| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is pncB [H]
Identifier: 170748560
GI number: 170748560
Start: 2284375
End: 2285667
Strand: Reverse
Name: pncB [H]
Synonym: Mrad2831_2142
Alternate gene names: 170748560
Gene position: 2285667-2284375 (Counterclockwise)
Preceding gene: 170748561
Following gene: 170748559
Centisome position: 37.61
GC content: 69.06
Gene sequence:
>1293_bases ATGCTGGATCTGGCGAAGCGAGTCTACGACCACAGCTTCCGCATCGACCCGATCGTGCGGTCGCTGCTCGACACGGATTT CTACAAGCTCCTGATGGCGCAGACGATCCTGCGCCGACACCCCGACATCCGGACCACCTTCGGCATCACCAACCGCACGC GGCGCATCCGCATCGCCGACGAGGTCGATGCCGGTCTGCTGCGCGAGCAGCTCGACCACGCCCGGACCCTGCGCCTCAGC AAGGGCGAGATCACGTGGCTGCGCGGCAACGTCTTCCGCGGCCAGGGACGAATCCTGGGACCCGAATTCGTGAGCTGGTT CGAGGCCTTCCAACTCCCCGAATACGAGCTCGCCGTCCATGACGGCCAGTACGAGCTGACCTTCCACGGTCCCTGGGTCG AGACCACGATGTGGGAGGTCCCGGCGCTCGCGATCCTCAACGAGTTGCGGGCGCGGGCCGTGCTGCGTGGCCTCGGCAAG CTCGACCTGCAGGTGCTCTACGCCCGCGCCATGACCCGGGTCTGGGAGAAGATCGAGCGCCTGCAGAGGCTGCCGGACCT GTCGGTGGCGGATTTCGGCACGCGCCGGCGCCACGGCTTCCTGTGGCAGGACTGGTGCGTGCAGGCGATGGCGGAGGGTC TCGGCGGCGCGTTCCTCGGCACCTCCAACTGCCTGATCGCGGCCCGGCAGGAGGTCGAGCCGGTCGGCACGAACGCTCAC GAACTGCCGATGGTCTACGCGGCGCTCGCCGAGGACGACGCGGCGCTCGCCGCCGCGCCCTACGCGGTGCTGTCGGACTG GCAGGAGGATTACGGCGGCAACCTGCTGGTGATCCTGCCCGACACCTACGGCACCACCGGATTCCTGGCGAACGCCCCGG ACTGGGTGAGCGACTGGACCGGCATCCGCATCGACTCGAAGGACCCGATCGAGGGCGGCGAGGAGGCGATCCGCTTCTGG CAGGCTCGCGGGCACGACCCGCGGGACAAGCTCGCGATCTTCTCCGACGGGCTCGACATCGACGAGATCGAGCGCATCCA CGCCCGGTTCCACGGCCGCATGCGCATCGGCTACGGGTGGGGCACGCTGCTCACCAACGATTTCCGCGGGCTCCTGCCGG AGGGGAAGCTCGACCCGGTCTCGATCGTCTGCAAGGTCACCGAGGCCGACGGCCGGCCGACCGTGAAGCTCTCCGACAAT CCCACCAAGGCGCAGGGGCCGGCCGACGAGGTCGCCCGCTACCGGCGGGTCTTCGCCGTGGGCGAGCAGGAGGCGCTGCC GGTACTGGTGTGA
Upstream 100 bases:
>100_bases TTTCCGCGGGCGGTCTCCGGGAGGAGGCCGCCCGTCTTCTTGACGTCGGCGGTTCCGGCATGCGCTCTGCGCGATCGAAG CGCGGCAGAGTGCCTTACGA
Downstream 100 bases:
>100_bases CGGGCGCACACCACCGGCGGAGGACCCCGGCACCGCCGGCCTCGCGAGCGGAGCGACGTGATGACGGTGAGGGACCCGTC CACCGAAGCGCTCGAGCGGA
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase [H]
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MLDLAKRVYDHSFRIDPIVRSLLDTDFYKLLMAQTILRRHPDIRTTFGITNRTRRIRIADEVDAGLLREQLDHARTLRLS KGEITWLRGNVFRGQGRILGPEFVSWFEAFQLPEYELAVHDGQYELTFHGPWVETTMWEVPALAILNELRARAVLRGLGK LDLQVLYARAMTRVWEKIERLQRLPDLSVADFGTRRRHGFLWQDWCVQAMAEGLGGAFLGTSNCLIAARQEVEPVGTNAH ELPMVYAALAEDDAALAAAPYAVLSDWQEDYGGNLLVILPDTYGTTGFLANAPDWVSDWTGIRIDSKDPIEGGEEAIRFW QARGHDPRDKLAIFSDGLDIDEIERIHARFHGRMRIGYGWGTLLTNDFRGLLPEGKLDPVSIVCKVTEADGRPTVKLSDN PTKAQGPADEVARYRRVFAVGEQEALPVLV
Sequences:
