| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is luxQ [H]
Identifier: 170748577
GI number: 170748577
Start: 2300259
End: 2302649
Strand: Reverse
Name: luxQ [H]
Synonym: Mrad2831_2159
Alternate gene names: 170748577
Gene position: 2302649-2300259 (Counterclockwise)
Preceding gene: 170748578
Following gene: 170748576
Centisome position: 37.89
GC content: 72.23
Gene sequence:
>2391_bases ATGAGCGAGACTGAGAGCGGCCCAGGATCCGTCACGGATGCCGATTACCGCAACCTCGCCGAGACGCTGCCGCAGCTCGC CTGGATCGCCGAGGCCGACGGCACGATCATCTGGTACAATCAGCGCTGGTACGACTACACCGGCACCTCCCTCGACGAGA TGCGGGGCTGGGGCTGGCGCACGGTCCATCACCCGGACCACGTCGCGGCCGTGACCGAGCGCTACCGCGCCGCGATCACG CTGGGCCGGTCCTGGGAGGACACGTTCCCGCTGCGCGGCCGCGACGGGAGCTACCGCTGGTTCCTGTCGAAGGCGCTGCC CCACCGGGACGAGTCCGGGCGGATCCTGCGCTGGTACGGGACCAACACCGACATCACCGGCCGCCGCGCGGTCGAGGAGC GCCTGCGCCACTCCGAGCAGCGCTTCCGGGCGCTGGTGGACGCCTCGGCGGCGGTGATCTGGAACACCGACGCGGCGGGC GAGCTGATGCCGCCGCAGGTCCGGTGGAGCACCTATACCGGGCAGACCGAGGAGGCCTACCAGGGCTGGGGCTGGCTGGA CGCCGTCCATCCCGACGACCGGGGCCACGCGGCCGACGCCTGGGCGGCCTGCGTCGAGGCGCGCGCGACCTACGAGGTCG AGTACAGGCTGCGCCGGTACGACGGGGTCTGGCGCGCCATGGAGGTGCGCGGCGTGCCGGTCCTCGCCGAGGACGGCTCC CTGCGGGAATGGGTCGGCACCTGCGTCGACGTCACCGAGCGGAAGGAGGCCGAGGAGGCGGTGGAGCGCGCCCGGCAGGC CGCCGAGGCGGCCAACCGGGCGAAGAGCCAGTTCATCGCCAACATGAGCCACGAGCTGCGCACGCCGCTCTCGGCGGTGA TCGGCTACTCCGAGATGCTCGGCGAGGAGCTGGAGGATATCGGCCAGGCCGCCCTCCTGCCCGACCTGCGCAAGATCGAG GCGGCCGCCCGCCACCTGCTCTCGCTGATCAACGACGTGCTCGACATCTCGAAGATCGAGGCGGGCCGCATGACCGCCTC GGCCGAGACCTTCACGGTGTCGGACCTGCTCCGGGACGTCTCCGACTCCACCGGCTCCCTGGTTGAGAAGAAGGGCAACC GCTTCGTCCTGGACACCGGCGCGGCCGGGACGGCCGACCTGGGGTCCATGCACCAGGACCAGACCAAGATCCGCCAGTGC CTGCTGAACCTGATCGGCAACGCCGCGAAGTTCACCGAGCGGGGAACGATCACCCTGACGGTGCGGCGGCACCGGGAGGA GGGAGCCGACTGGCTGTCCTTCGCGGTCGCCGACACCGGCATCGGCCTGACCGAGGAGCAGATCGGGCGCCTGTTCGAGC GCTTCGTCCAGGCCGACGATTCGACGACCCGGCAGTTCGGCGGCACGGGCCTCGGGCTCGCCATCACCCGCGCGTTCTGC CGGACGATGGGCGGCGACATCGGCGTCGCCAGCACGCCGGGCGCGGGCGCGACCTTCACGATCCGCCTGCCCGCCACCCT GCGGCCCGAGGACGCGCCGCCCTCCGAGGCCGAGGCCCACACGCCGGTGGAGCCGCACGAGCAGCACGAGACGGTGCTGC TGGTCGACGACGACCCGGCCGCCCGGGAATTGCTCCAGCGCTTCCTGGAACGCGAGGGCTTCCACGTCCGCAGCGCCAAC GACGGCCGCGCCGGCCTGACGCTCGCCCGGGCCCTGAAGCCGCGCGCGATCCTGCTCGACGTCGAGATGCCGCGCATGGA CGGCTGGGCGGTCCTGCACGCGGTGCGCAACGACCCCGACCTCGCCGGTACGCCGGTGATCATGACCTCGGTCGTGGCCG AGCAGGGGCTCGGCCAGGCGCTCGGCGCCACCGACTACTTCGTCAAGCCGATCGACTGGGACCGGCTCAAGGGCCTGATG GAGCGCTACCGGCCCGAGGCGCCGGAGGATGCCCGCGTCCTCGTGGTCGACGACGACGCGGATGCCCGCGAGCGCCTGCG CCGGTCGCTCGGCCGCGAGGGCTGGACCGTCGACGAGGCGGAGAACGGCCGGATCGCCCTGGAGCGGGTCAGCCAGGCGC GGCCGAGCCTGATCCTGCTCGACCTGATGATGCCCGAGATGGACGGGTTCGGCTTCCTCCGGGCCTTGCGGGCGCGGCCC GACGGCGACGTGCCCGTGGTGGTGCTCACCGCCAAGGAGGTCACGGCGGCCGAGAAGGAGAGCCTGAACCGGCAGGCCGA CCGGGTGATCGCCAAGGGCTCCATGAGCCTCGCGGAGATCGGCCGGCAACTGCGCGTCCTCTACGCGCGTTCGGCGACCG AGCCGGTGCCGGGGCAGCTCCAGGGGTTGCTCGATCGGCTCGCCGAGAAGGACGCGGGAGAACCACGATGA
