| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yfjG [H]
Identifier: 170748593
GI number: 170748593
Start: 2316832
End: 2317290
Strand: Reverse
Name: yfjG [H]
Synonym: Mrad2831_2175
Alternate gene names: 170748593
Gene position: 2317290-2316832 (Counterclockwise)
Preceding gene: 170748594
Following gene: 170748590
Centisome position: 38.13
GC content: 65.58
Gene sequence:
>459_bases ATGCCGTCCTTCCGGGTCACCCGCGCGGTGAAGCACACGCCGCAGCAGATGTACGACCTCGTCGCCGACGTGGAGCGCTA TCCCGAGTTCCTGCCGCTCTGCGAATCCCTGCGGGTGATCCGCCGGCAGGACATGCCCGATGGCGGGCAGGTGCTGATCG CCGAGATGGGCGTGGGCTACAAGGCGATCCGCGAGCGCTTCACCACGCGGGTGACCCTCGATCCGGCGAACCTCAAGATC GTGGCGGAGTATATCGACGGTCCGTTCCGGCACTTGGAGAACCGCTGGCTGTTCAAGGACGACCCGAACGGCGGCTGCAA CGTCGACTTCTTCATCACCTACGAGTTCAAGAGCCGCACCCTCGGACTCCTCATGGGCACGATGTTCGACCGGGCCTTCC GCAAATTCACCGACGCCTTCGAGGGGCGGGCGGATCGGATGTACGGGGCGCGGGCGTAG
Upstream 100 bases:
>100_bases GCGGTCGTCGCACCATGCGGGCGAGGACTTTGCGCGACTTCAGGCGGCGCGTCTGGCCAAACTGTCGCCCGCGCTCTCGG CCTGAGGAATCCCGAACACC
Downstream 100 bases:
>100_bases CCGCCGTCACGCGAGCGCAGCGAAGCACAGACGGCGTCAGGCCCGCAGCGGCACGCGCACGTGCTCGGGCCGCACGCCCA TCCCGATCATCCGCGCCGGA
Product: cyclase/dehydrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MPSFRVTRAVKHTPQQMYDLVADVERYPEFLPLCESLRVIRRQDMPDGGQVLIAEMGVGYKAIRERFTTRVTLDPANLKI VAEYIDGPFRHLENRWLFKDDPNGGCNVDFFITYEFKSRTLGLLMGTMFDRAFRKFTDAFEGRADRMYGARA
Sequences:
>Translated_152_residues MPSFRVTRAVKHTPQQMYDLVADVERYPEFLPLCESLRVIRRQDMPDGGQVLIAEMGVGYKAIRERFTTRVTLDPANLKI VAEYIDGPFRHLENRWLFKDDPNGGCNVDFFITYEFKSRTLGLLMGTMFDRAFRKFTDAFEGRADRMYGARA >Mature_151_residues PSFRVTRAVKHTPQQMYDLVADVERYPEFLPLCESLRVIRRQDMPDGGQVLIAEMGVGYKAIRERFTTRVTLDPANLKIV AEYIDGPFRHLENRWLFKDDPNGGCNVDFFITYEFKSRTLGLLMGTMFDRAFRKFTDAFEGRADRMYGARA
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Homo sapiens, GI13376737, Length=146, Percent_Identity=33.5616438356164, Blast_Score=79, Evalue=2e-15, Organism=Homo sapiens, GI151101386, Length=148, Percent_Identity=34.4594594594595, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI151101384, Length=148, Percent_Identity=34.4594594594595, Blast_Score=75, Evalue=3e-14, Organism=Escherichia coli, GI1788972, Length=151, Percent_Identity=34.4370860927152, Blast_Score=90, Evalue=5e-20, Organism=Drosophila melanogaster, GI221330016, Length=146, Percent_Identity=32.8767123287671, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI24586033, Length=146, Percent_Identity=32.8767123287671, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI20129725, Length=146, Percent_Identity=32.8767123287671, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 17671; Mature: 17539
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFRVTRAVKHTPQQMYDLVADVERYPEFLPLCESLRVIRRQDMPDGGQVLIAEMGVGY CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCH KAIRERFTTRVTLDPANLKIVAEYIDGPFRHLENRWLFKDDPNGGCNVDFFITYEFKSRT HHHHHHHHHEEEECCCCCEEEHHHHCCHHHHHCCCCCEECCCCCCCCEEEEEEEECCCHH LGLLMGTMFDRAFRKFTDAFEGRADRMYGARA HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC >Mature Secondary Structure PSFRVTRAVKHTPQQMYDLVADVERYPEFLPLCESLRVIRRQDMPDGGQVLIAEMGVGY CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCH KAIRERFTTRVTLDPANLKIVAEYIDGPFRHLENRWLFKDDPNGGCNVDFFITYEFKSRT HHHHHHHHHEEEECCCCCEEEHHHHCCHHHHHCCCCCEECCCCCCCCEEEEEEEECCCHH LGLLMGTMFDRAFRKFTDAFEGRADRMYGARA HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7524073; 9205837; 9278503 [H]