>Translated_430_residues MLDLAKRVYDHSFRIDPIVRSLLDTDFYKLLMAQTILRRHPDIRTTFGITNRTRRIRIADEVDAGLLREQLDHARTLRLS KGEITWLRGNVFRGQGRILGPEFVSWFEAFQLPEYELAVHDGQYELTFHGPWVETTMWEVPALAILNELRARAVLRGLGK LDLQVLYARAMTRVWEKIERLQRLPDLSVADFGTRRRHGFLWQDWCVQAMAEGLGGAFLGTSNCLIAARQEVEPVGTNAH ELPMVYAALAEDDAALAAAPYAVLSDWQEDYGGNLLVILPDTYGTTGFLANAPDWVSDWTGIRIDSKDPIEGGEEAIRFW QARGHDPRDKLAIFSDGLDIDEIERIHARFHGRMRIGYGWGTLLTNDFRGLLPEGKLDPVSIVCKVTEADGRPTVKLSDN PTKAQGPADEVARYRRVFAVGEQEALPVLV >Mature_430_residues MLDLAKRVYDHSFRIDPIVRSLLDTDFYKLLMAQTILRRHPDIRTTFGITNRTRRIRIADEVDAGLLREQLDHARTLRLS KGEITWLRGNVFRGQGRILGPEFVSWFEAFQLPEYELAVHDGQYELTFHGPWVETTMWEVPALAILNELRARAVLRGLGK LDLQVLYARAMTRVWEKIERLQRLPDLSVADFGTRRRHGFLWQDWCVQAMAEGLGGAFLGTSNCLIAARQEVEPVGTNAH ELPMVYAALAEDDAALAAAPYAVLSDWQEDYGGNLLVILPDTYGTTGFLANAPDWVSDWTGIRIDSKDPIEGGEEAIRFW QARGHDPRDKLAIFSDGLDIDEIERIHARFHGRMRIGYGWGTLLTNDFRGLLPEGKLDPVSIVCKVTEADGRPTVKLSDN PTKAQGPADEVARYRRVFAVGEQEALPVLV
Specific function: NAD biosynthesis; nicotinamide to NaMN; second step. [C]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Escherichia coli, GI1787162, Length=396, Percent_Identity=31.5656565656566, Blast_Score=184, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6324783, Length=432, Percent_Identity=29.1666666666667, Blast_Score=171, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006406 - InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 48588; Mature: 48588
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLAKRVYDHSFRIDPIVRSLLDTDFYKLLMAQTILRRHPDIRTTFGITNRTRRIRIAD CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEHH EVDAGLLREQLDHARTLRLSKGEITWLRGNVFRGQGRILGPEFVSWFEAFQLPEYELAVH HHHHHHHHHHHHHHHEEEECCCCEEEEECCEEECCCCEECHHHHHHHHHHCCCCEEEEEE DGQYELTFHGPWVETTMWEVPALAILNELRARAVLRGLGKLDLQVLYARAMTRVWEKIER CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LQRLPDLSVADFGTRRRHGFLWQDWCVQAMAEGLGGAFLGTSNCLIAARQEVEPVGTNAH HHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCCCCCCCH ELPMVYAALAEDDAALAAAPYAVLSDWQEDYGGNLLVILPDTYGTTGFLANAPDWVSDWT HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHCCCC GIRIDSKDPIEGGEEAIRFWQARGHDPRDKLAIFSDGLDIDEIERIHARFHGRMRIGYGW CEEECCCCCCCCHHHHHHHHHHCCCCCHHCEEEEECCCCHHHHHHHHHHHCCCEEEEECH GTLLTNDFRGLLPEGKLDPVSIVCKVTEADGRPTVKLSDNPTKAQGPADEVARYRRVFAV HHHHHCCHHCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHC GEQEALPVLV CCCCCCCCCC >Mature Secondary Structure MLDLAKRVYDHSFRIDPIVRSLLDTDFYKLLMAQTILRRHPDIRTTFGITNRTRRIRIAD CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEHH EVDAGLLREQLDHARTLRLSKGEITWLRGNVFRGQGRILGPEFVSWFEAFQLPEYELAVH HHHHHHHHHHHHHHHEEEECCCCEEEEECCEEECCCCEECHHHHHHHHHHCCCCEEEEEE DGQYELTFHGPWVETTMWEVPALAILNELRARAVLRGLGKLDLQVLYARAMTRVWEKIER CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LQRLPDLSVADFGTRRRHGFLWQDWCVQAMAEGLGGAFLGTSNCLIAARQEVEPVGTNAH HHHCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCCCCCCCH ELPMVYAALAEDDAALAAAPYAVLSDWQEDYGGNLLVILPDTYGTTGFLANAPDWVSDWT HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHCCCC GIRIDSKDPIEGGEEAIRFWQARGHDPRDKLAIFSDGLDIDEIERIHARFHGRMRIGYGW CEEECCCCCCCCHHHHHHHHHHCCCCCHHCEEEEECCCCHHHHHHHHHHHCCCEEEEECH GTLLTNDFRGLLPEGKLDPVSIVCKVTEADGRPTVKLSDNPTKAQGPADEVARYRRVFAV HHHHHCCHHCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHC GEQEALPVLV CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA