTTCCG ACGATCTGATGGAGCTACCT
Downstream 100 bases:
>100_bases CCGAGTCGGCCCGGCACCGATGACTCCACTGGTCGGCGACGCGCTCGCGCCGCGCTACCTCGCCTGGCTGCTGCAGGGCT TCGGCGTCACCCTGGCCCTG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MRRLFAFALAIVLSAGPALADRLDAIRQAGVLRVAAFDSNPPFGFVDPATKRINGLDVEYAQAIADALGVKLEVRPTNPA NRIPLLTSGKVDLVLANFTITDERAKQLDFSIPYFASGQQFLAKKGTLSSPEQLNGLRIGADKGTTNEIVLRRDFPRAIV VAFDDTPFAFTALRNGNVQAITQDGPKLVGLLAKVPDRENYEIPAFSISNDYIGVGIPKGETRLRDLVNETLRGLEASGR AAAIYDRWFGPETEQPLPRLFRIGDRS
Sequences:
>Translated_267_residues MRRLFAFALAIVLSAGPALADRLDAIRQAGVLRVAAFDSNPPFGFVDPATKRINGLDVEYAQAIADALGVKLEVRPTNPA NRIPLLTSGKVDLVLANFTITDERAKQLDFSIPYFASGQQFLAKKGTLSSPEQLNGLRIGADKGTTNEIVLRRDFPRAIV VAFDDTPFAFTALRNGNVQAITQDGPKLVGLLAKVPDRENYEIPAFSISNDYIGVGIPKGETRLRDLVNETLRGLEASGR AAAIYDRWFGPETEQPLPRLFRIGDRS >Mature_267_residues MRRLFAFALAIVLSAGPALADRLDAIRQAGVLRVAAFDSNPPFGFVDPATKRINGLDVEYAQAIADALGVKLEVRPTNPA NRIPLLTSGKVDLVLANFTITDERAKQLDFSIPYFASGQQFLAKKGTLSSPEQLNGLRIGADKGTTNEIVLRRDFPRAIV VAFDDTPFAFTALRNGNVQAITQDGPKLVGLLAKVPDRENYEIPAFSISNDYIGVGIPKGETRLRDLVNETLRGLEASGR AAAIYDRWFGPETEQPLPRLFRIGDRS
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=259, Percent_Identity=33.2046332046332, Blast_Score=127, Evalue=8e-31, Organism=Escherichia coli, GI1787088, Length=231, Percent_Identity=28.5714285714286, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1787031, Length=200, Percent_Identity=31, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1786876, Length=248, Percent_Identity=29.0322580645161, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787085, Length=255, Percent_Identity=27.843137254902, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1788649, Length=228, Percent_Identity=23.2456140350877, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1788648, Length=205, Percent_Identity=22.9268292682927, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29124; Mature: 29124
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLFAFALAIVLSAGPALADRLDAIRQAGVLRVAAFDSNPPFGFVDPATKRINGLDVEY CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHCCCCCHHH AQAIADALGVKLEVRPTNPANRIPLLTSGKVDLVLANFTITDERAKQLDFSIPYFASGQQ HHHHHHHHCCEEEEECCCCCCCCCEEECCCEEEEEEEEEECCHHHHHCCCCCCCCCCCHH FLAKKGTLSSPEQLNGLRIGADKGTTNEIVLRRDFPRAIVVAFDDTPFAFTALRNGNVQA HHHHCCCCCCHHHCCCEEEECCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCEEE ITQDGPKLVGLLAKVPDRENYEIPAFSISNDYIGVGIPKGETRLRDLVNETLRGLEASGR EECCCHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCC AAAIYDRWFGPETEQPLPRLFRIGDRS EEEEEECCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MRRLFAFALAIVLSAGPALADRLDAIRQAGVLRVAAFDSNPPFGFVDPATKRINGLDVEY CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHCCCCCHHH AQAIADALGVKLEVRPTNPANRIPLLTSGKVDLVLANFTITDERAKQLDFSIPYFASGQQ HHHHHHHHCCEEEEECCCCCCCCCEEECCCEEEEEEEEEECCHHHHHCCCCCCCCCCCHH FLAKKGTLSSPEQLNGLRIGADKGTTNEIVLRRDFPRAIVVAFDDTPFAFTALRNGNVQA HHHHCCCCCCHHHCCCEEEECCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEECCCEEE ITQDGPKLVGLLAKVPDRENYEIPAFSISNDYIGVGIPKGETRLRDLVNETLRGLEASGR EECCCHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCC AAAIYDRWFGPETEQPLPRLFRIGDRS EEEEEECCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]