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The map label for this gene is secY [H]

Identifier: 170748616

GI number: 170748616

Start: 2341233

End: 2342579

Strand: Reverse

Name: secY [H]

Synonym: Mrad2831_2198

Alternate gene names: 170748616

Gene position: 2342579-2341233 (Counterclockwise)

Preceding gene: 170748617

Following gene: 170748615

Centisome position: 38.54

GC content: 66.59

Gene sequence:

>1347_bases
ATGGCCTCAGCCGCCGAGCAGCTTGCCGCCAATCTCAATTTCGGTGCGATCGCCAAGGCCGATGAGCTGAAGAAGCGCAT
CTGGTTCACGCTCGGCGCGCTCGTGGTGTTCCGGCTGGGCACGTACATCCCGATCCCCGGCATCGACCCGGAGCAGTTCG
CCCGGAACTTCCAGCAGCAGGCGGGCGGCGTGCTGGGCCTGTTCAACATGTTCTCGGGCGGCGCCGTGGAGCGCATGGCG
ATCTTCGCCCTGAACATCATGCCCTACATCTCGGCCTCGATCATCGTGCAGCTCCTGACCTCGGTGATCCCGAGCCTGGA
AGCGCTGAAGAAGGAGGGCGAGTCGGGCCGCAAGGTCATCAACCAGTACACCCGCTACCTGACGGTGGTGCTGGCGCTGG
TTCAGTCCTGGGGCATCGCGATCGGTCTCCAGGGCTCCTCGGCCGCGATCGATCCGGGCCCGTTCTTCCTGGCCTCGACG
GTGATCACGCTGACGGGCGGGACCCTGTTCCTGATGTGGCTCGGCGAGCAGATCACCTCGCGCGGCATCGGCAACGGCTC
GTCGCTGATCATCTTCGCCGGCATCGTGGCCCACCTGCCGGTGGCGATCGCGGGCGCGCTCGAACTCGGCCGGACCGGCG
CCCTATCGCCGGCGATCATCCTGGGCGTGGGCGTCGCCGCCGTGGCGCTCGTCTACTTCATCGTGTTCATGGAGCGCGCC
CAGCGCCGGCTGCTCATCAACTACCCGAAGCGCCAGGTCGGCAACCGCATGTACGAGGGCCAGACCTCGTTCCTGCCGCT
CAAGCTCAACACCTCGGGCGTGATCCCGCCGATCTTCGCTTCGTCGCTGCTGCTGCTGCCGGCCACCGCGGCGAGCTTCT
CGGCCAACGGTGGCGCCACCGGCTGGCTCGGCACGGTCACCGCCTATCTCGGCCACGGCACGCCGCTGTTCATGGTGCTC
TACGCGGCGCTGATCATCTTCTTCACGTTCTTCTACACGGCGGTGGTGTTCAATCCGCAGGAGACGGCCGACAACCTGAA
GAAGCATGGCGGCTTCATCCCGGGTATCCGCCCGGGTGAGCGCACCGCGGCTTTCATCGACAAGGTGCTGACCCGCATCA
CGGTGATCGGCGCCCTGTACCTGACCTTCGTGTGCCTTTGCCCGGAGATCCTGTCGTCCTACGCGGCGGCCAGCCTCGGC
TTCGGCGGCACCTCGCTGCTGATCGTGGTCTCGGTCACGATGGACACGGTGGCGCAGATCCACGGGCACCTGATGGCCCA
TCAGTACGAGGGCCTCGTGAAGAAGGCCAAGCTGCGTGGCGCCTCGACCACGCAACGGCGGCGCTGA

Upstream 100 bases:

>100_bases
TTAAGCCGATCCTTCGAGCGGCGGCCCTGCGACCACGCGGGCCGCCGTTTTCATTTCATCCGGGCCGGTCGCCCGGCGAC
ACTTCCAGGACGCGACGCTT

Downstream 100 bases:

>100_bases
GCCTGCTACAGAGGCGGGCCGACCCCGAGGATACTCCCGCCTCTGGCCCAAAGGTCTGGATGCCTCACCGGCCCGGACCG
GCTAGAAAATCCCGAACCCG

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MASAAEQLAANLNFGAIAKADELKKRIWFTLGALVVFRLGTYIPIPGIDPEQFARNFQQQAGGVLGLFNMFSGGAVERMA
IFALNIMPYISASIIVQLLTSVIPSLEALKKEGESGRKVINQYTRYLTVVLALVQSWGIAIGLQGSSAAIDPGPFFLAST
VITLTGGTLFLMWLGEQITSRGIGNGSSLIIFAGIVAHLPVAIAGALELGRTGALSPAIILGVGVAAVALVYFIVFMERA
QRRLLINYPKRQVGNRMYEGQTSFLPLKLNTSGVIPPIFASSLLLLPATAASFSANGGATGWLGTVTAYLGHGTPLFMVL
YAALIIFFTFFYTAVVFNPQETADNLKKHGGFIPGIRPGERTAAFIDKVLTRITVIGALYLTFVCLCPEILSSYAAASLG
FGGTSLLIVVSVTMDTVAQIHGHLMAHQYEGLVKKAKLRGASTTQRRR

Sequences:

>Translated_448_residues
MASAAEQLAANLNFGAIAKADELKKRIWFTLGALVVFRLGTYIPIPGIDPEQFARNFQQQAGGVLGLFNMFSGGAVERMA
IFALNIMPYISASIIVQLLTSVIPSLEALKKEGESGRKVINQYTRYLTVVLALVQSWGIAIGLQGSSAAIDPGPFFLAST
VITLTGGTLFLMWLGEQITSRGIGNGSSLIIFAGIVAHLPVAIAGALELGRTGALSPAIILGVGVAAVALVYFIVFMERA
QRRLLINYPKRQVGNRMYEGQTSFLPLKLNTSGVIPPIFASSLLLLPATAASFSANGGATGWLGTVTAYLGHGTPLFMVL
YAALIIFFTFFYTAVVFNPQETADNLKKHGGFIPGIRPGERTAAFIDKVLTRITVIGALYLTFVCLCPEILSSYAAASLG
FGGTSLLIVVSVTMDTVAQIHGHLMAHQYEGLVKKAKLRGASTTQRRR
>Mature_447_residues
ASAAEQLAANLNFGAIAKADELKKRIWFTLGALVVFRLGTYIPIPGIDPEQFARNFQQQAGGVLGLFNMFSGGAVERMAI
FALNIMPYISASIIVQLLTSVIPSLEALKKEGESGRKVINQYTRYLTVVLALVQSWGIAIGLQGSSAAIDPGPFFLASTV
ITLTGGTLFLMWLGEQITSRGIGNGSSLIIFAGIVAHLPVAIAGALELGRTGALSPAIILGVGVAAVALVYFIVFMERAQ
RRLLINYPKRQVGNRMYEGQTSFLPLKLNTSGVIPPIFASSLLLLPATAASFSANGGATGWLGTVTAYLGHGTPLFMVLY
AALIIFFTFFYTAVVFNPQETADNLKKHGGFIPGIRPGERTAAFIDKVLTRITVIGALYLTFVCLCPEILSSYAAASLGF
GGTSLLIVVSVTMDTVAQIHGHLMAHQYEGLVKKAKLRGASTTQRRR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=423, Percent_Identity=58.1560283687943, Blast_Score=452, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47781; Mature: 47650

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAAEQLAANLNFGAIAKADELKKRIWFTLGALVVFRLGTYIPIPGIDPEQFARNFQQQ
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
AGGVLGLFNMFSGGAVERMAIFALNIMPYISASIIVQLLTSVIPSLEALKKEGESGRKVI
HCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYLTVVLALVQSWGIAIGLQGSSAAIDPGPFFLASTVITLTGGTLFLMWLGEQITS
HHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RGIGNGSSLIIFAGIVAHLPVAIAGALELGRTGALSPAIILGVGVAAVALVYFIVFMERA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QRRLLINYPKRQVGNRMYEGQTSFLPLKLNTSGVIPPIFASSLLLLPATAASFSANGGAT
HHHHEECCCHHHHCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
GWLGTVTAYLGHGTPLFMVLYAALIIFFTFFYTAVVFNPQETADNLKKHGGFIPGIRPGE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCH
RTAAFIDKVLTRITVIGALYLTFVCLCPEILSSYAAASLGFGGTSLLIVVSVTMDTVAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHHHHHH
HGHLMAHQYEGLVKKAKLRGASTTQRRR
HHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ASAAEQLAANLNFGAIAKADELKKRIWFTLGALVVFRLGTYIPIPGIDPEQFARNFQQQ
CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
AGGVLGLFNMFSGGAVERMAIFALNIMPYISASIIVQLLTSVIPSLEALKKEGESGRKVI
HCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYLTVVLALVQSWGIAIGLQGSSAAIDPGPFFLASTVITLTGGTLFLMWLGEQITS
HHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
RGIGNGSSLIIFAGIVAHLPVAIAGALELGRTGALSPAIILGVGVAAVALVYFIVFMERA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QRRLLINYPKRQVGNRMYEGQTSFLPLKLNTSGVIPPIFASSLLLLPATAASFSANGGAT
HHHHEECCCHHHHCCHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
GWLGTVTAYLGHGTPLFMVLYAALIIFFTFFYTAVVFNPQETADNLKKHGGFIPGIRPGE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCH
RTAAFIDKVLTRITVIGALYLTFVCLCPEILSSYAAASLGFGGTSLLIVVSVTMDTVAQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHEEHHHHHHHHHH
HGHLMAHQYEGLVKKAKLRGASTTQRRR
HHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]