Upstream 100 bases:
>100_bases CCGGCCCCCGCGGCCCCGCGGTCGGATCCCGACGCGATGCGTGTATAAGGAGTACGGGTATAAGCCGCCGCGGGGCGGGT GACGGGACAGCGTCGGGTCG
Downstream 100 bases:
>100_bases GTGCCGACGGGATCGATCCGGAGAAGGCGGTGGCCATCCGGCTGCGGGCGCGGCTCGCGGTGGTGGAGCGGGCGGCGTGG TTCGGCTTCGTCCACGCGAT
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 796; Mature: 795
Protein sequence:
>796_residues MSETESGPGSVTDADYRNLAETLPQLAWIAEADGTIIWYNQRWYDYTGTSLDEMRGWGWRTVHHPDHVAAVTERYRAAIT LGRSWEDTFPLRGRDGSYRWFLSKALPHRDESGRILRWYGTNTDITGRRAVEERLRHSEQRFRALVDASAAVIWNTDAAG ELMPPQVRWSTYTGQTEEAYQGWGWLDAVHPDDRGHAADAWAACVEARATYEVEYRLRRYDGVWRAMEVRGVPVLAEDGS LREWVGTCVDVTERKEAEEAVERARQAAEAANRAKSQFIANMSHELRTPLSAVIGYSEMLGEELEDIGQAALLPDLRKIE AAARHLLSLINDVLDISKIEAGRMTASAETFTVSDLLRDVSDSTGSLVEKKGNRFVLDTGAAGTADLGSMHQDQTKIRQC LLNLIGNAAKFTERGTITLTVRRHREEGADWLSFAVADTGIGLTEEQIGRLFERFVQADDSTTRQFGGTGLGLAITRAFC RTMGGDIGVASTPGAGATFTIRLPATLRPEDAPPSEAEAHTPVEPHEQHETVLLVDDDPAARELLQRFLEREGFHVRSAN DGRAGLTLARALKPRAILLDVEMPRMDGWAVLHAVRNDPDLAGTPVIMTSVVAEQGLGQALGATDYFVKPIDWDRLKGLM ERYRPEAPEDARVLVVDDDADARERLRRSLGREGWTVDEAENGRIALERVSQARPSLILLDLMMPEMDGFGFLRALRARP DGDVPVVVLTAKEVTAAEKESLNRQADRVIAKGSMSLAEIGRQLRVLYARSATEPVPGQLQGLLDRLAEKDAGEPR
Sequences:
>Translated_796_residues MSETESGPGSVTDADYRNLAETLPQLAWIAEADGTIIWYNQRWYDYTGTSLDEMRGWGWRTVHHPDHVAAVTERYRAAIT LGRSWEDTFPLRGRDGSYRWFLSKALPHRDESGRILRWYGTNTDITGRRAVEERLRHSEQRFRALVDASAAVIWNTDAAG ELMPPQVRWSTYTGQTEEAYQGWGWLDAVHPDDRGHAADAWAACVEARATYEVEYRLRRYDGVWRAMEVRGVPVLAEDGS LREWVGTCVDVTERKEAEEAVERARQAAEAANRAKSQFIANMSHELRTPLSAVIGYSEMLGEELEDIGQAALLPDLRKIE AAARHLLSLINDVLDISKIEAGRMTASAETFTVSDLLRDVSDSTGSLVEKKGNRFVLDTGAAGTADLGSMHQDQTKIRQC LLNLIGNAAKFTERGTITLTVRRHREEGADWLSFAVADTGIGLTEEQIGRLFERFVQADDSTTRQFGGTGLGLAITRAFC RTMGGDIGVASTPGAGATFTIRLPATLRPEDAPPSEAEAHTPVEPHEQHETVLLVDDDPAARELLQRFLEREGFHVRSAN DGRAGLTLARALKPRAILLDVEMPRMDGWAVLHAVRNDPDLAGTPVIMTSVVAEQGLGQALGATDYFVKPIDWDRLKGLM ERYRPEAPEDARVLVVDDDADARERLRRSLGREGWTVDEAENGRIALERVSQARPSLILLDLMMPEMDGFGFLRALRARP DGDVPVVVLTAKEVTAAEKESLNRQADRVIAKGSMSLAEIGRQLRVLYARSATEPVPGQLQGLLDRLAEKDAGEPR >Mature_795_residues SETESGPGSVTDADYRNLAETLPQLAWIAEADGTIIWYNQRWYDYTGTSLDEMRGWGWRTVHHPDHVAAVTERYRAAITL GRSWEDTFPLRGRDGSYRWFLSKALPHRDESGRILRWYGTNTDITGRRAVEERLRHSEQRFRALVDASAAVIWNTDAAGE LMPPQVRWSTYTGQTEEAYQGWGWLDAVHPDDRGHAADAWAACVEARATYEVEYRLRRYDGVWRAMEVRGVPVLAEDGSL REWVGTCVDVTERKEAEEAVERARQAAEAANRAKSQFIANMSHELRTPLSAVIGYSEMLGEELEDIGQAALLPDLRKIEA AARHLLSLINDVLDISKIEAGRMTASAETFTVSDLLRDVSDSTGSLVEKKGNRFVLDTGAAGTADLGSMHQDQTKIRQCL LNLIGNAAKFTERGTITLTVRRHREEGADWLSFAVADTGIGLTEEQIGRLFERFVQADDSTTRQFGGTGLGLAITRAFCR TMGGDIGVASTPGAGATFTIRLPATLRPEDAPPSEAEAHTPVEPHEQHETVLLVDDDPAARELLQRFLEREGFHVRSAND GRAGLTLARALKPRAILLDVEMPRMDGWAVLHAVRNDPDLAGTPVIMTSVVAEQGLGQALGATDYFVKPIDWDRLKGLME RYRPEAPEDARVLVVDDDADARERLRRSLGREGWTVDEAENGRIALERVSQARPSLILLDLMMPEMDGFGFLRALRARPD GDVPVVVLTAKEVTAAEKESLNRQADRVIAKGSMSLAEIGRQLRVLYARSATEPVPGQLQGLLDRLAEKDAGEPR
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=527, Percent_Identity=28.4629981024668, Blast_Score=189, Evalue=6e-49, Organism=Escherichia coli, GI145693157, Length=539, Percent_Identity=30.2411873840445, Blast_Score=179, Evalue=5e-46, Organism=Escherichia coli, GI1788713, Length=397, Percent_Identity=30.9823677581864, Blast_Score=172, Evalue=6e-44, Organism=Escherichia coli, GI1789149, Length=252, Percent_Identity=38.8888888888889, Blast_Score=162, Evalue=9e-41, Organism=Escherichia coli, GI87081816, Length=342, Percent_Identity=34.7953216374269, Blast_Score=152, Evalue=1e-37, Organism=Escherichia coli, GI1786600, Length=242, Percent_Identity=35.1239669421488, Blast_Score=115, Evalue=9e-27, Organism=Escherichia coli, GI1786912, Length=298, Percent_Identity=27.1812080536913, Blast_Score=93, Evalue=7e-20, Organism=Escherichia coli, GI1788549, Length=267, Percent_Identity=27.7153558052434, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1786783, Length=240, Percent_Identity=28.75, Blast_Score=83, Evalue=7e-17, Organism=Escherichia coli, GI1788393, Length=239, Percent_Identity=28.8702928870293, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790436, Length=256, Percent_Identity=26.953125, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1788550, Length=114, Percent_Identity=36.8421052631579, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1790346, Length=247, Percent_Identity=25.9109311740891, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790861, Length=254, Percent_Identity=27.1653543307087, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI87082128, Length=237, Percent_Identity=26.5822784810127, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1790551, Length=212, Percent_Identity=28.7735849056604, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1788279, Length=312, Percent_Identity=21.7948717948718, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 88278; Mature: 88147
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETESGPGSVTDADYRNLAETLPQLAWIAEADGTIIWYNQRWYDYTGTSLDEMRGWGWR CCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEECCEEECCCCCCHHHHCCCCCE TVHHPDHVAAVTERYRAAITLGRSWEDTFPLRGRDGSYRWFLSKALPHRDESGRILRWYG ECCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCEEEEEC TNTDITGRRAVEERLRHSEQRFRALVDASAAVIWNTDAAGELMPPQVRWSTYTGQTEEAY CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHH QGWGWLDAVHPDDRGHAADAWAACVEARATYEVEYRLRRYDGVWRAMEVRGVPVLAEDGS CCCCEEECCCCCCCCCHHHHHHHHHHHHCEEEEHHHHHHHCCHHHHHEECCCEEEECCCC LREWVGTCVDVTERKEAEEAVERARQAAEAANRAKSQFIANMSHELRTPLSAVIGYSEML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH GEELEDIGQAALLPDLRKIEAAARHLLSLINDVLDISKIEAGRMTASAETFTVSDLLRDV HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH SDSTGSLVEKKGNRFVLDTGAAGTADLGSMHQDQTKIRQCLLNLIGNAAKFTERGTITLT CCCHHHHHHHCCCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEE VRRHREEGADWLSFAVADTGIGLTEEQIGRLFERFVQADDSTTRQFGGTGLGLAITRAFC EEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH RTMGGDIGVASTPGAGATFTIRLPATLRPEDAPPSEAEAHTPVEPHEQHETVLLVDDDPA HHCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHH ARELLQRFLEREGFHVRSANDGRAGLTLARALKPRAILLDVEMPRMDGWAVLHAVRNDPD HHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCC LAGTPVIMTSVVAEQGLGQALGATDYFVKPIDWDRLKGLMERYRPEAPEDARVLVVDDDA CCCCHHHHHHHHHHHCCCHHCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCC DARERLRRSLGREGWTVDEAENGRIALERVSQARPSLILLDLMMPEMDGFGFLRALRARP HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHCCCCCCHHHHHHHHCCC DGDVPVVVLTAKEVTAAEKESLNRQADRVIAKGSMSLAEIGRQLRVLYARSATEPVPGQL CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHH QGLLDRLAEKDAGEPR HHHHHHHHHCCCCCCC >Mature Secondary Structure SETESGPGSVTDADYRNLAETLPQLAWIAEADGTIIWYNQRWYDYTGTSLDEMRGWGWR CCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCEEEEECCEEECCCCCCHHHHCCCCCE TVHHPDHVAAVTERYRAAITLGRSWEDTFPLRGRDGSYRWFLSKALPHRDESGRILRWYG ECCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCEEEEEC TNTDITGRRAVEERLRHSEQRFRALVDASAAVIWNTDAAGELMPPQVRWSTYTGQTEEAY CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCHHHH QGWGWLDAVHPDDRGHAADAWAACVEARATYEVEYRLRRYDGVWRAMEVRGVPVLAEDGS CCCCEEECCCCCCCCCHHHHHHHHHHHHCEEEEHHHHHHHCCHHHHHEECCCEEEECCCC LREWVGTCVDVTERKEAEEAVERARQAAEAANRAKSQFIANMSHELRTPLSAVIGYSEML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH GEELEDIGQAALLPDLRKIEAAARHLLSLINDVLDISKIEAGRMTASAETFTVSDLLRDV HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH SDSTGSLVEKKGNRFVLDTGAAGTADLGSMHQDQTKIRQCLLNLIGNAAKFTERGTITLT CCCHHHHHHHCCCEEEEECCCCCCCHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCEEEE VRRHREEGADWLSFAVADTGIGLTEEQIGRLFERFVQADDSTTRQFGGTGLGLAITRAFC EEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHH RTMGGDIGVASTPGAGATFTIRLPATLRPEDAPPSEAEAHTPVEPHEQHETVLLVDDDPA HHCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHH ARELLQRFLEREGFHVRSANDGRAGLTLARALKPRAILLDVEMPRMDGWAVLHAVRNDPD HHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCC LAGTPVIMTSVVAEQGLGQALGATDYFVKPIDWDRLKGLMERYRPEAPEDARVLVVDDDA CCCCHHHHHHHHHHHCCCHHCCCCCCEECCCCHHHHHHHHHHHCCCCCCCCEEEEEECCC DARERLRRSLGREGWTVDEAENGRIALERVSQARPSLILLDLMMPEMDGFGFLRALRARP HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHCCCCCCHHHHHHHHCCC DGDVPVVVLTAKEVTAAEKESLNRQADRVIAKGSMSLAEIGRQLRVLYARSATEPVPGQL CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHH QGLLDRLAEKDAGEPR HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]